Basic Information

Insect: Leptopilina drosophilae
Gene Symbol: -
Assembly: GCA_032873175.1
Location: CM065486.1:5156931-5167843[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 2.4 4.9e+02 2.8 4.7 2 23 360 382 360 382 0.96

2 19 0.044 9 8.3 2.1 1 23 454 476 454 476 0.98

3 19 0.42 85 5.2 0.2 1 23 525 547 525 547 0.97

4 19 0.0096 1.9 10.4 0.2 1 20 582 601 582 603 0.94

5 19 0.0095 1.9 10.4 1.4 2 23 644 665 643 665 0.94

6 19 0.00042 0.084 14.7 0.1 1 23 713 735 713 735 0.97

7 19 1.2e-06 0.00024 22.7 0.2 2 23 766 788 765 788 0.96

8 19 0.00012 0.024 16.4 0.6 3 23 796 817 794 817 0.95

9 19 4.7e-05 0.0095 17.6 0.1 2 23 825 847 824 847 0.95

10 19 3.7e-05 0.0075 18.0 1.1 1 23 855 877 855 877 0.93

11 19 0.39 80 5.3 0.2 2 19 913 930 912 931 0.94

12 19 0.00025 0.05 15.4 0.1 3 23 945 965 944 965 0.96

13 19 0.018 3.6 9.5 2.9 1 23 979 1001 979 1001 0.97

14 19 0.00022 0.045 15.5 1.1 3 21 1022 1040 1020 1041 0.93

15 19 0.6 1.2e+02 4.7 0.9 2 23 1059 1081 1058 1081 0.90

16 19 0.00019 0.038 15.7 0.4 2 23 1102 1124 1101 1124 0.94

17 19 0.0076 1.5 10.7 1.1 1 23 1130 1154 1130 1154 0.94

18 19 0.74 1.5e+02 4.4 2.9 1 23 1159 1182 1159 1182 0.91

19 19 0.6 1.2e+02 4.7 0.6 2 23 1215 1237 1214 1237 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	2.4	4.9e+02	2.8	4.7	2	23	360	382	360	382	0.96
2	19	0.044	9	8.3	2.1	1	23	454	476	454	476	0.98
3	19	0.42	85	5.2	0.2	1	23	525	547	525	547	0.97
4	19	0.0096	1.9	10.4	0.2	1	20	582	601	582	603	0.94
5	19	0.0095	1.9	10.4	1.4	2	23	644	665	643	665	0.94
6	19	0.00042	0.084	14.7	0.1	1	23	713	735	713	735	0.97
7	19	1.2e-06	0.00024	22.7	0.2	2	23	766	788	765	788	0.96
8	19	0.00012	0.024	16.4	0.6	3	23	796	817	794	817	0.95
9	19	4.7e-05	0.0095	17.6	0.1	2	23	825	847	824	847	0.95
10	19	3.7e-05	0.0075	18.0	1.1	1	23	855	877	855	877	0.93
11	19	0.39	80	5.3	0.2	2	19	913	930	912	931	0.94
12	19	0.00025	0.05	15.4	0.1	3	23	945	965	944	965	0.96
13	19	0.018	3.6	9.5	2.9	1	23	979	1001	979	1001	0.97
14	19	0.00022	0.045	15.5	1.1	3	21	1022	1040	1020	1041	0.93
15	19	0.6	1.2e+02	4.7	0.9	2	23	1059	1081	1058	1081	0.90
16	19	0.00019	0.038	15.7	0.4	2	23	1102	1124	1101	1124	0.94
17	19	0.0076	1.5	10.7	1.1	1	23	1130	1154	1130	1154	0.94
18	19	0.74	1.5e+02	4.4	2.9	1	23	1159	1182	1159	1182	0.91
19	19	0.6	1.2e+02	4.7	0.6	2	23	1215	1237	1214	1237	0.93

Sequence Information

Coding Sequence: atgaaCGAAGTCGAGGAGTTGCAGGGCCTCGAAAGTGCCTGTCGACTTTGTTTAACAACCGATGAAACGAGATCTTCCATATTCGGTGCAGCCTACAATGTAGATCCGTtgattgtgaaaataaaaaattgcctGTCTCTTCAAatTTCACAGGAGGACAAATTGTCGACATTAATTTGCATTACTTGCGTTAATAAAGTGAATCAATGGCATCAGTACAAGAAGGATTGCCTTCAGTCTCAGGACAAATTATTAGAATGGCTCGAAAAACAATCGGAACCACTTCCGATTGTTACCGTAAAGAAAGAAGTAGTCGAAGATTCCGCAGAAAGTGAAGAAGTTGAGaagATTTCCGAAACACAATTAACAAACTCGAAGGAAATTGCTCCCGAGATAAATGAAAATACGGGGAAAAATTCCGAAGCACAAACAAATAGTAGAGAAAATCCAATAGATGAAAATAACGAaggaaatttgcaaaaaaatgatgaaacgattttacaaaaaaatgcggAGAAAAATTCCGAAACTGTAGAGAAAATTACGACGAATTTGGAGaagaaaaattctgaaaatgcGGAGAAAAGTTCGGAATGTACGGAGAAAAGTGTGCAAAACGGTGAGAAAAGTGGAGAAAATGGAGAAGATACGGAAAGTGGGGAAAGTTCGGAAAGTAAAGAAAGTAGAGAAAATATGGAGAAAACGGGAGCAAATGCGGAAAAAATGGACGAAAATGCGgaaaaaatggataaaattgaaagtatgagAAAACTAATGCTAAGAGAAAAGGAGCCGAAGGAAGATGAGAAACAAATGGAAATCGAAACGGAGAAACGTGAGAGAAATAAACGACGATTGTCGAATGATTTAGAGAATGATTCGGTGAAACGTTTCAATCCACTGCCGATAAAGACGGAACCAATCGACGACACGGAAATGGCACTCGACGACGACGCTAGCAACAGTACCATCGGAATTCCCCTCGAGGCTCAGCAAATTAAAGTTCTCAACAAGGGCAAAAAGAAAATACGCCGCGGACCGCACACACATTTCCGTGGGGCTAGAATTTTCAAACGCAAATGCCTTCACTGTCAGATTAATTTGCACTCAAAGACTTCTTACGCCAAGCACATGGCGCGTTTTCATTCGAAAGTGCATCAAAAAACGGGCGGAATGGTCGAAACGGGAATCGAAACAGGAATCGGAACGGGAATGGGAAGAGGAATGAGAAACCGGGTGAATTCGGAGATCGAGGAGACTGAGGAATTGATCGAGGACGTCGAGGAGGAGCTGGAGAATCTCGAAGAAGACGCGCCGTTAACGCCAGTGCAACAGAACATCATCAGTCAATTGAAGACCTACACCTGCTACTCTTGCGAGCAATCGTTTCAAGATCGTCGCAGTACTTTGAATCACATTCGCCAGCACATGCCGGACCTGCGAACCTTCACCTGCGTCGCATGCCTCACGGAATTCGGCGATCAAGGAACCTACAAAGAGCACTGCGAGGAGAGTTTCGAGTGCGCGATGAAAATCGCCCTGGTGATTCCGATCCAAGGCACCGAGAAGTACTTCACCTGTAACATGTGCCTACTACCCATGGCCAATCGTAAGGAACTCCTCAGTCACCTGGCGAAACACTCCGACAAACAGTACGAAGAGCTAATGGCCCCACCGCCCAAGCTCACCCCAATTGTCACCGTCAACTCCCTGCCCTACGGAATGGGCGATCCGGCCTACAATCACGAGTGCGATCTCTGCGGAATGATCTATCGCTACAAACCAAATATGATAAAACACAGGGAGCTTTGCGCCAGTCTTCAGCCCGAGGGTCGAACCTCCTACAAGTGCATCGACTGCGGCATGACCTTCCTAGTGTTCAACAAGTTTCACAATCACGTCGTCACCGAGCACAAGAAAAAAGAGCTCAAGTGTCCCAAGTGCGCCGCCAAGTTCCGCTCGCCCAGCGACTATCTCACCCATCACGAATTCCACCGCAAGAAGAACAACCTCAAAGACCCCCAAATATGGAAAATCGAGAACGAGGACAAGAAAGTCGCTTGCACCTTGTGCAATCAACTGATTCCCAAAGCCGATCTGGCGGAGCATAGAAACTTGCACCTAAAGGTCAAGATCTATTCCTGCGTCATTTGTCGATCCATGTTCAGCAGTCCGGGCGCTTTGGAGATTCACATGAAGGACCATGGCATCGACGATCCAGGTGAGAGGACCGCGAACACCAGTTGTATGGAGTACGGCCAGGAGGAGACGCAGAGCCCGATTGTGAAGAATACCGAGTGCGCCGAGTGCGGGAAGAACTTCTCCAATGTCGCCAATCTCAAGCGACATATTCGTAACGCTCATGGCGAGGAGAGACGAATCGACTGTCCCGAGTGTAACCGAAACTTCAAGAACAAGGAGTCTTTTGATGAGCATCAGCGACTTTCGCACAATACGGAAAAGACCGTTCTCAACTGTCCCGAGTGTCCGAAGACGTTCGTCTTCCAGGCGAATTTGGATTTACACATCAAGAACGTGCATGTTCATAAAGAAACCTCTTCGCACGAGTGCGAAATCTGTGGCAAGTGTTTCGCCGAGGAATCATCGTTGAAAATCCACCGCGGATGGCACAATAGAGCGAATTCTAGGTTTAGCCTCGAGGGCGCTTCGTTGGCTGGTTCTTCCAAACCGGCGAAAGCGAGAAAAAGCTTCCCCACCTCACAAGTCATTCAACTGCAATGCCAGGTTTGCGATGACAAATTCCACGACGTTGGTGACTTGCGAAAACACGTCTGGGACGTTCACTGTGCGCGAACCGCGAAACAAGAGATCTGCTCCATTTGCTCGAAAACTTTCCCCGACCAAGAGACGCTAGGGATCCACATGGAGTTGCACGAAACAAAAGACGACGACGTCGAGGACGGCGAGAATCAATTTCGCTGCGAATTCTGCGACAAGTATTATAGTTCAAGAAAAATCCTCTGGCGACACAAGAAACTCCACAAAGTCTCCCAAGTGCCGTCCTATCAACGTTTCCAATCCCTACCCACACGGAAAACCTTCTGCAACGGATGTAATCGAACCTTCTCCACCGAAAATCTTCTCAAGCGTCACAAGTTAACTTCCACTGATTGCCAATTCGGTCGAGTGCAAATAGAGGGGAAAAAACCGGTCACTTGCCACATTTGCAAGAATGTATTCCCGAGTATGAGCATTCTCTATCAGCACAAGCAATTGATGCACAAGTTCCCATCGCGTGAGAGGAATAACGAGTGCGTGCCAATAGCTAGTGACGAAGGGGTCAAGTGTAACATTTGTGGTAAATTATTCTCAGGGGTTTCGAATCTAAAGCAACATTTCGCGATGAAGCACAAGAGTGTGACGATGCATCCTTGCAATGTGGGCAATTGCAAGATGATCTTCTCAACGCCGCACGCACTAAAGAGTCACGAGTTACAGCATTCGAATATGATATTCAGCTGTGGAATGTGTGAGAAGCATTTCTTTCATCGGGGAATTATGGAGAAGCATATTTACAATGCGCATCGTGCAGCTTACGAGTCGATTGTGGGCGATGATAAGAGTTCCCTATTCAAGGAGACGGACCTCACGTCGTACATTGTGAAGGGAGCGACCGGGACCGTCTGTCCAAGATGTAAGATCAAGTATCCGAATATCAAGGCCATGAAGATTCATTACTTTAAGTTTCACGAGACGCTGGGGTAA
Protein Sequence: MNEVEELQGLESACRLCLTTDETRSSIFGAAYNVDPLIVKIKNCLSLQISQEDKLSTLICITCVNKVNQWHQYKKDCLQSQDKLLEWLEKQSEPLPIVTVKKEVVEDSAESEEVEKISETQLTNSKEIAPEINENTGKNSEAQTNSRENPIDENNEGNLQKNDETILQKNAEKNSETVEKITTNLEKKNSENAEKSSECTEKSVQNGEKSGENGEDTESGESSESKESRENMEKTGANAEKMDENAEKMDKIESMRKLMLREKEPKEDEKQMEIETEKRERNKRRLSNDLENDSVKRFNPLPIKTEPIDDTEMALDDDASNSTIGIPLEAQQIKVLNKGKKKIRRGPHTHFRGARIFKRKCLHCQINLHSKTSYAKHMARFHSKVHQKTGGMVETGIETGIGTGMGRGMRNRVNSEIEETEELIEDVEEELENLEEDAPLTPVQQNIISQLKTYTCYSCEQSFQDRRSTLNHIRQHMPDLRTFTCVACLTEFGDQGTYKEHCEESFECAMKIALVIPIQGTEKYFTCNMCLLPMANRKELLSHLAKHSDKQYEELMAPPPKLTPIVTVNSLPYGMGDPAYNHECDLCGMIYRYKPNMIKHRELCASLQPEGRTSYKCIDCGMTFLVFNKFHNHVVTEHKKKELKCPKCAAKFRSPSDYLTHHEFHRKKNNLKDPQIWKIENEDKKVACTLCNQLIPKADLAEHRNLHLKVKIYSCVICRSMFSSPGALEIHMKDHGIDDPGERTANTSCMEYGQEETQSPIVKNTECAECGKNFSNVANLKRHIRNAHGEERRIDCPECNRNFKNKESFDEHQRLSHNTEKTVLNCPECPKTFVFQANLDLHIKNVHVHKETSSHECEICGKCFAEESSLKIHRGWHNRANSRFSLEGASLAGSSKPAKARKSFPTSQVIQLQCQVCDDKFHDVGDLRKHVWDVHCARTAKQEICSICSKTFPDQETLGIHMELHETKDDDVEDGENQFRCEFCDKYYSSRKILWRHKKLHKVSQVPSYQRFQSLPTRKTFCNGCNRTFSTENLLKRHKLTSTDCQFGRVQIEGKKPVTCHICKNVFPSMSILYQHKQLMHKFPSRERNNECVPIASDEGVKCNICGKLFSGVSNLKQHFAMKHKSVTMHPCNVGNCKMIFSTPHALKSHELQHSNMIFSCGMCEKHFFHRGIMEKHIYNAHRAAYESIVGDDKSSLFKETDLTSYIVKGATGTVCPRCKIKYPNIKAMKIHYFKFHETLG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00882404;
90% Identity: -
80% Identity: -