Lhet009275.1
Basic Information
- Insect
- Leptopilina heterotoma
- Gene Symbol
- TIGD6
- Assembly
- GCA_015476425.1
- Location
- JABAIE010000120.1:1050902-1052191[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.5e-10 6.1e-07 30.6 0.0 2 42 18 58 17 60 0.87
Sequence Information
- Coding Sequence
- ATGCCTAATAAATATCAAAGAAAAATCACTAATGTGAGAGCCGAGTGGAGTGAACAGTCTTTAAAATTGGCCATACACGCTGTGAAAAATGAAGGAATATCAGTTTACGCGGCTTCTAACATGTACCAAATTCCACGGAAAACCTTAGAGAGACGTGTTAAGAATGGCAATGATAAAAAAGGGCCTTTAGGACCGGCTTCTATCTTTGGGGAAGTAAATGAGAGCAAACTGGCTTCTCATATTATAAACTTACAGGAAAAAGGATTTCCTTTAACTATTAATGATGTAAGAACAATAGCCTTCAAGTTTGCGGAACAGTTAAATTTAAATCACCGATTTAATAAAGAAACTGAACAGGCAGGTTATGATTGGTTGAATTTATTTTTAAATAGAAATAAAGGAATTACTTTAAGAAAATCCAAAGGAGTTTCCTTAGCGAGAGCCAAAGCGATGAACCGTTTGGAAGTGAATGAATATTTTAATCTTCTTGAGAAAGTTTTACTAGACAAAAATGGAATACTGACGCCAAATCGAATTTTCAATATGGATGAAACAGGCCTACAGTTAAACAATCGTCCTGGATATGTGCTTGCAAAAAAGGGTTCAAAAGCGGTGTCTACTGTAACATCAAATGAAAAAGGAGAGACAATAACTGTAATAGTTTGCTGCAATGCTGAAGGAACGTTTTTACCACCCGCATGCATTATGAAAGGTAAAAATAAAAAAGCAGAATTTGAAGACGGAATGCATTCTGGATCAATCCTATTCATGTCTCAAAAATCAGCATATATAACATCAGATATATTTCTAGAATGGCTAAAAATTCATTTTGTTCCACGAAAACCAGCTGGAAAAGTAGTTCTTTTGCTAGATGGTCACTCAACTCATTGCAATTCTGTGGAAATGTTGGAGTACGCAAATCAAAATGATATAATTTTAATATCAATGCCTAGTCACACATCTCATTTTCTTCAACCGTTAGATCGTTCGGTATTTAAATCCTTGAAGACTCATTTTTATGAACAATGTCGACTTTGGCTGCATCAACATCCTAATCGTCAAATTAAGAGATCGTTCTTCGGAGAACTACTTAACAAGGCTTGGATAAAAGCTGCTACACCAGGAAATGCAATTTCTAGCTTTAAAGCAACAGGAGTGTTTCCTTTCAATCCAGCAGTAATTCCAGACCATGCTTTCTTTGAAGGATTTGCAGATTCTGAAAGTCAAAATATTACTGAAGTCACCACTGCTGTTCAGATTCCAGTTGACGTAAATCAGTCAATCTCTTAG
- Protein Sequence
- MPNKYQRKITNVRAEWSEQSLKLAIHAVKNEGISVYAASNMYQIPRKTLERRVKNGNDKKGPLGPASIFGEVNESKLASHIINLQEKGFPLTINDVRTIAFKFAEQLNLNHRFNKETEQAGYDWLNLFLNRNKGITLRKSKGVSLARAKAMNRLEVNEYFNLLEKVLLDKNGILTPNRIFNMDETGLQLNNRPGYVLAKKGSKAVSTVTSNEKGETITVIVCCNAEGTFLPPACIMKGKNKKAEFEDGMHSGSILFMSQKSAYITSDIFLEWLKIHFVPRKPAGKVVLLLDGHSTHCNSVEMLEYANQNDIILISMPSHTSHFLQPLDRSVFKSLKTHFYEQCRLWLHQHPNRQIKRSFFGELLNKAWIKAATPGNAISSFKATGVFPFNPAVIPDHAFFEGFADSESQNITEVTTAVQIPVDVNQSIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -