Basic Information

Insect: Leptopilina clavipes
Gene Symbol: ci
Assembly: GCA_001855655.1
Location: JUFY01034434.1:13164-22936[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.00024 0.025 15.5 0.4 3 23 478 501 476 501 0.94

2 5 0.083 8.6 7.6 0.2 1 23 509 536 509 536 0.85

3 5 0.0002 0.021 15.8 3.0 1 23 542 566 542 566 0.98

4 5 0.00024 0.025 15.5 1.8 1 23 572 597 572 597 0.97

5 5 7.6e-06 0.00078 20.3 0.2 1 23 603 628 603 628 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.00024	0.025	15.5	0.4	3	23	478	501	476	501	0.94
2	5	0.083	8.6	7.6	0.2	1	23	509	536	509	536	0.85
3	5	0.0002	0.021	15.8	3.0	1	23	542	566	542	566	0.98
4	5	0.00024	0.025	15.5	1.8	1	23	572	597	572	597	0.97
5	5	7.6e-06	0.00078	20.3	0.2	1	23	603	628	603	628	0.97

Sequence Information

Coding Sequence: ATGCAGGACTGCATTTCCGGCATGGGAAGCCAGGCACGTTCTCCCTTTCCGGGAATACAACCTGACCCCGTCCTTGAAGGACGGCGCCAGTGTTCTGCATTTTTGGCTAAATTAACTGCGTTCACAAAAAATACAGACCCCATGTGgtttttatctgaaaaaaattgtcatttagcTCGTCTAGAGATCATAGTACTGATGTCATCAAAAGTTCCATTTAGTGGATTTTTGAAGACAATTTCGAAAGAAAAGATCATCTTGGACATCCTGATATTTATTGCTATTCTGCCTGAAGATCCTTTTGGTATTCTTTCAAACCGTCCATTGTCCGCAAGTACCACGGCACTAGGAAGTCCTGGGGGTGGAAACGGGGGAGGTAATACTAGAGGTGGCGGAAACGGCGGGGACAGTGGCGGGCCCGGTAGTGGTGGTGGGGGTGGAGGAGGTGGTGAAGGGCCCACTGGAAATACGACTTCGAGTGGGGATTTCTTGCGTAGAAGTCACCCCCTATCGGAGCACACGGCTCTCCATCCCGCCTATCGGCTCAACTACATGGACCACCTTTATCACCAGCTGCAAGCCTCCTCGCACAGTCCCAACGCCTCGTTACACGgacTGGGTGGTCTGGGGCCGGAGTACCTTTTGCACGCTGCTGGTCCTGGTAGCACAATTGCTTCTTCGgaatttcctttttcaattGATGgTTCAAGACTGGGAAGCCCACGAGCATCGGCAATAAGGGCGAGTCGTAAAAGAGCTTTAAGTAGTTCTCCATATTCGGATCGTTTCGACATCGACAGTATGATTAGAATCAGTCCAAATAGTCTAGCGTCCATAGTAAATGGATCACGAAGTAGCAGTGCAAGTGGCAGCTATGGACATCTTTCAGCTGCTATGAGTCCAGCACTGGGAATGCATCCTGGAATGACACCGCATCTTCAACAACTGCAAGCTCACCTGTTGCGAAGCGCTGCTGCCGCGGCTCTTTTACCACACGCTCATCCCTTACAACCACCCCatccaccaccaccaccagcACAAGCCACTCATCCCCATGGGCATTCACACCCACATTCACATTCCCATCCTCATCCCCATGTTCATTCACATGGTCATTCTCACAATCTCAGTCCGCACTCTCAGCTCTTCCCAGTGTCGCCACATTCCACTGGAACGACCGCCATTGCGAATCATGTCGGAGGAGTACCCACCAAAAGTGAAAATGTGGATTCATGTAGAAAAACATCAGACGTCTCGAGTAGATCTATCACCGCCGAGGCTGATACATCGACCCGAAGGTCGTCGACAAAGGTGAAGAAAGAGCCAGCCACGACAACAACGACCACGACGACGATACCTCCAAGTCATCCTCAAGGTAACAGTCCAAGTGAAGACCTTCGTGATGAGCCCGGTGACTTTATTGAAACCAATTGTCATTGGAGGGATTGTGGTCAAGAATTTCCATCTCAGgatGAACTGGTCAAGCATATCAATAATGATCATATCCATGCAAACAAGAAAAGCTTTGTTTGTGGATGGGAAGATTGTTCCCGGAAGGAAAAACCCTTCAAAGCTCAATACATGTTGGTTGTTCATATGAGAAGGCATACTGGAGAAAAGCCACACAAATGCACTTTCGAAGGCTGTTTTAAGGCGTACTCAAGGTTGGAGAACCTAAAGACGCATTTAAGATCTCATACCGGTGAGAAACCGTACACTTGTGAATATCCTCATTGTCAAAAAGCGTTTAGCAACGCTAGTGATAGAGCCAAGCATCAGAATAGAACACATTCTAATGAGAAACCGTACGTCTGCAAGGCGCCAGGTTGCTCGAAAAGATACACGGACCCGTCATCTCTGCGAAAGCACGTCAAGACCGTTCATGGAGCAGAGTTTTATGCAAACAAGAAGCATAAAGGTGGGAGTGGTGATGGAACTGGCAGTGATGAACCTGGAATGGGAGGCCAGAGCAGTCCAAGCAGAAGCGATTATCTTCATCCCAAGACTCCTAGTTTGTCAAGTCCCAGTATCAAGTCTGAAAGTGAAGCTAACAGTCCTCCAAGTATGATGCAACAGCAAGGAAGTCCTCTTCACGTAACCACTTGCAATGAAGACTCGAATGGAGTGAATATTGGTCCAGTGTCAGCTGATGGAGTCGTCTTCGCTGAAGAGCCATTTAATGAAGAACCAGAGGATCTGGACATCGCTGATCTTCCAGTTGCTCTTCGAGCTATGGTCGGTGGTCTCGAGGTTCAACAACTTCAGCCCCTATCAAGGAATCGCCTGAAGGGAAGATTATGTTCGAAGCCATCATCAATGTCTCAGATTTCACCCGGAGGCATCAGAGGGACCCGCGGATTAATGGAATCTCAGGGAAATATTGGTGACCTGAACAAGAGAATCACTGATCTCAAAATGGAAGGCGTGCCCAATAGGCAAACGAGTCTTTCTGACTTGCAACTGAGACTTCAACCTCTCAGTGAGCCACGAAGGGACAGTAACAGCACTGTCAGTACTTATTACGGAAGCATGAAATCTACAGATTTCGGAAGTAGAAGAAGTAGCCAGGCAAGCGGAGTCAGTGTTATGGGTAGAATTGGAACCATGGGACCTGGAAGTTTCTATGATCCCATCAGCCCTGGTACTTCAAGAAGAAGTAGTCAAATGAGCACAGCTTCCAGTAGAATGAATCCTGCGGTTCATCTCCAAGGACCCTACTCCACCAGTAATTTAGTCGTCCAAACACAGAACATGTCTCTCCAGGGTCCTCAGGGTATTACCAGTGACTGGATGTCAACGAGTCATTTCCAGCAACCTTCAGTAGATCGTCGAATGTCCGAACCCGCCAGGCAATTAGGACAAAGAGTATCACCGCCAATGCCTCCAAGACCCAGATCAGCCCAGTTGCCGGAGTTGCATCCCAATCAGGAAGTAATTCTAGACGAGGTTGGCGAAGGAGAAATGGTGGAGAATAAACTCGTCATGCCAGACGAGTTCCTGCAGTATCTGAATCAAGTCCAAGCGGGTGGGAATCAAGTCAGTTATCGAGGGAGTCCTCTGCCGAATTGTCGTTCACCAATCTGTACAAACCCTCTTCATTGTCAACGACAGCAACAAACTTGTAATTACAATCCACAGCATCAAATATCCCGTTGCTACATGTCCCAACAATCAAATCAGCAACAAAATTGCTCTGATTACGGAAACAATTCTTCTTATTCCCAGTGTCAAAATTCCCGCATTGCACAAGCTTCCTACTGTCCTCCACAAAATTTCCCATCTCAGAATTGTTCCTCACAAATCGCTAGTCCAGGATCTGTACAGGTGATGTCACCAGGATCTCATTATGCACCGAGCCACGTCAGCGATCAGCCAATTAACTCACCCGCGGCTGGAGCTCTTCCTCCTCAACAAGCCCCACAAAACCTCCAAACCAACACTGCTCAATTAAGTAGAAATTGCACTCAGAACAATGATCATGGATTCTATCCAGGTTATTGTCAGGGTCAAGCGGGTGTCAATTGTAACAACCAACAAATGAACACTCAACCTTGTTCTCCATTGCATACGCAAACCCCGCAATCCTGTTCTGCGGCGCACATGAGCAGACCCGTTGGTGGTCCGCTGAGTTGTCAACCTCTCTCACCCCACTGTCCCGATCAGCAACTACAAACTCATCGACCCATCCCTGGCAATATGGTGCACAATCAATGCGCCATGTCTCCTGCCAGTGATCAGTGCCATCAGCAAATGCACAACATTACCGAACCCCACAGACATATTCCCAAACCACCGTCGACAGTTCAACCAATGACAGTAGTGGAGCAATGTCACCGAGTGGGTCCAGTTTGTTCACCATCGGGTCTCGTCAATCAGAAACATTCGTCACCCATGAATCCTGATATGCAATCACCACAACGAATGCAAACATCTCCATGTCCACAAATGATGGGTAATTGTCAGCATCCAAATGGCAATCATCGATCGAATCTCACAATTCCGGCTGCCAATACACCCAAGGAGATGAGAGGTTGCACCGAAAGCAATTGTCACGTTCAGTTCTGTTCCCATGGCTGTCATGCACAGTCTAATGATCCTTCGCGTTACAATTGCACAAATGGATGTCAATGGGATTATGGCGCTGATCAGTGTTATCACAATCAGTCTGGTAACACACAAGAGATTCAGTGCAGGGATATCAGTCAATCACAACAAGGATCTCCAATGAAACCACCGCAGGGAATGCGACAGGATTCATACAGAAGGACTCTTGAATACGTTCAACAATGTAGAAATTGGTCTGGAACTGCTCAAGTTCATGAAGCAAGTGTCTCGAGCTCCACTCATCCCATGTCGTTACCGCAGCCTCTTCCAGCAAGTGCTAACATGATCGTCAATGACATGACATCTTCTCTCAGCTCTTTGCTCGAAGAAAATCGTTATTTGCAAATGATTCAGTag
Protein Sequence: MQDCISGMGSQARSPFPGIQPDPVLEGRRQCSAFLAKLTAFTKNTDPMWFLSEKNCHLARLEIIVLMSSKVPFSGFLKTISKEKIILDILIFIAILPEDPFGILSNRPLSASTTALGSPGGGNGGGNTRGGGNGGDSGGPGSGGGGGGGGEGPTGNTTSSGDFLRRSHPLSEHTALHPAYRLNYMDHLYHQLQASSHSPNASLHGLGGLGPEYLLHAAGPGSTIASSEFPFSIDGSRLGSPRASAIRASRKRALSSSPYSDRFDIDSMIRISPNSLASIVNGSRSSSASGSYGHLSAAMSPALGMHPGMTPHLQQLQAHLLRSAAAAALLPHAHPLQPPHPPPPPAQATHPHGHSHPHSHSHPHPHVHSHGHSHNLSPHSQLFPVSPHSTGTTAIANHVGGVPTKSENVDSCRKTSDVSSRSITAEADTSTRRSSTKVKKEPATTTTTTTTIPPSHPQGNSPSEDLRDEPGDFIETNCHWRDCGQEFPSQDELVKHINNDHIHANKKSFVCGWEDCSRKEKPFKAQYMLVVHMRRHTGEKPHKCTFEGCFKAYSRLENLKTHLRSHTGEKPYTCEYPHCQKAFSNASDRAKHQNRTHSNEKPYVCKAPGCSKRYTDPSSLRKHVKTVHGAEFYANKKHKGGSGDGTGSDEPGMGGQSSPSRSDYLHPKTPSLSSPSIKSESEANSPPSMMQQQGSPLHVTTCNEDSNGVNIGPVSADGVVFAEEPFNEEPEDLDIADLPVALRAMVGGLEVQQLQPLSRNRLKGRLCSKPSSMSQISPGGIRGTRGLMESQGNIGDLNKRITDLKMEGVPNRQTSLSDLQLRLQPLSEPRRDSNSTVSTYYGSMKSTDFGSRRSSQASGVSVMGRIGTMGPGSFYDPISPGTSRRSSQMSTASSRMNPAVHLQGPYSTSNLVVQTQNMSLQGPQGITSDWMSTSHFQQPSVDRRMSEPARQLGQRVSPPMPPRPRSAQLPELHPNQEVILDEVGEGEMVENKLVMPDEFLQYLNQVQAGGNQVSYRGSPLPNCRSPICTNPLHCQRQQQTCNYNPQHQISRCYMSQQSNQQQNCSDYGNNSSYSQCQNSRIAQASYCPPQNFPSQNCSSQIASPGSVQVMSPGSHYAPSHVSDQPINSPAAGALPPQQAPQNLQTNTAQLSRNCTQNNDHGFYPGYCQGQAGVNCNNQQMNTQPCSPLHTQTPQSCSAAHMSRPVGGPLSCQPLSPHCPDQQLQTHRPIPGNMVHNQCAMSPASDQCHQQMHNITEPHRHIPKPPSTVQPMTVVEQCHRVGPVCSPSGLVNQKHSSPMNPDMQSPQRMQTSPCPQMMGNCQHPNGNHRSNLTIPAANTPKEMRGCTESNCHVQFCSHGCHAQSNDPSRYNCTNGCQWDYGADQCYHNQSGNTQEIQCRDISQSQQGSPMKPPQGMRQDSYRRTLEYVQQCRNWSGTAQVHEASVSSSTHPMSLPQPLPASANMIVNDMTSSLSSLLEENRYLQMIQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00011508;
90% Identity: iTF_00881578;
80% Identity: -