Basic Information

Insect: Leptopilina boulardi
Gene Symbol: -
Assembly: GCA_011634795.1
Location: PHTE01001258.1:27806-34994[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.28 30 5.7 1.1 2 23 402 424 402 424 0.89

2 8 1.7e-06 0.00018 22.1 0.7 1 23 442 465 442 465 0.98

3 8 5.9e-06 0.00064 20.5 2.6 1 23 487 509 487 509 0.98

4 8 7.3e-06 0.00079 20.2 2.2 2 23 515 536 514 536 0.96

5 8 0.00012 0.013 16.3 6.4 1 23 542 564 542 564 0.98

6 8 7.8e-05 0.0084 16.9 4.5 1 23 570 592 570 592 0.98

7 8 1.4e-05 0.0015 19.3 2.4 1 23 598 620 598 620 0.97

8 8 0.015 1.6 9.8 7.4 1 20 626 645 626 647 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.28	30	5.7	1.1	2	23	402	424	402	424	0.89
2	8	1.7e-06	0.00018	22.1	0.7	1	23	442	465	442	465	0.98
3	8	5.9e-06	0.00064	20.5	2.6	1	23	487	509	487	509	0.98
4	8	7.3e-06	0.00079	20.2	2.2	2	23	515	536	514	536	0.96
5	8	0.00012	0.013	16.3	6.4	1	23	542	564	542	564	0.98
6	8	7.8e-05	0.0084	16.9	4.5	1	23	570	592	570	592	0.98
7	8	1.4e-05	0.0015	19.3	2.4	1	23	598	620	598	620	0.97
8	8	0.015	1.6	9.8	7.4	1	20	626	645	626	647	0.93

Sequence Information

Coding Sequence: atgtGCGCGCGACTTTTAGCATGTCCATTGTGCTCTCAACCTGGTTTTCATACTTTAGATGCTTTGCGAAATGGCCTCGTTAGCGTTGCAACACGACCACTCGCATGTCCAGTttgcaatgaaattttattgggaattgataaattaacaattcatTTATTTGGACATAcaataaatgcaaataattcaaatataacgcaaaatattaatcaaaataatattcaaattttacataatttacaaacaattCCCATTCAAACATggaatattcttaaaacacaaaatataCCTGAAATTCATGAGAAAACAACATCATTTGAACATAATGAACAAgaatcttcttttattttaaaagataaagaaataattataaattcacaaattacacatgataattcaaataatgaaTCAAAACAACAAGGTCAAGTgatatttcttcaaaatataagcgatcaaatttattcaacaaattgtgaatattcaaaaattgatgaaaatttaacacaacaaaataatgaacaaaagaaacaaattatcgAATCGtctgaaaataatcaaaatttaatattaacagaTTCGAATTTAAACTCAATGCAAAATAATTCTCtattggaaaataatgtaaatataatagaaaataatttgaattgtgttaatttaactgattcaaatttagaaacttctaatttactacaaaataattcaaatacaattcaaaatgagaatttaattcaaaattcattgcAAACAAATTCCAATGatcaaaataatagttttattcaaaataatatgaattcaattcaaaatgatacgaattttattcaaaattcaaatcaattggaaaaaaatttacaacaaagtcaagaaaattttcttcaagatACAAcgaatttaattgtaaataattcatctctaattcatcaaaatgaaaaaattcacaatgtggaaacaatagaaaattcatggatacaaaataattcatcAGTGATTACTGTTAAAGATACAGTTGAGAATTTAGATGAAATTCAAGAAATTacaattgtaaatgaaaataaaaagaattcctatcaaataaaatcgaatgaaaataaattgcaaaattgtgaaataaatgaaaaaacacaaaatagagaaaaaataaatgatccAATTTTACCTTATTTAAAAGCATTTCGTTTATTGGCATCGAAAGAAAAAACGGAACGTTGTAATATTTGTGGTTATCGTTGTgatgatagaaaaattttaattctacacAAACAATTAGTTCATATGATTGCCGAAAAAGATATAAATGTTCGACCTGaggatttattgaaaaattatccatGTCATTTATGTACAAAGGTATTTAAAATGAGAGGTAGTTTAATGGTTCACATGAGAGTTGCACACACTAATTATAATTCAggcTGCCTGACAATTGATTCGGAATTATCaccaaataatgaaaatggtTATAATTGTCCAATTTGtggaaagaattttaaaaaggaACAACATGTAACACAGCATTTAAAAACTCACGATGGCAAACAATGGGAATGTGATATTTGTAGTAAAATgtttacaacaaaatattttttgaaaaaacataaaaGACTTCATTCAGGCGAAATGCcatataaatgtaatatttgcGATAAAACATTTACATTTCAACAATCATATCATAAGCATAGGCTGTATCATAAGGATGATAAGCCACATACTTGTAATACATGTGGAAGATCATTTAAGGAACTTTCAACTTTACATAATCATGAAAGGATACATACGGGAGAAAAGCCATTTGCTTGTGAAACTTGTGgaAAATGTTTTCGACAACGAGTTTCATATTTGGTACATCGACGAATTCACACTGGAGTTATGCCTTATAAATGTACAAATTGTGGCAAATGCTTTCgatataaagtAAGTCAAAGAACTCATAAATGTCAAACACCAGCAACAGCAGAGGGATTATCATCGCAAAAttcggaaattttatttcaacgtCTATTGCAAATTTCCGAACCAAAGGAAAATGAAACACAAATTGTTGAAGGAAAATGTAGCgaacgaaataaatttattttattaatgaatgaaGAAGGTGAACCAATTTTACAACGACAATCTGATTTGATTGAtaatgcaaaagaaaaagaatcgCAAATTGCCGataaagaggaaaataatTGGATTCAAGAgagaaataatgtaaattataaagtatCAATGAAAGAACATGTTAATAcggaaaaattacaattagaaGTGCCACAAgatatattttcaatgatGATGTTACCAGATGAAAAAGATGTACCAACACCATCAACTGAAATGGAACATTTGAGATTATCGAGtccaattgaaaaagaaaatgtaaatgaaattaatgatACATTTTCAAATGATAATCAAAATAGATTAGAAATAATGGGAATAAGTCGTGGTAATATTCGCgaaagatttgaaaataatcctattattaattcaatgcGAACAATAGATGATGCATCATTAAGTGAACTTATTTATGGAATTGATCaagaacaataa
Protein Sequence: MCARLLACPLCSQPGFHTLDALRNGLVSVATRPLACPVCNEILLGIDKLTIHLFGHTINANNSNITQNINQNNIQILHNLQTIPIQTWNILKTQNIPEIHEKTTSFEHNEQESSFILKDKEIIINSQITHDNSNNESKQQGQVIFLQNISDQIYSTNCEYSKIDENLTQQNNEQKKQIIESSENNQNLILTDSNLNSMQNNSLLENNVNIIENNLNCVNLTDSNLETSNLLQNNSNTIQNENLIQNSLQTNSNDQNNSFIQNNMNSIQNDTNFIQNSNQLEKNLQQSQENFLQDTTNLIVNNSSLIHQNEKIHNVETIENSWIQNNSSVITVKDTVENLDEIQEITIVNENKKNSYQIKSNENKLQNCEINEKTQNREKINDPILPYLKAFRLLASKEKTERCNICGYRCDDRKILILHKQLVHMIAEKDINVRPEDLLKNYPCHLCTKVFKMRGSLMVHMRVAHTNYNSGCLTIDSELSPNNENGYNCPICGKNFKKEQHVTQHLKTHDGKQWECDICSKMFTTKYFLKKHKRLHSGEMPYKCNICDKTFTFQQSYHKHRLYHKDDKPHTCNTCGRSFKELSTLHNHERIHTGEKPFACETCGKCFRQRVSYLVHRRIHTGVMPYKCTNCGKCFRYKVSQRTHKCQTPATAEGLSSQNSEILFQRLLQISEPKENETQIVEGKCSERNKFILLMNEEGEPILQRQSDLIDNAKEKESQIADKEENNWIQERNNVNYKVSMKEHVNTEKLQLEVPQDIFSMMMLPDEKDVPTPSTEMEHLRLSSPIEKENVNEINDTFSNDNQNRLEIMGISRGNIRERFENNPIINSMRTIDDASLSELIYGIDQEQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -