Basic Information

Gene Symbol
ct
Assembly
GCA_032873175.1
Location
CM065487.1:26077362-26091239[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 7.8e-28 1.2e-23 84.2 0.0 2 72 502 573 501 578 0.95
2 3 1.5e-32 2.3e-28 99.3 0.0 2 77 907 983 906 985 0.96
3 3 8.4e-31 1.3e-26 93.7 0.0 3 75 1139 1212 1137 1216 0.95

Sequence Information

Coding Sequence
ATGAGACGAGATACAATAGAAGGAGAAAGAGTGGGAGAAGGGACGAAGCGGAGGGAAAGAGGAACAGTGGCTAGAAAGACAGAGAAGGATAGAATTGAGAAAGATGGAGAGAAAGGCAGAGAGAAAGACAGAGAGAAAGACAGAGAGAAAGACAGAGAGAAAGACAGAGAGAAACCAGAAAGAGTGAGAGACCGAAGGAGAAGAAGAGAGGGGCTAGAAACTAAACCCGATCAGTCATTAGACAAGTGGGTCATCGAACGTGAGGGTGTTAACTCCACCTGTCCATTGCAGGGAATTGTCGACTATAACGCAAAGACCCCGGGACTGGCGCTAATGATTAGCCAATTGGTGGAGGAAATATCAAGGCTTCAACAGAGTCTACAGCGACTTCAGGAATCGAGCGCGCAGACAGCGGCGCGTTTAGAGGACGAATTAGAAGCGCGCCGACAGCACATCAGTAGACTGGAGAGTAAATTAGAAAAGCAAAAAGACTATGATGATCTCAAACGTGAAATTAGCGTCGTAAGGTCTGTCGATCTCTCGCAAATACCCACCAGTGAACCTGGAAAAAGTCTCGAGCACCTTCTAATGGAACGTTCTAAGGCACTTCAACAGGCGGAGAATCTCAAACCACCAAACACACCCGACAATCTAGGTGGACTGTCGTCACCCCTGCAGCGTGCCGCGACCGCCTCGCCCCACGGGGTTGTAAACGCACCACCAGTATCCCTCGTAACATCCCAAACAACTCTCCCAACACGCTCCACTCCAACACCATCATCAGCAACATCGACAAGTTCAAGCCTCCTATTTCCACCACCTCTCCAAAACGTTGAAACCTTCGGTTCCTTCCTCGGCGAGGAAATTGTCGCAAACTGGAGGCGATCGTTGGAAAAGACGATCATGAGCCAACAGCAGCCACAACAAACCTCACAAGCTTCCCAACAACAGCAAGCACAATCAAACCTTCTAGGACTCCATCCGCCAACAATACCAAGTAATCTAAATCACCTTCCATCACCAACAGATCCAAATACACCTGGTAAATCGACAACACCATTGGGTTCATTGGACGCAACCGAAAAAGCCTTAACACCAATACCCGGTCATGAAACACCAGCTCCACCAACGCCATCATCAACGGCACTAACATCACCGCCAGCCACACTTCCACCACCAacatcaacaacaacaacacCAATCGATTCAACCCTCAACGGTTCCAATCTCACGAATCAAACACCCAAAAGTCCAGCCGAGGAGTCgtgcaacaacaacaacaacagtcATCACTTAACCAACAACAACATTGGCGCACTCAGCGTACTCGACAGTCTAAAGGGTCCCTTTCGTTTCGACGACAGAACACATCCCTTCAGATTTGGTGACGAATTCGGCGCAGCCGGTATGGCCGGAAGACTCGGCGAATCCCTCATACCAAAAGGTGATCCAATGGAGGCGAGACTGCAGGAAATGTTGCGCTACAACATGGACAAGTATGCGTCACAAAATTTGGACACATTAAACATTGCAAGAAGAGTACGTGAATTATTGTCAATACACAACATTGGACAAAGACTATTTGCCAAATATGTTCTCGGTCTAAGTCAAGGAACAGTTAGTGAACTTTTGAGTAAACCAAAGCCATGGGACAAATTGACTGAAAAAGGAAGAGACAGTTATAGAAAAATGCACGGCTGGGCTTGCGACGATAATGCTGTCTTACTACTCAAGTCCCTTATTCCTAAAAAAGAGTATGTTTCAGGCAAGGAGCAGGGAATGCCAGCATTTGCTCGCGGTCCTCAGGACGGCCCACCAGACATGAACGATGAAAGATTTGCTCATATTCTTTCGGAATCTGGTCACCTACAATTAAGAGGTGAGCACGAGGTCTCAAACGATGCCGATAGCAAGAGTCCAAGTCGTGTTGGCTGCCCAAGTCCATTCAGTAAGGAAAGGCTTGACAGTCAAAATCGTAGACTGAAGAAATACGAGAACGATGACATTCCCCAGGAAAAAGTTGTAAGGATTTATCATGAAGAATTAGCCAAACTCATGGGACGAAGAGTCGACGATCTTCGTGGACCAAGAGACTTTCTTCAAAGCGCGATGTTTCCAAACTTTTTCAGTGGCACGCCTGGCCTTCAAGGTATGGAACGTTCACAGGACGAAATTCGTATGGCATTGGACGCTTATCATCgtgaattacaaaaattgaatgccGCCTCTGGTCAAAATCCAACACTAGGTGGACTTCCCCTTTCTGGTTTACCGAGTATTCTACTTCAACAACAAGCACTTCAACAGCATCATCTCGCGACAAATGGCGGTGTTGTTCAAGATTTAAGTTTAGGAAAACTAGATCCAAGAAATAAAATGATGAACGGAGTGACAGAGGAGGAGAAAGAGAAAATGGAGGAGGCTATGAGGCATGCTGGAAGTGCATTTTCGTTGGTGAGGCCTAAGCAGGAGCCAACTGGTCCACAATCGACACCAGGTGGTTCCAGTGCCAGTTCACCATTAGGCAATTCAATTCTTCCACCTGCAATGACGCCGAGTGAAGAATTTGCCGGTGCCGCCGCAGCCAGTCCCCTTCAAAGGATGGCGTCCATCACTAATAGTTTGATCAGTCAACCGTCCACGCCGACCCATCATTCGGCAAACCAAAGACCTCTTAAAGCCGTTCTTCCTCCCATAACACAACAGCAGTTTGACAtgtacaataatttaaataccgAAGATATTGTCAAGAGGGTGAAAGAACAACTCTCACAGTATTCAATTTCACAACGACTGTTCGGCGAATCAGTATTGGGATTGTCGCAAGGTTCAGTGTCTGATCTACTCGCCAGACCCAAACCATGGCACATGCTCACGCAAAAGGGACGCGAGCCCTTCATCAGGATGAAAATGTTCCTCGAGGACGACAACGCGGTTCACAAATTGGTCGCCAGTCAGTACAAAATCGCACCCGAGAAATTGATGAGGACCGGCGGCTACGGCGGCCTGCCTCGTAAGTTTAACTCAGCTTGTGGGACACCTATGAAACCGATGCCACCTACCAAATTGGTTCAGGAACAACTGCAAAATGCAGCCAAGGCTCAAGCGGCGGTACAGGCTGCAGCTCAAGCAGCCGCCCAGCATCAGCAGGAAAGTCAGATGCAACTTGGACCACCGCCACAAAATCCCCAACATTCTCAACATCCACAACCACCACCACCAATGATGCTGACACCATCCGGACCCCATCTTCAACATTCTCAGCTCAGTATGCAAGAACTCCAGAAAAAGCAacagcagcaacaacaacaacaaataaATCTCCACTCTCCCCATCATCAAATGGCACCATCGCCACTGAGAAGCCTCCATCCTCATATATCACCAAGTGTATACGAAATGGCCGCCCTGACCCAAGATCTCGACACCCAaacaataacaacaaaaatcaaGGAGGCTCTACTCGCGAACAATATCGGCCAGAAGATATTCGGCGAAGCTGTCCTCGGACTGTCGCAAGGCTCCGTCAGTGAACTCCTGAGTAAACCCAAACCCTGGCACATGCTGAGTATAAAGGGCCGAGAGCCCTTCATCAGAATGCAACTCTGGCTCTCTGACGCTCACAATGTCGACAGACTGCAAGCCCTAAAGAACGAGCGACGAGAGGCGAACAAAAGACGACGAAGCAGTGGTCCCGGCCACGACAACAGTTCCGACACATCAAGCAACGACACTGCCGAATTCTACCACTCGGCCTCGCCCGGACCCGGACCGACATCAGCCAAAAAACAACGAGTCCTCTTCAGCGAGGAGCAAAAAGAAGCCCTAAGACTCGCATTTGCCTTAGATCCATATCCCAATGTCTCAACAATCGAATTCCTCGCCGGCGAATTGAGTCTCTCGTCAAGAACAATAACCAACTGGTTCCACAATCATCGAATGAGGCTAAAACAACAACCACCCCACGGTCAGCCCGAACCACAATCGCCCCGCGAGCCCGGACAACCATTCGACGCCGTACAATTTCGACTAATGCTAAATCAAAAACTCCTCGACATTCAAAAAGAAAGACTATGCCTGGGCAACGTACCAATGTCCTATCCACCCTACTTCAATCCCAATCTCGCCGCCCTCGTTGGCAATGCCCTCAAGGAACAATGTTCCGGTCTCGATCTCTCCATGGGCTCACTGAAACGTGAGCCAATGCAAGAATTCGAAGACGAGGACGACGCAATGAGTAATTTAGGTAGTGAAGACTCCGAAGGTTCAGCGGGCAGTATTAAGCGTGAACCAACCGAAACACCAGCACCAACAACCGGCAGGTCGAGTAGACGGAAACCAGCAGCCCCCCAATGGGTGAATCCCGAATGGCAAGAGCCAACAAGAACAGGCGACGAGGTAATCATCAACGGCGTGTGTGTCATGCAAACCGACGACTACGGTGTCAAGAGAGAAAACGAGGAGACTGTCAGGGTCGAACCAACGCCCGTACAAGACAGATTTGACGACGACGCTCAAAGTGATGTCTCATCCGTGTCCGGTAACAATCCCCAAGACCGAGACAGTCCCCTACCAAGTCCAAAATCAGGTCAAACAACTCCCGTAACATCACCACGACCACCATCCATTCAACAAACACAACAATCAACCGAGGAGAGTCCCAAAGAGCTCGTCAAACACGAACCCGAAGAAACGTgggactattaa
Protein Sequence
MRRDTIEGERVGEGTKRRERGTVARKTEKDRIEKDGEKGREKDREKDREKDREKDREKPERVRDRRRRREGLETKPDQSLDKWVIEREGVNSTCPLQGIVDYNAKTPGLALMISQLVEEISRLQQSLQRLQESSAQTAARLEDELEARRQHISRLESKLEKQKDYDDLKREISVVRSVDLSQIPTSEPGKSLEHLLMERSKALQQAENLKPPNTPDNLGGLSSPLQRAATASPHGVVNAPPVSLVTSQTTLPTRSTPTPSSATSTSSSLLFPPPLQNVETFGSFLGEEIVANWRRSLEKTIMSQQQPQQTSQASQQQQAQSNLLGLHPPTIPSNLNHLPSPTDPNTPGKSTTPLGSLDATEKALTPIPGHETPAPPTPSSTALTSPPATLPPPTSTTTTPIDSTLNGSNLTNQTPKSPAEESCNNNNNSHHLTNNNIGALSVLDSLKGPFRFDDRTHPFRFGDEFGAAGMAGRLGESLIPKGDPMEARLQEMLRYNMDKYASQNLDTLNIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDDNAVLLLKSLIPKKEYVSGKEQGMPAFARGPQDGPPDMNDERFAHILSESGHLQLRGEHEVSNDADSKSPSRVGCPSPFSKERLDSQNRRLKKYENDDIPQEKVVRIYHEELAKLMGRRVDDLRGPRDFLQSAMFPNFFSGTPGLQGMERSQDEIRMALDAYHRELQKLNAASGQNPTLGGLPLSGLPSILLQQQALQQHHLATNGGVVQDLSLGKLDPRNKMMNGVTEEEKEKMEEAMRHAGSAFSLVRPKQEPTGPQSTPGGSSASSPLGNSILPPAMTPSEEFAGAAAASPLQRMASITNSLISQPSTPTHHSANQRPLKAVLPPITQQQFDMYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAVQAAAQAAAQHQQESQMQLGPPPQNPQHSQHPQPPPPMMLTPSGPHLQHSQLSMQELQKKQQQQQQQQINLHSPHHQMAPSPLRSLHPHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNVDRLQALKNERREANKRRRSSGPGHDNSSDTSSNDTAEFYHSASPGPGPTSAKKQRVLFSEEQKEALRLAFALDPYPNVSTIEFLAGELSLSSRTITNWFHNHRMRLKQQPPHGQPEPQSPREPGQPFDAVQFRLMLNQKLLDIQKERLCLGNVPMSYPPYFNPNLAALVGNALKEQCSGLDLSMGSLKREPMQEFEDEDDAMSNLGSEDSEGSAGSIKREPTETPAPTTGRSSRRKPAAPQWVNPEWQEPTRTGDEVIINGVCVMQTDDYGVKRENEETVRVEPTPVQDRFDDDAQSDVSSVSGNNPQDRDSPLPSPKSGQTTPVTSPRPPSIQQTQQSTEESPKELVKHEPEETWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00879518;
90% Identity
iTF_00882836;
80% Identity
iTF_00881119;