Basic Information

Insect: Leptopilina drosophilae
Gene Symbol: salm
Assembly: GCA_032873175.1
Location: CM065487.1:8760870-8773882[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 4.8e-06 0.00097 20.8 0.9 1 23 386 408 386 408 0.98

2 9 9.4e-06 0.0019 19.8 2.1 1 23 414 436 414 436 0.98

3 9 0.049 10 8.1 3.1 2 23 799 820 799 820 0.97

4 9 4.1e-08 8.3e-06 27.3 0.6 1 23 826 848 826 848 0.97

5 9 5.7e-05 0.012 17.4 2.6 1 23 858 880 858 880 0.98

6 9 0.002 0.4 12.5 1.9 2 23 1182 1203 1181 1203 0.97

7 9 0.011 2.2 10.2 1.1 1 15 1209 1223 1209 1223 0.94

8 9 9.7e-07 0.0002 22.9 2.1 3 23 1431 1451 1429 1451 0.96

9 9 1.9e-07 3.8e-05 25.2 0.9 1 23 1457 1479 1457 1479 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	4.8e-06	0.00097	20.8	0.9	1	23	386	408	386	408	0.98
2	9	9.4e-06	0.0019	19.8	2.1	1	23	414	436	414	436	0.98
3	9	0.049	10	8.1	3.1	2	23	799	820	799	820	0.97
4	9	4.1e-08	8.3e-06	27.3	0.6	1	23	826	848	826	848	0.97
5	9	5.7e-05	0.012	17.4	2.6	1	23	858	880	858	880	0.98
6	9	0.002	0.4	12.5	1.9	2	23	1182	1203	1181	1203	0.97
7	9	0.011	2.2	10.2	1.1	1	15	1209	1223	1209	1223	0.94
8	9	9.7e-07	0.0002	22.9	2.1	3	23	1431	1451	1429	1451	0.96
9	9	1.9e-07	3.8e-05	25.2	0.9	1	23	1457	1479	1457	1479	0.98

Sequence Information

Coding Sequence: ATGCAGTTAATGCGATGGAGTATAACAAGGCGCCTCGACAGTCGAGGAATGAACGGCCGTCGCGACGCCAAGAGCTGTCAAAATGATCCAGCTGGACCCCGCCTGTCTTATTCACGATCTTCCGgAGAAGAAAATGACTCAGCTTCGGAAGATGAGGAAAGTGGGGGAGGAGCCATTGGTGAGGAGGCTGTTGATCTTACGGCAACACGATCCCATCATGGAGATGAGGACGAGAAGGACCCAGAAGAATTACCGGTGGAGGAGGACGAGGATGAAGGTGTTGATGAACAGGAGGAGCAGGACGAGGATGAAGAAGGTTCCCGCAAGCAAATGCGTCACCGTCAGGACGCGGAGAATAATAACAGCTTTGTGGAGGGTGGTCCAGCTGCAGGAATCTTCCCACCAGCCGGAACTAGTCACGTCACCCTTGGAGCCCTTGAAAACACAAAGGTGGCAGTCGCTCAATTTGCAGCAACGACCCCGACAGGCGCTGCAGACAGCGAGGCAGTTCTCCAAGACTACGCCCTTTTGAAGAACACACTCTACACCCTTCAACACCAGCATGTTTTCCAACTTCAGCTGATCAATCAGTTGACCCAACAGCTATCGGGATCACAAACTGGTGCACAAAATATGGCTGTAGGAGAATCGACCGCCTCTGACAGCAAAGAAGCTTCACCATCTCCAGTAGCGAATCCCAAAACTCATTCTGTCCTCACTTCTCCCCCTCCTTCCAGACCACCCAGTCATAATCAATCATCTCCTTCGCCCCTAACTCCAAATTTACCACAGGAAAGGCCGGCTCCTGCAAACAGTGCTTCACCCGTCGGTGTAACACTGCCTCCAACTACTGCGACCACGCCTACCACAACGTCCAGCAATCAAACAACAATGAGTCATCAAATGCCACCTCTCTGTTCAATTAGTTCATCATTAGCGGCGTCAATCATCACGAACAATGATCCACCGTCTCTTCACGAACCAAATACCCTGGAGATGCTTCAGAAGCGTGCACAAGAAGTACTTGATAACGCGAGTCAAGGTCTCTTAGCGAACAATCTTGCGGACGAACTTGCCTTCAGGGGTAGTAAGGGTTCAAGACTGTCTCCCTATGATTCGAAATCCGGTGGCGGTCGGGGTGAACCCTTCTTCAAACATCGATGTCGATACTGTGGCAAGGTCTTTGGCAGCGACTCCGCCCTCCAGATCCACATACGGTCACACACAGGTGAGCGTCCCTTTAAGTGCAACGTCTGTGGAAGCCGATTCACCACCAAAGGAAACTTGAAGGTCCACTTCCAAAGGCATACGGCCAAGTTTCCACATATTAAAATGAATCCAAATCCCGTTCCCGAACACCTGGATAAGTATCATCCTCCTCTCCTTCAACAGCTCGCAAATTCCGGACAAAGACCATTACCCTCACCACCACCACCTCCCCATCATCCTCCCTTCCATCCCGCAGCAGCACACGGTTTTCTTCCACCACAACCTCCCTTACCTCTTAGTTTAACCATGCCCGGTATGTCGCCCATTTATCGACCTCCTCTCGTCAATCACCGAGATGATCAAGACGTCCCTGAGAACCTCAGCAAGCCTGTTACAACGGCACGTGCAATCTCTCCTCACTCACCCAACACTCAGAATTCTCATCCCTTTCTCGATCACCAACTCTCCAAACCACAGTTCGAACAGAGGGAGGAAATAAAGGTAGAGCAACCGTTACTGGAATCATTTCAGCAACAGCCGTCCAGTCAAGATAGTGGAGAGCAAATAACTCCCAAACGAGAACCTGAAGACACCGACGAGCAACCGGAGGACGAAGGTGAGGAATTTGAGGAATCTAGAAAATTTATGAACTCTTCACCATCTTCAGCAAATCCACCTTCCCACGATTTGGGAAATCCTCATCAATACGAAGACTGCAGTATGGATAGTAAAATTAGCGGGAGGCTGGAAGGTGACGTCGACATGGAAGCCGACGAAGAAATGGAGGAACAACCCGAAAACCTTTCAGGAAGAGGTCCCGGTCATCTACTCTCCCAACAACCATTCACATACCCCGGGGCATCGCCCGCAAGTAGTAGTGCCAGCAGCGGAAGTCTTCAAACCTCCTTCGCCGGAATAATATTCACTGGACCACCACCGCCACCCCTACCACATCAACAATTACCTCATCATCCAGTCTCCACAACAGCAACAACTCCCACAGGCTCCGTCAGTGACATGGTCATTGATCCAGCACGCGATCCAGCTATCTACTCCAGCCTCCTACCCCGACCTGGAAGTAACGATAACTCCTGGGAAAGTTTAATCGAAATAACTAAATCCTCGGAGACAATGAAACTCCAACAACTTGTCGACAATATCGAGCATAAACTAACCGATCCCAACGAATGCGCCATTTGTCATCGAGTTCTTTCATGCAAAAGTGCTCTCCAAATGCACTACCGCACACACACTGGAGAACGACCCTTCAAATGCAAAATTTGCGGAAGGGCCTTCACAACAAAGGGTAATCTTAAGACTCACATGGGTGTTCATCGAGCGAAACCGCCACTGCGAGTCCTCCATCAGTGTCCCGTTTGTCACAAAAAATTCACCAACGCACTTGTTCTTCAACAACACATACGACTGCATACCGGTGAACCCACGGATCTCACTCCCGAGCAAATTCAAGCAGCCGAAGTAAACGAATACCCCGGCTATCCTCACAATCCCCTAGCCTCGTTTCTACCGCAAGGCTTTCCACCCCTCCACCCCGGGGGTCCAGGTTTTCTAGCCTTTCCACCACCCCGACACGCACTAGAAAGGCAATCACAGGAGAGCGATGAGACAAAAGACTTACATCAAAGATTCCCCGACGAGCCCATCGACGACATGGAGGACCCCGAGGAGGAAGACGACGACAGGCGAGACGAGGACGAAAGATGCGTGGATTCCCGAGAGAGGCGATGTGTCGAGGAAGAAGAGGAACCCGAGGACGAGCACGACGAACCCGAACAGAAGGAAATACCAATAATCCCCTCCTTCTCGACATCCTTAGCAGCACTCGAAAATCAAGTGAAAACAATCACAACAATGGCGCAAGGACaaatgaatcaaataaatcaaattagaTCGCCACCAATACATCGATACAATGGCAGTGAGAAGAGTAACAGCCCACCTGGAATTGGAGCACCACTGGACTTGACACCAAGAGCCTCATCAACGCCGGCGTCTGTAGCTTCAGCATCTACACCACCACCACCACAACTACCACCACCGCCACCATCATCATCGTCACTACAAACCACACCACATCATCCTCATCCATTCGGAATGTTTGCAGGACTTTTGCAGGCTGTATCGTCATCTCCATCAATGAATACCATGGGGACAAGTATAAACAGTATTTCGCCAATGAATGCTGTCAGTCCTGGCAGTGGTGGTGGCGGCGGGCCTTTAGCCTCTCTAACAACATCGGCCGTTTTGGCAGCGACCTCCACTTACAATCCGCTTGGCCTAGCTGTCGGAGGGCCAGCAGTACGTGGCAACACTACGTGTAATATCTGCTACAAGACATTCGCGTGTAACTCTGCATTGGAAATTCATTACCGGAGCCACACGAAGGAACGACCTTTCAAATGCACCATCTGCGATCGAGGATTTTCAACCaagAGTGACGGAACAATGATAGAATCGTGCTCATGTACTGAACAGGAAAATGGATTATCCACAAGAACTTCAACAACAACAGTTAAAACCGAACTTCCATACCAAACGTTATCAGCGCAACCGCCATCGATAGTATCGGCCAAATCACGAGAGAAGCCAAAACGCAGGAGACGGCGGCCCGAGGATCGTAAGAATCGGGGGCGGACTGGGACTGGAGAGGGGCGGGGACTGACGTCTACCTATGCTGCAATCTATGGGGACGTACGCCTGCCCCCACTGATGCCCCCCGCCCTCGGACTTCTAACCTCGGACCCCGTATTCCTGGGCAACATGAAGCAACACATGCTAACTCACAAAATCCGGGACATGCCACCTCATCTCTTTAGTGATTCCAAGCCACCAACTCAACAGCATCAACAACCACTTCAAGAACAAGAAAGCTCTAGAAGTCCAATGTGTACTGACGAGTCTAGTTTGCctccaccaccaccaccacctccGCCTCCTCCACCTCCACCACCAATGCCACCAACAACAGTTGTTGAGTCCGCAGTTCCAGTAAAGAGATCGCACACTGAAACTGAACTGTCAGCTCCAAAAAGGCCACACAGCATGTCCAGCAAGCACTTGTGCCAGGTTTGCAATAAGAATTTCTCCTCATCCTCGGCGCTACAGATTCATATGAGGACGCACACTGGTGACAAACCATTCAGATGCACCGTCTGCCAGAAGGCCTTCACCACCAAGGGCAATCTAAAGGTTCACATGGGTACGCATATGTGGACCAACGGAACCTCCAGACGAGGACGGCGAATGTCACTGGATCTTCCTCCTCTGCCCATCACTCCCAAGGACTCAGAGTTTCTCCAGCGAAGACCGGATCTCTTCTATCCTTACCTACCCACGCCATTCCTTAACGGAGTTCAACAAAAGCTGAACGAGATTTCGGTGATCCAAGGTAGCAACGGTATGCCAGTTCATCCAGTAAATGCAAGCAAGTACGCGGGAATTTTCGGCTCAGTGTACAGTGGTGGATTCCCCCTAGAAAAACAACCAATGACACCCAGTAATGGTCCATTGGGCGATACAAAATCAGCCCTTGCCTCTGGATCAATGCTATTCCAAACACCATCTCCGGCACATTCCCCAGGAGCGCCATCCTCAAATACAGGAAATCAAAATTCAGCAAGCATACCCCCATGGAGTGGTGAACCTCTACAGCATCACTACGAACGTGATACACCATCAAGAACAGAGAGCAATCCAACACCACCATCAGCACGTTTACCACCTCCACCTGCACCACGAGGGGAAGGTCTAGCCGCATGA
Protein Sequence: MQLMRWSITRRLDSRGMNGRRDAKSCQNDPAGPRLSYSRSSGEENDSASEDEESGGGAIGEEAVDLTATRSHHGDEDEKDPEELPVEEDEDEGVDEQEEQDEDEEGSRKQMRHRQDAENNNSFVEGGPAAGIFPPAGTSHVTLGALENTKVAVAQFAATTPTGAADSEAVLQDYALLKNTLYTLQHQHVFQLQLINQLTQQLSGSQTGAQNMAVGESTASDSKEASPSPVANPKTHSVLTSPPPSRPPSHNQSSPSPLTPNLPQERPAPANSASPVGVTLPPTTATTPTTTSSNQTTMSHQMPPLCSISSSLAASIITNNDPPSLHEPNTLEMLQKRAQEVLDNASQGLLANNLADELAFRGSKGSRLSPYDSKSGGGRGEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHTAKFPHIKMNPNPVPEHLDKYHPPLLQQLANSGQRPLPSPPPPPHHPPFHPAAAHGFLPPQPPLPLSLTMPGMSPIYRPPLVNHRDDQDVPENLSKPVTTARAISPHSPNTQNSHPFLDHQLSKPQFEQREEIKVEQPLLESFQQQPSSQDSGEQITPKREPEDTDEQPEDEGEEFEESRKFMNSSPSSANPPSHDLGNPHQYEDCSMDSKISGRLEGDVDMEADEEMEEQPENLSGRGPGHLLSQQPFTYPGASPASSSASSGSLQTSFAGIIFTGPPPPPLPHQQLPHHPVSTTATTPTGSVSDMVIDPARDPAIYSSLLPRPGSNDNSWESLIEITKSSETMKLQQLVDNIEHKLTDPNECAICHRVLSCKSALQMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRAKPPLRVLHQCPVCHKKFTNALVLQQHIRLHTGEPTDLTPEQIQAAEVNEYPGYPHNPLASFLPQGFPPLHPGGPGFLAFPPPRHALERQSQESDETKDLHQRFPDEPIDDMEDPEEEDDDRRDEDERCVDSRERRCVEEEEEPEDEHDEPEQKEIPIIPSFSTSLAALENQVKTITTMAQGQMNQINQIRSPPIHRYNGSEKSNSPPGIGAPLDLTPRASSTPASVASASTPPPPQLPPPPPSSSSLQTTPHHPHPFGMFAGLLQAVSSSPSMNTMGTSINSISPMNAVSPGSGGGGGPLASLTTSAVLAATSTYNPLGLAVGGPAVRGNTTCNICYKTFACNSALEIHYRSHTKERPFKCTICDRGFSTKSDGTMIESCSCTEQENGLSTRTSTTTVKTELPYQTLSAQPPSIVSAKSREKPKRRRRRPEDRKNRGRTGTGEGRGLTSTYAAIYGDVRLPPLMPPALGLLTSDPVFLGNMKQHMLTHKIRDMPPHLFSDSKPPTQQHQQPLQEQESSRSPMCTDESSLPPPPPPPPPPPPPPPMPPTTVVESAVPVKRSHTETELSAPKRPHSMSSKHLCQVCNKNFSSSSALQIHMRTHTGDKPFRCTVCQKAFTTKGNLKVHMGTHMWTNGTSRRGRRMSLDLPPLPITPKDSEFLQRRPDLFYPYLPTPFLNGVQQKLNEISVIQGSNGMPVHPVNASKYAGIFGSVYSGGFPLEKQPMTPSNGPLGDTKSALASGSMLFQTPSPAHSPGAPSSNTGNQNSASIPPWSGEPLQHHYERDTPSRTESNPTPPSARLPPPPAPRGEGLAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00677000;
90% Identity: iTF_00883249;
80% Identity: -