Basic Information

Gene Symbol
JARID2
Assembly
GCA_015476425.1
Location
JABAIE010000092.1:7395531-7406354[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5e-22 4e-18 67.2 0.0 6 89 1344 1425 1340 1425 0.94

Sequence Information

Coding Sequence
ATGGTATTGAGTCGAAATGATAAGAGGAAAAGAAAAGAAGGAGATCTCGTGGACCTCATGGATCCATTGTCGGATTCACCGAAAAGGACCAAAATTCATGCACAAAGAAAATTTGCACAGGGAGCTGCGACATTTTACAGTCCATCCACGACTCCTGTTAAAGAAAAGGAGAAAGAAAAATCAAAACCAGCTGTTATTAATGAATTGATAAGTCACAAGCGACCGAATACGGAAGATTTTTTAACATTTCTTTGTTTCAGAGGAACATCGATATTACCGTCGAGTTTGAATTTTTTCAACGTTTGTGTCAAGAAAGAAAAAAGTGATTCAAAAACAATAAAAAATTTAAAAGCAACTTCTTCCACTTCAAAACCAAGAAACACCGAATCCACAAAATCCGATCCGTCCCAAAAGGCAGCAAAATCAAAAAATGTAAAAGAATTCCCGAATGGATTAAAAAATACGATTAAATTTAAAACGAAAACCTCGACAGTTCAGGCGCTAAAGAGAAAATATCAAGAGCAACGATTGGCGAAGCAGAGAATTAAAAATAAAATCAGAACCTCTTATGTTATACGAACACGTTCGAATACAGAGAAAAATGTCAAGAAACCAACAACACTGAATAAATTATCATCGAGAAAATTCACAAAAACAGAGAGTAAACGACATGGTCTTCGTAGTGGCGGTCTCATCGAACAAATTTGCAATCCGAAAATAATTCCCAAAAATAAACGAACAAAAGCAAAGAAGGGCTTTGGGAAAAATAAAAATAACTCAAAAGACGATTCTCTCGATTCAGATTCAATGTCAAATGACGAGGAATTAAAATCCCCGAGTAATAAGAAAATCACAGCTAAATCCCTACCGAAGAAAATTGGAACAAGAAAAACGGAATTACGTCGAGTGACACGCTCATTTGTCGAGACGAAATCAACACAAAATTTATCTCGTCGACCAACGAGGAAAACAAAAGAAGCCGCGGCGGTTTACATGGAAATTTTGGGACGTAAACTAGTGAGTCCCGATTTAGAAAATGAGGACGATATTTCACTCGATAGTTTTCCGGAATTGCCAAATTCACGGCGAATCCTGAAAGAGGAATTCGAAATCAAGGAGAAAGTGAAACAAAACGCAAAGACGGCCGCCAAAGAAAAGGATATAAAACTCGAAACCAGCACTTTGAGTAGCAAGCGAATCGATAAACTGAACCGAACTGTAAGAACAGTCCTCAAAAGTAAACGTATCGTCAAAGTTCAAAAATACTGCGAATTAGAAACTGACGAGGAGAGCGAAATTTCTTGTGAAAGTGAAAAAAGTGGCAAAACAAGACCAATGACCCGAAGAAGTTTAAATAAAACAAAACCAACGAATAGAAGTCTAAGATCGTCGGCGAGAAATCTCTCCCTGAAACTAAAAGTCGAAAGTTGTCAGGTCAGGAAATTTATTAACAAAAAGGAGAAAATTTTACTCAAACGAAAGCAAATTGACGAGAAGAGTCTCGAGACGAAAATTGAAAAGAATCTCGAGACGAAAATTGTCGAGAAGGAAACGAAAATTGTAGAAAAGGAAACGAAAATTGAAAAGAATTTCGAAGCAAAAATTGAAAAGAATTTCGAGGCGAAAATTGAAAAGAATTTCGAATCGAATATTGAAAAGAATTTCGAGACGAAAATTGAAGAAAAGGAAAAAGAAGAAAACTTGAAAGTGAAAGAAAAGCAGACGAACGAGAGTCGGAAACGGAACGAAAATTTGAAAGGAGAAATAAAGAGCGAAGAGATTAAGAGACAAAAGTCAGAGGACGAACGGGAAAGTAAGAGGCAAAAATTAGAGGAAGAAATAAAAATCGACAATGAAGAGAAAGAAAAAGAAGAATCGGACGAAGAAACATTGGGTTCACTGCTGAGTAAAATAAAACGAAAACGAGAATCCGACGACGATTTAACCAAGTCGGTGAAAATTCTCAAAGAAGTGAAAGAGTCGAAAATGTCCGACGACGAGGAATCATTCCGCGGTTTCACGAAGAAGGCAATATCGAAGGTACTCGACAAACTCGACACCTGTCAATCGCACGTGAATTCAAATCTCCTCGTGAGCGACAGCATCGAATCAAAATCAGTCCAAGTCTCCTCGATTTCTCCCCTCGAGTCACCGAATCTAGACAAAAATTCGCCGCAAAAAGAAGAAAGCACAAAAATTCAATTAGAAAAATCATTTTACGAACCAAAAATTGAAAAGGAAGTTGTCTTCGAAAAAGAAAATGAAAAAGAAGAAGAGAAAGAGATAAAAATTATCGACATGCCGTCAACAACAACAGGTCGTAAGGAACGTGTCAATATGTCAGCAGAACAAATCGAAAAATGGCTCACAGAAAGTTCAATAGCAAAGGAAGAGAATAAAGTCGATCTCGAAACAAGTTACAATTACGAGAAACCAAAAATCTCCCATCATTTGTCAATTTCCTCAAAAATTCAACATCTCGTCAGACCCGTTAACGTAACCCTAGCGAAATTGCACGATAAATCAAAAGCACAAAAGCTATTTGTAAAAAATACAACTCTTGTTGTGAAGAGTTGTGACCCAGCTGGGGAATCGATAAAAATCCCTCAACTAAAGACACCGAAGGAGAGTCCCGATGACGATGTTTCGAAATCGGATCACTCGCCCGAGGAGAATTCCGAAAAGAAAGAGAAGAAACAAACGCAGAGAAAATTATTCCTACCAAAAGTAAAGGAACGAAAGTCCACGACCCCGAGTGCAAATGCCTTCTCACCGGAGAACGAAAGCAGTGTCTATGCTTTTGAAAGTGATACGGAGACGCCAATCAGCACCCCGTTTAGAAGAAAAAATAAAGACGTCACTGTCTTTAATCAGAAGGACGAGCAAACTGGGGAAATTTACGAGAAACAAGAGAAAATGTCCGAGAAAAATGAAAAAACGTCTGAGAAAAATGAGAAAACGTCCTTGGAGAAAATTGAGAAAACTTCCGAGAAAAATGAGAAAACGTCCTTGGAGAAAATTGAGAAAACGGTGGAGAAAATTGTCGACAAGAAGGAGAACACGACCAACAGTGATTTGAAAGGTTTTCCGAATCTGGCAAATATACAAGTTCTCTCGCTGGATAAATTGACGACAAATTGGAGTAACGTGAATTGTAGTGCGTCAATAGCGGTGCAGGTGAATTTGGATCAGAATCAAAAGCAACAGAATCAGAATGACGAGAGTGAGCAGACGAGTATGGAGATATCGACGCAAACCGAGAGGGGAAATGATAATGACGATGACAATGACAATGATGGACAGTTGTTTTACATTCCATTGCAAGCGGTGACGAGAAATGGCTCGAATTTGGTGCAGGGACAGCAATTGATTCAGGGAGTGGCGGTGAAATTGGGAACTGAGGGACCAACGGGACCAAATCAGAGGGTTTTGTTGAAGGCGAAATTAGTGACGAAACCAACGTTAACTGTGGCACGTGTTCCTCCGGTGGGAACTGTTCAACCAACTGCACGAGCACCGCCAATTCCATCGACTTCGAGTGCTGATTATCCTGTTGCTTCGACATCGACATTGGTGGGGAATTCGCAAATTCAGACGATTAGTAAGGAGAATAGTAATGTTGCGACGAGTGGAACGGAGAAAATTACGAAGACGACGAAAGTTGCTCGTGAGAGGAAAATATCGGCAGAGTCGGCTAAACTTGGAAAAAGATTCCAAGGCAAATCGAAGCAGAAAATAATAGAAGTCTGCACGCCAATAAATACGACAACATTCCCAGGAACAAAGGATCCAAATGAAGAGGCACGTCTCGTTGAAGCGCCAACATTTCATCCATCGGAGAAAGATTTTCAAGATCCCCTCGAGTACATCGACAAAATACGTCCAATCGCTGAGAAATTTGGCATTTGTCGAGTCATTCCACCGCCAAATTTCAAACCCGATTGTAAAGTATCGGACGATATGCGTTTCACAGCGTACAATCAATACGTTCATCGAATGCTCCATCGTTGGGGACCGAATGTCAAGGAAATGATGGCAATACGCAAATATTTGGCCACGCAAAGTATAACATTAAATCATCCGCCTTGGATTGGTGGAATGGAAGTTGATCTTCCCCATTTATATCAAACAGTTCAATGTCTCGGCGGTCTAAAGGAGGTGATTGAGAAGAAAAAATGGCAAAAAGTTGCTGACGGAATGAAAATACCACGCTCGGCACAGGATCGCGTTACCAAATTGGACGATATTTACTGCAAATATTTATTGCCCTACGATACACTTTCGCAGGGCGAAAGAGATAAATTGTTTGAGGAAGTTGAATTGGAATGGACGAATCGAGAGGCGAAGGGGTTATTGAGATTGGAGTCGCAGTCGATGTCGAATGATAATAATGATGATGAGGAGGATGACGATAGTTCGGAGGAAATTGAGGAGTGTATCGTTAAGGGACGAAATATGCCGCTTAATGCATTTTATCGTATCGCGAGGAATACGCAGAGAATGTGGTTTGCCGATAATCAAAGAACATTGAATGAAATTGAAGGCGCTTCGGCGGCTGATGTTGAGAATGCTTTTTGGAAACATGTCACTGAGAGGAAGCGTCATGTTTGCGTTCACGCTGCGAGTATCGATTCAAGTGGTCGGGGTTTTGGTTTCTCTGTTGCCAAGAACAGTCCCTTTGCGCGACATCCTTGGAATTTGAAAATTCTCACTAATAATGCTGGATCTGTGCTCAGAGCTTTGGGTCCTTTAATGGGTGTGACAGTGCCGACACTTCACGTGGGAATGTTATTCAGCGCTTGTTGTTGGTATCGCGATCCCCACGGTCTACCTTGGATAGAATATTTACACACTGGTGGGAAGAAAATTTGGTACGGCATTCCCGATGAGCATAATAATAATTTTAGAAATGCACTTGCAAAAATGGTGCCACGTTATTGCAAGAATAAAACAATATGGTTACCGTCTGACACTGCAATGGTACCGCCAGAATTGCTCGTTAAAAATGGAGTTCCCTTGTGTCAAACTGTTCAGGAACCTGGACAATTTATCGTCGTATTCCCAAAAGCATTTACTTCAAGCATTTGCACCGGTTATGTTGTCTCGGAAAGTGTTTATTTTGCTCAATCCCCATGGCTCGAGGCCGCCGAACAAGTATTTAAGGATATACAAGATAGTTGCGAACCATCTATATTTTCTTTGGAGAAATTACTCTTCAGTATTATTAACGATACGAGATCGCATATCGATGTTTTGAAACAGATATTACCAACGGTGAAGAGAGTCTGCGAGAGGGAAATTGATTTTCGTCGACAAATAAAAGCACTGGGTTTGACAAATACGGAAAAACTGCCAACGCCCGAAAGTGGCAAGAGAGGAAAGAGCAAGAAGGTGAAGGAAGAGGACGGCGATTTTGAATGTGAAACATGTCGATCAAATTTATTTGTTTCGTTAGTTAATAATTCACAAGATGACAGTATGTATTGTCTTCCACACGCGATTCAACTTTTAACTAGAAAAAAGCAGATAATGAAAAATTGCTGTCTTATGATTGCATATAGCGAGGATGAATTGGACGATTTAATTCACAAACTAGAAGACAGAATTGAAGCGAAATCCAAGAAGAATTACTCCTTTAAGCAAAAATAA
Protein Sequence
MVLSRNDKRKRKEGDLVDLMDPLSDSPKRTKIHAQRKFAQGAATFYSPSTTPVKEKEKEKSKPAVINELISHKRPNTEDFLTFLCFRGTSILPSSLNFFNVCVKKEKSDSKTIKNLKATSSTSKPRNTESTKSDPSQKAAKSKNVKEFPNGLKNTIKFKTKTSTVQALKRKYQEQRLAKQRIKNKIRTSYVIRTRSNTEKNVKKPTTLNKLSSRKFTKTESKRHGLRSGGLIEQICNPKIIPKNKRTKAKKGFGKNKNNSKDDSLDSDSMSNDEELKSPSNKKITAKSLPKKIGTRKTELRRVTRSFVETKSTQNLSRRPTRKTKEAAAVYMEILGRKLVSPDLENEDDISLDSFPELPNSRRILKEEFEIKEKVKQNAKTAAKEKDIKLETSTLSSKRIDKLNRTVRTVLKSKRIVKVQKYCELETDEESEISCESEKSGKTRPMTRRSLNKTKPTNRSLRSSARNLSLKLKVESCQVRKFINKKEKILLKRKQIDEKSLETKIEKNLETKIVEKETKIVEKETKIEKNFEAKIEKNFEAKIEKNFESNIEKNFETKIEEKEKEENLKVKEKQTNESRKRNENLKGEIKSEEIKRQKSEDERESKRQKLEEEIKIDNEEKEKEESDEETLGSLLSKIKRKRESDDDLTKSVKILKEVKESKMSDDEESFRGFTKKAISKVLDKLDTCQSHVNSNLLVSDSIESKSVQVSSISPLESPNLDKNSPQKEESTKIQLEKSFYEPKIEKEVVFEKENEKEEEKEIKIIDMPSTTTGRKERVNMSAEQIEKWLTESSIAKEENKVDLETSYNYEKPKISHHLSISSKIQHLVRPVNVTLAKLHDKSKAQKLFVKNTTLVVKSCDPAGESIKIPQLKTPKESPDDDVSKSDHSPEENSEKKEKKQTQRKLFLPKVKERKSTTPSANAFSPENESSVYAFESDTETPISTPFRRKNKDVTVFNQKDEQTGEIYEKQEKMSEKNEKTSEKNEKTSLEKIEKTSEKNEKTSLEKIEKTVEKIVDKKENTTNSDLKGFPNLANIQVLSLDKLTTNWSNVNCSASIAVQVNLDQNQKQQNQNDESEQTSMEISTQTERGNDNDDDNDNDGQLFYIPLQAVTRNGSNLVQGQQLIQGVAVKLGTEGPTGPNQRVLLKAKLVTKPTLTVARVPPVGTVQPTARAPPIPSTSSADYPVASTSTLVGNSQIQTISKENSNVATSGTEKITKTTKVARERKISAESAKLGKRFQGKSKQKIIEVCTPINTTTFPGTKDPNEEARLVEAPTFHPSEKDFQDPLEYIDKIRPIAEKFGICRVIPPPNFKPDCKVSDDMRFTAYNQYVHRMLHRWGPNVKEMMAIRKYLATQSITLNHPPWIGGMEVDLPHLYQTVQCLGGLKEVIEKKKWQKVADGMKIPRSAQDRVTKLDDIYCKYLLPYDTLSQGERDKLFEEVELEWTNREAKGLLRLESQSMSNDNNDDEEDDDSSEEIEECIVKGRNMPLNAFYRIARNTQRMWFADNQRTLNEIEGASAADVENAFWKHVTERKRHVCVHAASIDSSGRGFGFSVAKNSPFARHPWNLKILTNNAGSVLRALGPLMGVTVPTLHVGMLFSACCWYRDPHGLPWIEYLHTGGKKIWYGIPDEHNNNFRNALAKMVPRYCKNKTIWLPSDTAMVPPELLVKNGVPLCQTVQEPGQFIVVFPKAFTSSICTGYVVSESVYFAQSPWLEAAEQVFKDIQDSCEPSIFSLEKLLFSIINDTRSHIDVLKQILPTVKRVCEREIDFRRQIKALGLTNTEKLPTPESGKRGKSKKVKEEDGDFECETCRSNLFVSLVNNSQDDSMYCLPHAIQLLTRKKQIMKNCCLMIAYSEDELDDLIHKLEDRIEAKSKKNYSFKQK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00882738;
90% Identity
iTF_00882738;
80% Identity
-