Basic Information

Insect: Leptopilina boulardi
Gene Symbol: ECU06_1150
Assembly: GCA_011634795.1
Location: PHTE01002470.1:699-1658[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.00018 0.019 15.8 0.4 1 20 25 44 25 46 0.95

2 9 0.094 10 7.2 2.4 1 23 67 90 67 90 0.95

3 9 9.4e-05 0.01 16.7 4.0 1 23 119 141 119 141 0.98

4 9 3.5e-06 0.00038 21.2 1.6 1 23 147 170 147 170 0.97

5 9 4e-06 0.00043 21.0 0.3 1 23 176 198 176 198 0.98

6 9 3.5e-08 3.8e-06 27.5 0.6 1 23 204 226 204 226 0.99

7 9 3.7e-06 0.00039 21.1 2.4 1 23 232 254 232 254 0.98

8 9 2.6e-05 0.0028 18.4 1.0 1 23 260 282 260 282 0.97

9 9 6.6e-06 0.00071 20.3 4.0 2 23 289 311 288 311 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.00018	0.019	15.8	0.4	1	20	25	44	25	46	0.95
2	9	0.094	10	7.2	2.4	1	23	67	90	67	90	0.95
3	9	9.4e-05	0.01	16.7	4.0	1	23	119	141	119	141	0.98
4	9	3.5e-06	0.00038	21.2	1.6	1	23	147	170	147	170	0.97
5	9	4e-06	0.00043	21.0	0.3	1	23	176	198	176	198	0.98
6	9	3.5e-08	3.8e-06	27.5	0.6	1	23	204	226	204	226	0.99
7	9	3.7e-06	0.00039	21.1	2.4	1	23	232	254	232	254	0.98
8	9	2.6e-05	0.0028	18.4	1.0	1	23	260	282	260	282	0.97
9	9	6.6e-06	0.00071	20.3	4.0	2	23	289	311	288	311	0.96

Sequence Information

Coding Sequence: ATGGACGAATCATCAGAAAGAATTTCcgaattatcaattattaataattccgaatttattattgaaaatgaatatttttgtgaacATTGTCGAGAATCGTTTGccgataaattacaattaataaaacatcTTGCATTGTGCTATCGACagcaagaaattgaaaaaacatcaCGTCAAAAGCGTATACGACAAAAATCATATCCCTGTATGCATTGTGattttgagacaaaaaaaaagaaatttctcgATGAACATACACGTGATGTACATCCAGAATTAATTCGTTCACATAAAAGTTGTCTCGATAAACGTGCTGTTGCCAAGGCAAAAATGGAGGCAAacggtaaaatttattatcattgtcATGAATGTGGAAAAAATCTCTATTCACCATATACATTCTCATGGCATCAACGTATTCACACTGGTGAACGTCCATTCACATGTCATTTATGTGGTAAACAATTTCGCGTTAATCAAGGATTAGCACGTCATTTACGTGAGACACATGcacgtattaaaaaatttccctgcGATATTTGTGGTACAATGTTTACAACAAAACGTAATGTTGACGATCATCGTCGTATTCATACGGGTGAACGTCCATATGTTTGTAATATTTGTGGTAAagcatttaaacaaaaagcaTCATTATTTGTTCACAATCGTACACATTCGGATCAATTTCCCTTTAAATGTTCACATTGTGGACAGGGTTTTCGCACTAAAACACCATTACAAGTTCATATAACAAAACACACTGGCGAAAAACCATATGCTTGCGATATTTGTCAACGTAATTTtcgtataaaatttgaattaaaacgaCATCGTCTCGTTCATTTTGATGAGAAACCATGGCAATGTCAAGAGTGTCATCAATCATTTCGACAAAAGCGCTATCTTGTCAAACATCAGAAAATGAATCAtaagattatttttccaaatttttcgtAA
Protein Sequence: MDESSERISELSIINNSEFIIENEYFCEHCRESFADKLQLIKHLALCYRQQEIEKTSRQKRIRQKSYPCMHCDFETKKKKFLDEHTRDVHPELIRSHKSCLDKRAVAKAKMEANGKIYYHCHECGKNLYSPYTFSWHQRIHTGERPFTCHLCGKQFRVNQGLARHLRETHARIKKFPCDICGTMFTTKRNVDDHRRIHTGERPYVCNICGKAFKQKASLFVHNRTHSDQFPFKCSHCGQGFRTKTPLQVHITKHTGEKPYACDICQRNFRIKFELKRHRLVHFDEKPWQCQECHQSFRQKRYLVKHQKMNHKIIFPNFS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00882406; iTF_00880693; iTF_00883256; iTF_00881498;
90% Identity: iTF_00881498;
80% Identity: -