Basic Information

Insect: Leptopilina clavipes
Gene Symbol: -
Assembly: GCA_001855655.1
Location: JUFY01019291.1:34486-40786[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.00014 0.015 16.3 2.2 1 23 427 449 427 449 0.96

2 18 2e-05 0.002 19.0 1.9 1 20 455 474 455 477 0.94

3 18 3.3e-05 0.0034 18.3 0.7 1 23 483 505 483 505 0.98

4 18 8e-05 0.0083 17.1 4.4 1 21 511 531 511 533 0.95

5 18 2.5e-05 0.0026 18.7 4.6 1 23 539 561 539 561 0.99

6 18 2.5e-05 0.0026 18.7 5.3 1 23 567 589 567 589 0.97

7 18 9.4e-06 0.00098 20.0 7.1 1 23 595 617 595 617 0.97

8 18 9.2e-08 9.5e-06 26.3 2.7 1 23 623 645 623 645 0.98

9 18 6.8e-05 0.007 17.3 6.7 1 23 651 673 651 673 0.97

10 18 2.1e-05 0.0022 18.9 5.8 1 23 679 701 679 701 0.98

11 18 5.6e-07 5.8e-05 23.8 2.9 1 23 707 729 707 729 0.98

12 18 8.3e-06 0.00086 20.2 7.8 1 23 735 757 735 757 0.98

13 18 2.6e-05 0.0027 18.6 9.1 1 23 763 785 763 785 0.98

14 18 3.4e-05 0.0036 18.2 7.5 1 23 791 813 791 813 0.98

15 18 0.0016 0.17 12.9 8.8 1 21 819 839 819 841 0.94

16 18 1.3e-05 0.0013 19.6 0.4 1 23 847 869 847 869 0.98

17 18 0.03 3.1 9.0 4.5 1 23 879 901 879 901 0.98

18 18 4.9e-07 5e-05 24.0 1.3 1 23 907 929 907 929 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.00014	0.015	16.3	2.2	1	23	427	449	427	449	0.96
2	18	2e-05	0.002	19.0	1.9	1	20	455	474	455	477	0.94
3	18	3.3e-05	0.0034	18.3	0.7	1	23	483	505	483	505	0.98
4	18	8e-05	0.0083	17.1	4.4	1	21	511	531	511	533	0.95
5	18	2.5e-05	0.0026	18.7	4.6	1	23	539	561	539	561	0.99
6	18	2.5e-05	0.0026	18.7	5.3	1	23	567	589	567	589	0.97
7	18	9.4e-06	0.00098	20.0	7.1	1	23	595	617	595	617	0.97
8	18	9.2e-08	9.5e-06	26.3	2.7	1	23	623	645	623	645	0.98
9	18	6.8e-05	0.007	17.3	6.7	1	23	651	673	651	673	0.97
10	18	2.1e-05	0.0022	18.9	5.8	1	23	679	701	679	701	0.98
11	18	5.6e-07	5.8e-05	23.8	2.9	1	23	707	729	707	729	0.98
12	18	8.3e-06	0.00086	20.2	7.8	1	23	735	757	735	757	0.98
13	18	2.6e-05	0.0027	18.6	9.1	1	23	763	785	763	785	0.98
14	18	3.4e-05	0.0036	18.2	7.5	1	23	791	813	791	813	0.98
15	18	0.0016	0.17	12.9	8.8	1	21	819	839	819	841	0.94
16	18	1.3e-05	0.0013	19.6	0.4	1	23	847	869	847	869	0.98
17	18	0.03	3.1	9.0	4.5	1	23	879	901	879	901	0.98
18	18	4.9e-07	5e-05	24.0	1.3	1	23	907	929	907	929	0.97

Sequence Information

Coding Sequence: ATGAATAGTGAACAACATTCGCTGCCAGCGACTACGCAGGCACAGCAAGAGGAAGTAAACACTGGTCAAAGTGGTCGTCCTTCGTATCCGGGTGGTTTGCCTGCAACAACCAGCCTTGGAAATGTAGGAGGCACACCGCATTCGTCTGCGGACCTTCGTGTAGGTACAGCAGTAGCGTTAGCTTCCTCGGTAGCTAAATATTGGGTCCTCACGAATCTATTCCCGGGACCGATACCGCAGGTCTCAGTTTATCACCATCCCCACCATAACGCCTCACATAGAGGTGGTGGAGGTGGCGAAACTCCTACGAAGGAGTCACCATCCACTCTCAATCAGGAAATGGCATTGGCAACAAGTTCTCACCATCAGAATGCACCttctcatcatcatcatcaacctCCCGTTAGTACCAGCAGTCATCACAGTTCGTTGCAGTCTAATACGCAGATTCCGGTATCACTTCCTGGTTTGAATCTGGATGGAAATCACATACCCGCAAGCCATTTACAAGCAGCACACGCTCAAATGCAGCAACAGATGCAATCTCAACAACAAATGCATCAACAGCAATCCCAACAGCAACAACAATCGCATCATCAGATGCAGAATCACCAAAATGCCCAAAATAATGCACAAGCAGTCCAAAATCAGAATTCCCAAAGAGACGATAAAGTGAAAGATGAAAGTGGAAGCTGTACAACAGAACGATGTAGTGATAATCAAGTTCATTGCCAAGTTCAATGTGATCTTCAATTACAAGCACCTCAAGATTTGCAGCAAAGTCTGATGCAGCAACAAATTGGTGTCAATATTACCGGCAGCTCAGGAGACAATGGGAATCCAAATAATTCAGAGAAATCAGAAAAGAAGGAAGATATGCGTCAAATTAATATGGCACAATTTCAAGTTCCGGATTTAAAACCCGGTGGTCATATGATGGATGTAAGAACTGCTGATGGATCAGTAGTGAAAATCAGCGCTGGAAATGAACAAGATTTGGCTAAAAGTCTTGGTGTCGAAATGGtgcaaaatatgtataaaGTAAATGTAGAGGACATTAATCAGCTTCTAACGTACCATGAAATTTTCGGCAAGCTACAAAGTGAAATAGCAGCAGGAACAACTTTAGTCGGTGGAACCGTACCCACACAGACAGTTACCACAATCCAAAATGGAGCACCAATAGTGCAACAAgttcagttaaataaatttgacattaaaaccAGTGATGGAGAAGCAACACCAGGACCGAGTGCGTCACCAGTGTCCGTCGGTAGTCATAATTGTGACGtttgtggaaaaatatttcaatttcggTATCAATTGATTGTACATCGAAGGTATCATACGGAAAGAAAACCGTTTACATGCCAGGTTTGTGGAAAGGCCTTTTCCAATGCAAACGATTTGACTCGTCATGGTAAATGTCATTTGGGAGGATCAATGTTTACGTGTGCTGTATGCTTCCACGTTTTCGCCAATGCTCCATCTTTGGAACGCCATATGAAACGTCACGCAACCGATAAACCATACAATTGTACAGTTTGTGGCAAAAGCTTCGCTCGGAAAGAACATCTTGACAATCATACTCGTTGCCATACTGGAGAAACTCCATATAGATGTCAATATTGCGCAAAAACATTCACACGCAAAGAACACATGGTGAATCATGTGCGCAAACACACTGGTGAAACTCCACATCGATGTGACATTTGCAAGAAAAGCTTTACGAGAAAAGAACATTTCATGAATCACGTGATGTGGCATACAGGAGAGACCCCCCATCACTGTCAAGTTTGCGGTAAAAAGTATACTCGCAAAGAACACTTGGCTAACCACATGCGCTCCCATACCAATGACACTCCCTTCCGATGCGAGATATGCGGTAAGTCGTTTACAAGGAAGGAACACTTTACGAACCACATTATGTGGCATACGGGCGAAACACCTCATCGTTGTGACTTCTGTTCAAAAACATTCACACGAAAGGAGCATCTTTTAAATCACGTTCGACAGCACACGGGTGAGTCTCCACATCGATGCGGCTTCTGCTCCAAATCGTTCACCAGAAAGGAACACCTTGTTAATCACATCCGCCAACACACAGGTGAAACACCCTTCCGTTGTCAGTACTGTCCGAAAGCTTTCACGCGAAAGGATCATCTGGTAAATCATGTTCGTCAACATACGGGTGAGTCACCGCACAAGTGTCAGTATTGCACCAAATCATTCACGAGGAAGGAACATTTGACCAATCACGTGCGTCAACACACAGGCGAATCACCGCATCGATGTCATTTCTGCTCTAAATCTTTCACCCGAAAGGAACATTTGACGAATCATGTACGCATCCATACAGGAGAATCACCACATAGATGTGAATTTTGTCAGAGGACATTTACCAGAAAAGAACATCTTAATAATCATCTTCGTCAGCATACTGGAGATTCCTCTCACTGCTGTAACGTTTGCTCTAAGCCCTTCACACGAAAGgaGCATCTTGTAAATCACATGCGCTGTCACACTGGGGAGCGTCCATTCGTTTGCACAGAATGTGGAAAGAGTTTCCCATTAAAGGGCAACTTATTATTCCATATGCGATCGCACAACAAAGGAAGTAACGCTGAGAGACCGTTCCGCTGTGATCTATGTCCCAAGGATTTCATGTGCAAAGGACATTTGGTATCTCATAGAAGATCTCATTCAGATGAGCGACCACACAGTTGTCCAGACTGTGGCAAGACTTTTGTTGAGAAAGGTAATATGCTTCGACATTTACGAAAACACGCCGCTGAAGGACCACCGACCCAAGTAACCACTCCATCGGCAATTCCACAACCTGGAGTTTTGCCAATTCCAGCAGCAGCTGCTGTTCTTGTTGGACATCCCCTCGCGCCTCCTGCGCCTTCCGTTGTACCTCAACATACCGTTGTTGTACCCACTCCTCCCGGTGTATTAGCTTCTTactaa
Protein Sequence: MNSEQHSLPATTQAQQEEVNTGQSGRPSYPGGLPATTSLGNVGGTPHSSADLRVGTAVALASSVAKYWVLTNLFPGPIPQVSVYHHPHHNASHRGGGGGETPTKESPSTLNQEMALATSSHHQNAPSHHHHQPPVSTSSHHSSLQSNTQIPVSLPGLNLDGNHIPASHLQAAHAQMQQQMQSQQQMHQQQSQQQQQSHHQMQNHQNAQNNAQAVQNQNSQRDDKVKDESGSCTTERCSDNQVHCQVQCDLQLQAPQDLQQSLMQQQIGVNITGSSGDNGNPNNSEKSEKKEDMRQINMAQFQVPDLKPGGHMMDVRTADGSVVKISAGNEQDLAKSLGVEMVQNMYKVNVEDINQLLTYHEIFGKLQSEIAAGTTLVGGTVPTQTVTTIQNGAPIVQQVQLNKFDIKTSDGEATPGPSASPVSVGSHNCDVCGKIFQFRYQLIVHRRYHTERKPFTCQVCGKAFSNANDLTRHGKCHLGGSMFTCAVCFHVFANAPSLERHMKRHATDKPYNCTVCGKSFARKEHLDNHTRCHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGFCSKSFTRKEHLVNHIRQHTGETPFRCQYCPKAFTRKDHLVNHVRQHTGESPHKCQYCTKSFTRKEHLTNHVRQHTGESPHRCHFCSKSFTRKEHLTNHVRIHTGESPHRCEFCQRTFTRKEHLNNHLRQHTGDSSHCCNVCSKPFTRKEHLVNHMRCHTGERPFVCTECGKSFPLKGNLLFHMRSHNKGSNAERPFRCDLCPKDFMCKGHLVSHRRSHSDERPHSCPDCGKTFVEKGNMLRHLRKHAAEGPPTQVTTPSAIPQPGVLPIPAAAAVLVGHPLAPPAPSVVPQHTVVVPTPPGVLASY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00899003;
90% Identity: iTF_00200974;
80% Identity: -