Basic Information

Insect: Leptopilina boulardi
Gene Symbol: -
Assembly: GCA_011634795.1
Location: PHTE01000990.1:63354-70822[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.0033 0.35 11.8 0.6 1 23 186 209 186 209 0.96

2 9 4.4e-07 4.8e-05 24.0 2.2 1 23 214 236 214 236 0.99

3 9 3.1e-06 0.00033 21.3 0.7 1 23 242 264 242 264 0.98

4 9 0.0016 0.17 12.8 0.8 3 23 272 293 270 293 0.94

5 9 4.6e-06 0.0005 20.8 1.5 1 23 299 321 299 321 0.97

6 9 6.1e-06 0.00066 20.4 1.1 1 23 327 349 327 349 0.98

7 9 0.0021 0.23 12.4 5.3 1 23 355 377 355 377 0.96

8 9 7.9e-08 8.5e-06 26.4 0.8 1 23 383 405 383 405 0.98

9 9 0.0023 0.24 12.3 1.4 2 23 414 435 413 435 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.0033	0.35	11.8	0.6	1	23	186	209	186	209	0.96
2	9	4.4e-07	4.8e-05	24.0	2.2	1	23	214	236	214	236	0.99
3	9	3.1e-06	0.00033	21.3	0.7	1	23	242	264	242	264	0.98
4	9	0.0016	0.17	12.8	0.8	3	23	272	293	270	293	0.94
5	9	4.6e-06	0.0005	20.8	1.5	1	23	299	321	299	321	0.97
6	9	6.1e-06	0.00066	20.4	1.1	1	23	327	349	327	349	0.98
7	9	0.0021	0.23	12.4	5.3	1	23	355	377	355	377	0.96
8	9	7.9e-08	8.5e-06	26.4	0.8	1	23	383	405	383	405	0.98
9	9	0.0023	0.24	12.3	1.4	2	23	414	435	413	435	0.96

Sequence Information

Coding Sequence: ATGGAGAATAGGCCGGCGACGCTTCGTTCCAGGCGTGTCTGTCGTTTCTGTCTGACGGAATCGGAGCCGTTGAGCTACATTTATGATCGTGAAATGAGCAGATTATTTGTGGTGCCGCTTACCCTCCAGATTATGTCGTGTGTCGGCATTGAGgTATATGCGGCTGATGGAATGCCACAAATGATATGCAACACCTGTCGTTGGAATTTAGACCGctcatataaatttaaacaacaaTGTAAAAAAGCCGATGAAGCTTTACGAGCATATCCTGTATCTGGAGTATTACCCCGACCATTTCCTCCAATTTCCACCGAACCACCcgatacaaataataaaagatcAGCCGAACAACGTGCTCATAATGAACAACAAAAGAAAGCGCGACTCGATAATGGCGATCGTGAAAGAAGAGAACGTCAAGCTGAAAAACAGAGTAAAGAAGAAAGAATTGATTTATATGACGAGGAACAAATGGATCGTGGCAGTGAAGGTGAAAATGAagcaaataatgaaaaagaagatCGCAAATTAGAACCAGGTGAAGTTAGAGTTCATTCGTGTACACTTTGCGAGCGTACATTCCCCTTGAGGCAAGCACTTTTATTACACATTCAACGTGCTCATCGCGATCGTAATTACAAATGCACTGAATGCGATCGTATGTTCTTCTCTAAATACGATCtcaataaacatattttaacaCACTCAGAAGATAAACCCTACACTtgtcaaatttgtaataaacaatttgctCGCGCCAATTTATTACAACGTCATGAGAAGGTACATCGCGATGAATTACGTTACGGTTGTCAGCATTGTGATCGAGAATTTTTCACCACTgatgaattagaaaaacatGAGGAAAGTGCACACAAGGCAAACAAACCATTTCAATGTAACATTTGCAATAAACGTTTCACCTATAAACAGGGTCTCGAACGTCATGAAATGCTTCACAGCGAGGACAAGAGTTTTGTTTGTGAATATTGCAAAGAAGCTTTTCGCACGAGTACAAAACTTGCTCGTCATTTAACAACACACGCTGGTCATCGTCCATATTTGTGTAAATTGTGTCCACGTACATTCCTTCTCTCTCATCATCTCACAAGACACATGCGTTCACATTCTGTTGAAAAACGTCATGTATGCGAAGACTGTGGCAAGGCATTCAAACGCAAAGAGAGCCTTGAGGTTCATCAATTGACGCACACAAAACGTTCAGGTCTTGGTTTAACGTGCGACGTTTGTCAAGAGACATGTCGCAATCGTGCCGATTATGTGACACACATTAAACAACATATTGAAGCTGGCGAAAAAATGGGTCCCGACGGTCTACAACCAGacatcaaagaaaaaatagaaattgactCAGAAGAAGACGACGAAGAGGAACAATATTCAGACGGCGATGATGATTATGAACCACCGCCTTACATTGTCAAGAAAATTCCCAAAGTAAAAACATCAGCCGAGAGCGAGGAGGACGATAAAGAAATGCGTGACGAAAAAGTTGTTTACGTACGTGGCAAAGATGGAACAATggtaaagaaaacaataaaaacccTAATGCCAATACAAAGAAGAGACACCACCGAAATTGTCAAGAGTCCCACTCAAAAAACACCAATGAAACAAGAAGATTTACCTGTTAAACAACGTGTTGACGAAACCGAGGCACAAGTGCAAAAAATCGTCGAATCCGTCTTTAAGGAACATAAAATACCACTGAAACATCAAACAACACCAACAGAACAAAAAACACCCTCACAAAAACTCATTAGTCCAAAAGAAGAGAAACTCGAACCAAAATCACTCAATACTGTGAAAGTAATCAAGAGAATTGTTGTCAGAAAACCCGCTAGTGGCGAAACAATAGCAAAAGAATGTGAATTAGCATCACCGCAAACACCCACCTCTGGTGTTAAAGTAACAAAAAGAGTAATTGTCCGCCGTATAATTCGTCAAGGTGATACCACAAGAGAAGTAATAATGAATCCCGATGGTACTCTAATTGATCCCGCTGAACTTGCCAAATTACCCACAGGTAATGTTGTTAAACGTGTTGTTATGAAAAAATCCTTTGACAAAAGTCAAAATATACTTCAAACAATGATGCACTCACCGGAAATAAAAGCACAAGCAGCTAAAATACAAGAAACCCTTCCCGATCCTCtgaaattcgaattaaaaacaacACAAGGAAGTGGTGCAACAATTGTCGAGCAAACATCAACAAAGGATCAagagacaaaagaaaaattggaacaaCTTGAGAAAAGAGTTGAACAACAAcgattgaaaattgaagaattacaAGCACGTAAACAGGAATATGAACCAGTCGATGAAATGCTACCCGAAAGACATGACGAATCAGAGGACGAACAACAATTACCATTAAAAAGGGTATTTGTTAAAAGGAAGCAAAGTATATATGACGAGGAACAAGAATatgatgaaacaaaaataaaagacgAAGAAATACCATCATCGCAAGAATCATTTGAAGTTGAAACACCAAAGAGCAATAAACCATCAATAACAAGTTCAAAAGTttatggtaataaaaaaataattctccttAAACCAGAAGAACAACCAACAACAACTACCGATGACGttgaaattaatcaaatgAATGAGGAACTTTCCAATATTCTCGATTCATCagaaacaattgttaaaatgcAAGCAACAACATTGAGTCAATTGACAGAAATATCGGAAGCAAgtcaaaaactttatttagagaatattgaaaaagaagaaggtgGTGGTGAAGTGGAGGAGGAGGAGGTAGCTGATCAACAAATTGAACAGGAACCAATGGAGGAACAAATTATTGCCGAACAGGAAACGAATGATGAAATAATTACggaaaatacagaaaatattgaaaatattgaacatATTGAACATATTGAACAAACTCCACAGGATGAGGAGGAAAAAATGGAACTTGAAGAACCAGTTGAGGAACATATGATAAATCAGGAAACAATACAAAATGACGAGCCTAATGAGGAAGTTCAAGAAACCACATTATCATTGAGCGGTCATGAGATTTCTGCATCTGGTGATATGTTTGATCAAACAACATCGGGCTCGATTATTGatagtcaaaaaaatgataatacaCCATTGGAAGAATCTGTCATTGAATTGTCACAGGCAAATGATACAATTACTTTAAATGATACACACGATAGTCGCGATAGTCTTGAGGATAAACTCTCACAAATGGAGGGATGA
Protein Sequence: MENRPATLRSRRVCRFCLTESEPLSYIYDREMSRLFVVPLTLQIMSCVGIEVYAADGMPQMICNTCRWNLDRSYKFKQQCKKADEALRAYPVSGVLPRPFPPISTEPPDTNNKRSAEQRAHNEQQKKARLDNGDRERRERQAEKQSKEERIDLYDEEQMDRGSEGENEANNEKEDRKLEPGEVRVHSCTLCERTFPLRQALLLHIQRAHRDRNYKCTECDRMFFSKYDLNKHILTHSEDKPYTCQICNKQFARANLLQRHEKVHRDELRYGCQHCDREFFTTDELEKHEESAHKANKPFQCNICNKRFTYKQGLERHEMLHSEDKSFVCEYCKEAFRTSTKLARHLTTHAGHRPYLCKLCPRTFLLSHHLTRHMRSHSVEKRHVCEDCGKAFKRKESLEVHQLTHTKRSGLGLTCDVCQETCRNRADYVTHIKQHIEAGEKMGPDGLQPDIKEKIEIDSEEDDEEEQYSDGDDDYEPPPYIVKKIPKVKTSAESEEDDKEMRDEKVVYVRGKDGTMVKKTIKTLMPIQRRDTTEIVKSPTQKTPMKQEDLPVKQRVDETEAQVQKIVESVFKEHKIPLKHQTTPTEQKTPSQKLISPKEEKLEPKSLNTVKVIKRIVVRKPASGETIAKECELASPQTPTSGVKVTKRVIVRRIIRQGDTTREVIMNPDGTLIDPAELAKLPTGNVVKRVVMKKSFDKSQNILQTMMHSPEIKAQAAKIQETLPDPLKFELKTTQGSGATIVEQTSTKDQETKEKLEQLEKRVEQQRLKIEELQARKQEYEPVDEMLPERHDESEDEQQLPLKRVFVKRKQSIYDEEQEYDETKIKDEEIPSSQESFEVETPKSNKPSITSSKVYGNKKIILLKPEEQPTTTTDDVEINQMNEELSNILDSSETIVKMQATTLSQLTEISEASQKLYLENIEKEEGGGEVEEEEVADQQIEQEPMEEQIIAEQETNDEIITENTENIENIEHIEHIEQTPQDEEEKMELEEPVEEHMINQETIQNDEPNEEVQETTLSLSGHEISASGDMFDQTTSGSIIDSQKNDNTPLEESVIELSQANDTITLNDTHDSRDSLEDKLSQMEG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00882418;
90% Identity: -
80% Identity: -