Lhet006923.1
Basic Information
- Insect
- Leptopilina heterotoma
- Gene Symbol
- POGK
- Assembly
- GCA_015476425.1
- Location
- JABAIE010000201.1:19534-21078[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-09 3.3e-06 28.3 0.1 1 38 19 56 19 61 0.95 2 2 1.3 1.8e+03 0.3 0.0 13 22 133 142 133 145 0.90
Sequence Information
- Coding Sequence
- ATGCCACGAATTTATAAGCGAAAAGTAGGTGTAGTACCACGGACAGTAACGTGGACTGAGGAAGCACTGACAAAAGCTATAAAGGCAATTGAATCAAATAGTATGAAAACAAAGACAGCAGCAAAGCAGTTTGGTATTCCGTCCCGCACATTACGTAGACGCTTGAAAAACGCAGACTTAACAAAACATAATTTGGGAAAAGGACCCATTCTAGGATACGAAAATGAAAAAAAATTAGTTGACCATATAAAAAATCTCGAGAAAGCTGGATTTCCTTGCACTCGTATGGATATTCGGAGAATGGCATATCAGCTAGCCGTGAAGTTGAAAATATCACACAATTTCAACGAGGTTACAAAATTGGCCGATAAGCAGTGGCTGTTGTCATTTTTAGAAAGAAACAAGCAATTAAGTGTCAGGCAAGCTGAAGGAATATCTCGTGCACGACCCGTGGGATTCAATAGAGAGGAGATAGGAAAATTTTTTGACTTGTTGGAACATACCCTAATAACCAACGATGTAATAGGAAAACCAAAACGAATATTCAATATGGACGAAAGTAGAGTTCAAATGAACAACAAACCCGAGAAAGTTGTGGTCACTAAAGGTGCCAAATTAGTACAACAAGTTACTTCGAGTGAAAGAGGAGAAACCATATCTGTTGTTGCTTGTAATAATGCGGAAGGTAGATTTTTGCCTCCAATCATCATACTAAAGGGAGTATACAAAAAAGACGAATTTCTGGATGGACTTCCGCCAGGATCCGATGCTTATATGAATAAAAAGTCTGCCTACATCAACACAGATCTATTTTATAAATGGCTGACAGAACATTTTATTCCACGAAAGCCTGCAGGTAAAGTTTTATTAATTCTCGATGGACATTCTTCGCACACTGTCAGCCTGAACACTCTGGAAGTAGCTAAAGAGAATGACGTGATTCTTCTTGGCCTTCCTAGCCATTCAACTCATGGTCTTCAACCTTTGGATAAATCGTTTTTTAAACCTTTCAAAACATATTTTTCAAGTGAACTGAGAAATTGGATGATAAACAATAAAGAAAAGAGAATTAACAGGTATCAATCTGGTAAACTGATTGGTTCTGCATGGATTCGTGCTACCACTCCCTCAAATGCTATAAATGGCTTCAGAGCTTGCGGCATTCATCCATTTAATCCAAACATTATTCCCGATCACTATTTTGAGATTTCTGATGCAGCCAATAGATCAGTTGACACCGAGACTTTGGAAGAAGCGACTGGTGACATACCCGACGTTGAAAATGTACCTGCACCATCAGCAAGCCAATGTGATAATCCGGCAAAAATATTATCTGTGATAAATCCAGTGCCCGTTGTGTTAAACGTACGTTCCAAACGACAGAAGCAAGGGTCCAAAATTCTAAACGATGTTCAAGAAATACAAAAAAACGAAATAGAGAAGTGGAGATTCTTAAAAAAATGA
- Protein Sequence
- MPRIYKRKVGVVPRTVTWTEEALTKAIKAIESNSMKTKTAAKQFGIPSRTLRRRLKNADLTKHNLGKGPILGYENEKKLVDHIKNLEKAGFPCTRMDIRRMAYQLAVKLKISHNFNEVTKLADKQWLLSFLERNKQLSVRQAEGISRARPVGFNREEIGKFFDLLEHTLITNDVIGKPKRIFNMDESRVQMNNKPEKVVVTKGAKLVQQVTSSERGETISVVACNNAEGRFLPPIIILKGVYKKDEFLDGLPPGSDAYMNKKSAYINTDLFYKWLTEHFIPRKPAGKVLLILDGHSSHTVSLNTLEVAKENDVILLGLPSHSTHGLQPLDKSFFKPFKTYFSSELRNWMINNKEKRINRYQSGKLIGSAWIRATTPSNAINGFRACGIHPFNPNIIPDHYFEISDAANRSVDTETLEEATGDIPDVENVPAPSASQCDNPAKILSVINPVPVVLNVRSKRQKQGSKILNDVQEIQKNEIEKWRFLKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00882868;
- 90% Identity
- iTF_00882868;
- 80% Identity
- -