Basic Information

Gene Symbol
ARID5B
Assembly
GCA_001855655.1
Location
JUFY01021332.1:6096-10580[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.9e-23 6.9e-20 71.8 0.0 1 89 229 315 229 315 0.95

Sequence Information

Coding Sequence
ATGCGGGGGGATGAAGTGCTGACGATATCGGAGAAGGTTGTCGTTCGTGTTCACGACCTTGTGACTTGGTTGGCACCTTCGTTGGAATGGTCTTGGGGTAGGGAAGTGTCGTATCCACCAACTCCATTGAGTTCACCGGAAAACACACCATCAAATCATGACGTGGGTCAACCTCAGGTTTTGACGGATCCAGGTATCGATTTCACGGACGTTGACAAACAACAGCACGAATATGAGAGCAATCACAATCCAATCAAACAGTTTGACCCCAGTTTACAAACAAAAGTTATTGTACTCTCCTATCCGCGATATTGTCGATATCGATCTCTTCTTCGAAGGCTTGAAGGATCGCAACCTTCATGGTTATGGACTTCGATAGCGGCAGCGGTGGGCGGTTTCACGGCTACGCCTGGTACAAGGGTCCTTTTTTGCAGAGATACGTTCGACTATCCTGACCTTGAAACACACGAACTACTTTGCAATCACTTAGctCCTAAATTAAAAGGAAGGCCTagaagaaaacgaaaaaagcGGAGTGTCTCGCCAGGTGAATCCAGTAATGAAAGTGAAGCCTCGGTTGCTTCGTCTGTAGTTGCATCGACGTCCAAAGTCTCTTCCTCAAACTCCTTGATCAGTAGATCGTCTTCCTCGGGAGTTCGTCGCAGCGAACGGAAAATGAGCGttgaggaaaaaaagtttttgtcgGATGTCGACAAATTCATGAATTCACGAGGGACACCTGTAGGAAAGATGCCCTTATTGGGTTATAGGCAAATTGATCTATTccttttttatacaaaagtaCAAACATTGGGTGGTTATGACTCTGTGAGTGCTGGCCGTCTTTGGAAATCCATTTACGATGATATTGGTGGTAATACCACGTCTACAAGCGCTGCAACAATTACAAGAAGGCATTACGAAAGGTTATTGTTGTCATACGAAAGATATCAAAGGGGTGAAGAATCGAAAATCAGACCAGCTCATGGAAGGCGAACAAAAACAAGTAGTTCGTCAGAGGAGGCAATCGAAGTGAAAGATGAGCCTGAGGATTCCTATTCACGAGAACCGTCACCTCCTAGTGGAACACCTAATTCAACGACCGTCACTCCCTCTTTGCAGTCGATTTTGTCGACATCGGCGCTTCTCCCGGGTGAGAAACCTCGAATGGAGAGTGGGAAGACATCATCGTTACGAAGTGTGAGAGTGAAGCCTGATCGTTTAAAATCTCTAAATACAATAATTGCTAATGCGCCGTCTGCCAGCCAACTGCCAAGTCCACCACCTTCCTCGACAACGTCGTCGTCAACTCCAAATAGTACGCCATCGACGACGCCAACCGGTGGCAGTCAAAGTGTTTTAGAGAGGCAGCTCAATAGTCCGTTAATGTCTCAACAAGTGCCGCCACCGAGTTCACCACCGGGTCTACCTGTCAGCGCTGTGACGTCGAATGCGTCAACCGTTGTCACTCTAACACCACCGCCCGAAAAGGACATCAAGGAAATTAAATTGGATCCAAAACAAACCACCCTGCTGGCTCAGGGCAAGGAAAATATTCCCCTCTTCGACGAGAAGCCAATTTTCCTGGAAAAGCCAATAGTACCACCGAGATCGCCCGAAGTGATAGATCTCGAGAACGAGAGCGACTCAAGTAgggataaaattattattcccaGTTTCAAGAGGCAAAAACTCGAAATATTACGCGAAGGTGGCTTGGAGGTGACAGCGGTCGACTCGCGACCGAGTGTCATTCAACCAAATTCCACGCCTTCGCCCACAAACGTCAAGTCTGAAGAAAAACCCCTCGTTTCCTTATCGCAAATCCCAGCGCCATCGATACAAAAACACATCTCCGTCACGGTGACACCTGACATTGGTCACATACTTCCACCAACGCAGGAGAATCacaatcatcatcatcaccacGTCAAGCATCAAACACCAACGAAACAATCCACGAATCATAATTCAAATAGTACCTCACCCATCAGTCGTGTCATCAACCTTGGGAACTCGAACGCTGCCCTGATGCAACTCTACGCAAATGCAAACGTTGCCGTCTCGAATACAACGACCACGCAATCGTCGAATCACCGATTCGTGGCACCTGTCATCACAAACGGACGTGTCGTACCGCCCAGGGTCACGCAATCCCGATCGATATTCGCACACAACGAGAAAACTGTCTACGGTAATCCTAAGGACATTCTCAGCACCCCGAAATATCTACCTCCAGTCGTTGCCGTTCAACCGCCGCCGCCGCCACCACCACCAACCAGGAACGAGTGCCTGCCAACCGGTGTTCTCGATCTCACCCAAAAGCAACAACCAACATTCTTCAGGCCCAGTTTGGAAATCGTTCGCGTTCCCGTTGTGCCACGGCCAAATCCCATCGATCTCGATACAAGAAATGCGcacaacaaaacaaaacatcACGAGTCACCGAGAAAGGAGCAATTTCCAAATTATCCAAGTCTCCTCGACAGTCGGACAATGGCCTCGAACAATCTCGAAATAACGCTCGTGAATCCAAAAAAACAGCATTCCAATTCACCATTGCCAAGTCCACCAACGAGAAATTGCATGCCAATTCAAAGGAGACAACATCAACAACATATGAATGGAAAATATCCAGTTAGGACTGAACCTGTCTCACCGTACACGCCACGAAAACCAGTAATACCGAACGTACCgaatttaagtcaattaaattccTCCACATCGAGGTCGTCGAACAACAATCAACAACAAATGTCATCAATTGACAAGAGAAAAACACCGGATCTTCATCGTCGGATTAGCGAGGGTGACAAAACAaatcaacaaattattgatgtcACGCATAAACATAATGATCCATCACGAAGGCACAGTGTACCAAATGCACCAACGGGTTTTGTTCCAAATATGACGCAAAATAATGCGGCATTTCTCGCACAATTGCCAAATAATCCAGGCAAATTCCTTCCCATGATCGATCCAATTTATTATCCAGCATTGTACAATGGTTTCTTTCCACCGCCAATGTCAACGGCAACAACTGCTCCGTTCCTATCACCAGAATTCAACGCTTATTACAAGGAACTATTGGCATCCTCTTCACAATCAAGACTGGGGATCGCGGGACAGTCACCAACTGTTCCAACGTCCAAGTAG
Protein Sequence
MRGDEVLTISEKVVVRVHDLVTWLAPSLEWSWGREVSYPPTPLSSPENTPSNHDVGQPQVLTDPGIDFTDVDKQQHEYESNHNPIKQFDPSLQTKVIVLSYPRYCRYRSLLRRLEGSQPSWLWTSIAAAVGGFTATPGTRVLFCRDTFDYPDLETHELLCNHLAPKLKGRPRRKRKKRSVSPGESSNESEASVASSVVASTSKVSSSNSLISRSSSSGVRRSERKMSVEEKKFLSDVDKFMNSRGTPVGKMPLLGYRQIDLFLFYTKVQTLGGYDSVSAGRLWKSIYDDIGGNTTSTSAATITRRHYERLLLSYERYQRGEESKIRPAHGRRTKTSSSSEEAIEVKDEPEDSYSREPSPPSGTPNSTTVTPSLQSILSTSALLPGEKPRMESGKTSSLRSVRVKPDRLKSLNTIIANAPSASQLPSPPPSSTTSSSTPNSTPSTTPTGGSQSVLERQLNSPLMSQQVPPPSSPPGLPVSAVTSNASTVVTLTPPPEKDIKEIKLDPKQTTLLAQGKENIPLFDEKPIFLEKPIVPPRSPEVIDLENESDSSRDKIIIPSFKRQKLEILREGGLEVTAVDSRPSVIQPNSTPSPTNVKSEEKPLVSLSQIPAPSIQKHISVTVTPDIGHILPPTQENHNHHHHHVKHQTPTKQSTNHNSNSTSPISRVINLGNSNAALMQLYANANVAVSNTTTTQSSNHRFVAPVITNGRVVPPRVTQSRSIFAHNEKTVYGNPKDILSTPKYLPPVVAVQPPPPPPPPTRNECLPTGVLDLTQKQQPTFFRPSLEIVRVPVVPRPNPIDLDTRNAHNKTKHHESPRKEQFPNYPSLLDSRTMASNNLEITLVNPKKQHSNSPLPSPPTRNCMPIQRRQHQQHMNGKYPVRTEPVSPYTPRKPVIPNVPNLSQLNSSTSRSSNNNQQQMSSIDKRKTPDLHRRISEGDKTNQQIIDVTHKHNDPSRRHSVPNAPTGFVPNMTQNNAAFLAQLPNNPGKFLPMIDPIYYPALYNGFFPPPMSTATTAPFLSPEFNAYYKELLASSSQSRLGIAGQSPTVPTSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00881787;
90% Identity
iTF_00881787;
80% Identity
-