Ldro033807.1
Basic Information
- Insect
- Leptopilina drosophilae
- Gene Symbol
- retn
- Assembly
- GCA_032873175.1
- Location
- CM065485.1:34960619-34987209[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.4e-14 2.5e-10 41.9 0.0 17 79 30 90 22 91 0.91
Sequence Information
- Coding Sequence
- ATGCCGAATTTAACGGTTTTAACTTTACTCATTATGTCTCTACTCGCCGACGCCTCTGCTCTACTCGGCGATCATCCTTTACACATCAGAACGCCGATCAATCGATTACCGATAATGGCAAAATCTGTATTGGACCTCTACGAACTCTACAATTTAGTCATTGCCCGAGGCGGATTAGTTGATGTCATTAACAAGAAACTATGGCAGGAAATAATCAAAGGTCTTCATCTTCCGTCAAGCATCACTTCTGCCGCATTTACACTCCGCACACAgTCATCACCATTGTCTTCATCCCCACAAAGACAGAGTCCCCCTTCGTCAAGTGGAAgtattcaagtaaaaaatgaaCAGGACTTAATTGCCAGAGCTGCAGTTGCCGCCAGTAAAAGGCTCAGGCTAGAAGACGAAGTTCCCGAGGAGAAGGAAACTTTATTATCTAATCCACGCACCAATATTACAATCTCCAATAGAGGCGATGGTCGTAATGGAGACAATTCTCTCGTTGTTAGTATAGAATTGAACGGAACCATGTATCAAGGTGTATTATTTGCACAATCCGCAAGTAAGGACCTCACGACTCCAACCAGCAACAGTGCAAAGACACCTCGTAGTATTGTCTCGTGA
- Protein Sequence
- MPNLTVLTLLIMSLLADASALLGDHPLHIRTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQSSPLSSSPQRQSPPSSSGSIQVKNEQDLIARAAVAASKRLRLEDEVPEEKETLLSNPRTNITISNRGDGRNGDNSLVVSIELNGTMYQGVLFAQSASKDLTTPTSNSAKTPRSIVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -