Basic Information

Transcription Factor Domain

TF Family: zf-C2HC
Domain: zf-C2HC domain
PFAM: PF01530
TF Group: Zinc-Coordinating Group
Description: This is a DNA binding zinc finger domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 4.2e-19 2.8e-15 56.6 5.2 1 29 36 64 36 64 0.97

2 4 1.5e-19 9.6e-16 58.1 8.3 1 29 77 105 77 105 0.98

3 4 8e-18 5.2e-14 52.5 5.2 1 29 122 150 122 150 0.97

4 4 6.5e-20 4.3e-16 59.2 5.1 1 29 182 210 182 210 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	4.2e-19	2.8e-15	56.6	5.2	1	29	36	64	36	64	0.97
2	4	1.5e-19	9.6e-16	58.1	8.3	1	29	77	105	77	105	0.98
3	4	8e-18	5.2e-14	52.5	5.2	1	29	122	150	122	150	0.97
4	4	6.5e-20	4.3e-16	59.2	5.1	1	29	182	210	182	210	0.97

Coding Sequence: atgaactTAGAAGAGTTTTCTGTTCATTGTATGAATATGAGGAGGCAATCATTGAATATTGCATCTCGGTCCGCCCCTCGTGGTCGCGATGGCAAGGAGCTGATTCAGTGTCCCACGTCGTCCTGTGATGGCATGGGTCATATCTCGGGAAACTACGCTACCCACAGAAGCCTCTCTGGTTGTCCGCGAGCTGATCGATCTCAAATACAAGCGCATTCACAAGAACTCAAGTGTCCAACACCTGGTTGTGATGGTTCTGGTCACGTGACTGGAAATTACTCCTCCCATAGAAGTTTATCAGGATGTCCAAGAGCAAATAAGCCAAAGAGCAAACCCCGCGATGGACAAGACTCCGAACCATTGAGATGTCCTATCCCAGGCTGTGATGGTTCTGGTCATGCTACcggaaaatttttgtctcatCGCAGTGCATCCGGTTGTCCAATTGCGAATCGACAGAAATTGAGAGTACTGGAATCTGGCGGTAGTGTCGAGCAACATAAGGCAGTGGTAGCAGCGCCAGCGATGAAATTCGAAGGTGTTAATTGTCCCACTCCAGGATGTGATGGAATTGGTCACATAAATGGTTCATTTTCAACGCACAGATCACTATCAGGATGTCCCATTGCGGGGCATGCAGTGAAAAAGCCAAAATTCGAGGACATGGCAATGTACAGCAAAGGAATCACCGGTGAGAATGTAGTGACAATTAAAATGACCTCTTGTACTTTTTAA
Protein Sequence: MNLEEFSVHCMNMRRQSLNIASRSAPRGRDGKELIQCPTSSCDGMGHISGNYATHRSLSGCPRADRSQIQAHSQELKCPTPGCDGSGHVTGNYSSHRSLSGCPRANKPKSKPRDGQDSEPLRCPIPGCDGSGHATGKFLSHRSASGCPIANRQKLRVLESGGSVEQHKAVVAAPAMKFEGVNCPTPGCDGIGHINGSFSTHRSLSGCPIAGHAVKKPKFEDMAMYSKGITGENVVTIKMTSCTF

Sequence clustering based on sequence similarity using MMseqs2