Lcla011594.1
Basic Information
- Insect
- Leptopilina clavipes
- Gene Symbol
- sens
- Assembly
- GCA_001855655.1
- Location
- JUFY01000148.1:108-13408[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.00043 0.57 10.8 3.5 14 39 88 110 81 130 0.73 2 4 0.085 1.1e+02 3.4 0.7 19 29 121 131 112 138 0.81 3 4 6.5e-06 0.0086 16.6 2.2 3 41 134 168 132 170 0.86 4 4 0.012 16 6.2 0.0 18 38 176 193 173 199 0.75
Sequence Information
- Coding Sequence
- atggaaaaagagggaaaaatttctaaaggaatgtttaaatctttaattacAGATGAGGAAGTGCCGTTAAATTTGAGCACGAAACCTAGTGATGTTTCTTCGACGAATAGTCGGAAGAGCGAAATCTGGTCTCCTGGTTCGGTCTGCGAAAGGGAAGCCAGGGAGACGAGGGTACCCTCTGATCAACATTCCCCTTCGGCAACGACGCCGGTAATCACTAGACAAATTCACCATTCCCCCCTCACACCACCCTCGTCATCCGAGAGAACCTTTCAGtgtAAACAGTGCGGAAAGGCTTTTAAGAGATCTAGTACATTAAGCacacatttattaattcattccGATACAAGACCCTATCCCTGCGACTACTGTGGCAAAAGATTTCATCAAAAGTCCGACATGAAGAAGCACACCTACATTCACACTGGTGAGAAACCGCACAAATGTGTTGTGTGCGGAAAGGCGTTTTCCCAAAGTAGCAATTTGATAACTCACATGAGAAAACACACGGGATATAAGCCCTTCCAATGTGGTCTTTGTGAAAAGGCTTTCCAAAGAAAGGTCGACCTCAGAAGACATCGCGAGGGTCAACATCCGGCTGCACCTGCTCTTGATTATCGATCTCTTCAGGTACCACCTCCCATTAGACAATCACCCCTACCCCATCACCTTATCACATGA
- Protein Sequence
- MEKEGKISKGMFKSLITDEEVPLNLSTKPSDVSSTNSRKSEIWSPGSVCEREARETRVPSDQHSPSATTPVITRQIHHSPLTPPSSSERTFQCKQCGKAFKRSSTLSTHLLIHSDTRPYPCDYCGKRFHQKSDMKKHTYIHTGEKPHKCVVCGKAFSQSSNLITHMRKHTGYKPFQCGLCEKAFQRKVDLRRHREGQHPAAPALDYRSLQVPPPIRQSPLPHHLIT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00015608;
- 90% Identity
- iTF_00880741;
- 80% Identity
- iTF_00880741;