Lcla002352.1
Basic Information
- Insect
- Leptopilina clavipes
- Gene Symbol
- Gata6
- Assembly
- GCA_001855655.1
- Location
- JUFY01021683.1:3873-12825[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-17 6.1e-14 51.9 4.3 1 35 504 537 504 538 0.97 2 2 4.5e-18 1.5e-14 53.8 7.8 1 35 563 596 563 597 0.97
Sequence Information
- Coding Sequence
- ATGCGACACGCAGCATCCGAAATTAAGGAAACGATGAAGGAGACTCTCGCGAAACAGGATATAAAACTGGAGTGGGAGGATCGTCGTTTATCAGGAAATAGTTCTTCACCGCCATCGGTAACAAGAATGAATGATGATCAAACAAGCGGAAGTCCACAGAGTGTCATCACAACACGCCGTTATACACGTACAATTACAGCGACAGGTCATATTACCGAGACTCTCACCACCAATCATGGGCCCGATTCACCTGAATCAAATTCCAATAATCAACAAGTGATTCAGCATCAGCAAATTCACGTCAAGGACGAAAGTTCCGATCGTCAAAGATACCATCAAGAGGAAATACAACATCGTCCCGAGCATGTTCCGATTTCTCCCCATGGCAGTCCCAATCAGCAACAACAAGTGGCAGATCAACATCAGCCTCCAGTTATCTTTACAATCAGTAATGGGCCCGAGTTACAAGTTGAGCCGACCGAAAACCCCGAACCAAGAAAAGAACCACCCAGgTACGAGACGACAATTCCGGAGAGAAGTGAAAGTGATCGGATATATTTATTCTCGAAGGATGCGGAAGTGAGACGTGAGGGTGGTCATGTGATTGCACTTCAAGTGCAGGAGCATCGTAACAGACAACATCAACACACACATCATCGAATTAGTCCAGCGCATCATAATAACGAGCATGGTGGTCGTTATCAAAATTCACCGATTAATGCAACTAGTGATGATTATGAGCCAACGGTAATGGTGACACAATCGGGACCTGGGGGACATTTAACCGCATCTGTTACATATTCGCCGCCCATTGAATTGCGAACTAGTCAGCATCAACAATTAATTGGAACCTATACCGAGACTGGTGCAAACGGTACAGTGAAATATAATGGCGAAACAACTGTTCCAACTGATAGTATCAAAGTCTCCAGTACTTATACAACATTAGAGACAGCGGCTATTCCAGCATCGCAATCGGTTGCCTACAATCAGTATCTCGTCACTGCTGATGCTTTTCAACAACCAACTGGTTATGGTTACGCCAAACCTGCTGAATTGTTCTTCCTGCCAACTACAAATCCACCTGGAGTACGAGTCTCTGAAGTGGAGCCTCCAGCGTACATAAAAAGTGATCCCACATTGACGTCATCCTCTTTATTGAGTACAAGGGCAGTTTCCCTCCAGTATCAGCAACCTGGTTCTCCAAATTCACAAATGGATCTCTACAGTACGGGCGCTACGGTGACGTATCAATATCCAAAATCAGTGAACGAGCACTATTGGCCGTCTGATGGTCATTCGCCACCACCGGGAATGGAATGCGGACAAGGTTATCCAGGTGTGACAATATCGCCAAGTGATGCGGCGACAGTCACAACTGGAGCTTATTCCGGTGGTTCCTACATTGCATCAGGACTAAATGGTCCTGCATCACCATGGGGTCTGCCACTTCCAAGTCCAATAGATCCGTCCTTTGACGAATCAAACATCGGCTCAGAACTCAAGGAGTGCGTCAATTGTGGAGTCATGGGAACACCTCTTTGGCGACGAGATGGCACTGGAAATTATCTCTGCAATGCCTGTGGACTCTACAATAAAACTAATGGTGTCAATAGGCCACCGATTCGATGCGCAAAACCCAAACAGAACGTTGCTCCGggTGGTGGAAGAAGACCGGGTGTGAGATGTGCAAATTGTGGAACAAATAATACAACCCTTTGGCGACGAAACAATAATGGAGAACCAGTTTGCAATGCCTGTGGactttattacaaattacataatGTGAATAGACCAATGAGTATGAAGAAAGACGGCATACAGACGAGAAAAAGGAAACCAAAGAATCACGCGAATATGAATTCTGGCCTAAGTGGACCAAGTGGTGTGCAGAAGACCGAGATTAAGTCCAGCTTACTCGGTGAGTCTTCGGTGAGCACGCTTATTCATGAATTACTGTCACTTCAGTCCTCAgcctataattataattttgaagaaatgcCTTCATCCTATCACATTATTTAA
- Protein Sequence
- MRHAASEIKETMKETLAKQDIKLEWEDRRLSGNSSSPPSVTRMNDDQTSGSPQSVITTRRYTRTITATGHITETLTTNHGPDSPESNSNNQQVIQHQQIHVKDESSDRQRYHQEEIQHRPEHVPISPHGSPNQQQQVADQHQPPVIFTISNGPELQVEPTENPEPRKEPPRYETTIPERSESDRIYLFSKDAEVRREGGHVIALQVQEHRNRQHQHTHHRISPAHHNNEHGGRYQNSPINATSDDYEPTVMVTQSGPGGHLTASVTYSPPIELRTSQHQQLIGTYTETGANGTVKYNGETTVPTDSIKVSSTYTTLETAAIPASQSVAYNQYLVTADAFQQPTGYGYAKPAELFFLPTTNPPGVRVSEVEPPAYIKSDPTLTSSSLLSTRAVSLQYQQPGSPNSQMDLYSTGATVTYQYPKSVNEHYWPSDGHSPPPGMECGQGYPGVTISPSDAATVTTGAYSGGSYIASGLNGPASPWGLPLPSPIDPSFDESNIGSELKECVNCGVMGTPLWRRDGTGNYLCNACGLYNKTNGVNRPPIRCAKPKQNVAPGGGRRPGVRCANCGTNNTTLWRRNNNGEPVCNACGLYYKLHNVNRPMSMKKDGIQTRKRKPKNHANMNSGLSGPSGVQKTEIKSSLLGESSVSTLIHELLSLQSSAYNYNFEEMPSSYHII
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00881676;
- 90% Identity
- iTF_00881676;
- 80% Identity
- -