Lbou008670.1
Basic Information
- Insect
- Leptopilina boulardi
- Gene Symbol
- ZNF341
- Assembly
- GCA_011634795.1
- Location
- PHTE01000969.1:42107-48992[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.077 8.3 7.5 4.1 1 23 45 67 45 67 0.97 2 13 0.00046 0.049 14.5 3.9 1 23 225 247 225 247 0.99 3 13 9.5e-08 1e-05 26.1 0.8 1 23 253 275 253 275 0.98 4 13 0.0016 0.17 12.8 1.2 1 23 300 323 300 323 0.96 5 13 0.13 14 6.8 0.3 1 23 329 353 329 353 0.97 6 13 1.6e-06 0.00018 22.2 1.6 1 23 358 380 358 380 0.98 7 13 0.00046 0.049 14.5 4.4 1 23 392 416 392 416 0.92 8 13 2e-06 0.00021 22.0 2.5 1 23 418 440 418 440 0.98 9 13 2.2e-06 0.00024 21.8 0.4 1 23 446 468 446 468 0.97 10 13 7.5e-06 0.00081 20.1 1.8 1 23 474 496 474 496 0.98 11 13 0.0018 0.19 12.7 0.3 2 23 503 529 502 529 0.90 12 13 0.7 75 4.5 6.5 1 23 535 558 535 558 0.79 13 13 0.0044 0.47 11.4 0.4 2 19 561 578 560 581 0.93
Sequence Information
- Coding Sequence
- ATGGCCAATTCTATTTTTGATGCACTAACAGGTGTTTGCCTGGATAATTCCACAGTACAATCTTTATTAGAATCTCAAACTCTTATCACTCAAGTTGAACAATCAGtAATCGATCAAGATGACGAGGATATATTTCAGTGTGGCAAGTGTAAATGTCAATTTACatcattgcaattgtttatattacaTAAACAGGAACATTTCAAAGTACAAGAGCAATCGGTAGATATTAGTCAATATTTAGTAACAAACACTTCACAAATTGTATCAACGGAAGAACCATGTTCCGATGGAACGCAATATCAGGAGTCATTTGATCAAACAGATCAACTTGATGAACCAATTATTCTTGAGGGCAACGACATGTTGTTCAgcaTGGATCAAGAGGGCTCGAGTTATTTACCATCTGATTCTGGATTTAATgttccaattattttaaacactgAGAGTATAGATTCATTTGGAAATCCATCAGTTAATTCAGACACTGAGTCTATAAGTGTGAAAGTGCATAATATACAGTCATTGgaagataaaaattgtcaaaatgaagattttacaacttcaaatatttatcataattttacagatgaaataaacattattaatcCAAATGATAAGGAGAAAAAACATTCATCTGAGCAAGAAAATCAACCAACACAAAATCTAAAGtaCAAATGCGATTTTTGTGAAAagcaattttccaaaaaattttattggcaACAACATGAGCGTTCACACACCGGTGAAAAACCATATCAATGTGTTGTTTGTGGTCGTTCCTTTGCACAGAAATCTAATGTTAAGAAACACATGTCTTCGCACAAAGTGTGGCCTGGCACGGCTATACATTCCCTTCCACCtgaagctCCAACCGACGGCAGTATTGACAAGACTTATCATTGTCAATTTTGTAAGGAGATATTCGATTCGTACAAAGCATTAAAGGCGCATTTAATAGTTTCACATTTGACATTGAAAGTATACAAATGTGTACAGCTTGGATGTAGTTTAATGTTTCAAGAATTAGATGATTTTTTAGAACACACACGCAGCCATAAACGTTCAGAATATCGATGTCATGTGTGCGgtaaagtttttaatacaCTATCTGATTTGGGTAGTCATCAATATAGTCACACCGTCCGTAAACAAAAAACAACagagaaatattattgttgttcAATTTGTAAATCATCATTTTCCAATTTGGAATCATTAAATCATCATATGGAAACAACAACGCACGATTATGCATGTCCACATTGTGGAAAGAGTTTTTATGTTGAGAGATTTTTGAGACGTCATTTAAAAACACATGCCGCGCAATCACGTTTCATTTGTGAAGACTGTGGAAAGGCTTTTAAGACTGAACAGTATTTGACGAATCATAAACTTATTCACAATGATGAAACACCTTATATTTGTTcgtattGTCCATCGAAATTCAAAAGGAAAGATCGACTCCGTCGTCATATGTTAATACatgatttaacaaaaagatTAAAGTGTCCCTATCGAAATTACGTTGGCTGCATGAGGGAATTTTCTCGtcctgataaattaaaaaggcaTGTACTTACGCACAGcgatattaaaacatttagaTGTAATCtttgtgacaaaaattttcataggcCACAAGCACACAAACATCATGAACTCtataaacattgtttaaaatgtGAAGTCTGTTCATTGGAATTTAGAACGCCTGAACAACTTTTGAATCACAGTTGTGAGccaataattgaagaaaattcaaaaattgcaactaaaggaattaaaaatacaaaaacacgAAAAACAAtatctaaaagaaaatcaaattctaaaattgcacacaataaaactaaaaatcaaaaactagACGAATTGGAAGAGATCGAGGATTGTGatgataatataatgaataatttcgtGGAAATTAATGGTGATGGTGAAATATTAATAGACGAATCTTCGTgtaattcatttgaaaaagaaatggaaTTAACACCCGAAGATTCAGATTCCGAATTTAtagcttatttaaaaatgtccgTGAGAGAGGAActtgatacaaataattctCACGATGAAAGCAAATAG
- Protein Sequence
- MANSIFDALTGVCLDNSTVQSLLESQTLITQVEQSVIDQDDEDIFQCGKCKCQFTSLQLFILHKQEHFKVQEQSVDISQYLVTNTSQIVSTEEPCSDGTQYQESFDQTDQLDEPIILEGNDMLFSMDQEGSSYLPSDSGFNVPIILNTESIDSFGNPSVNSDTESISVKVHNIQSLEDKNCQNEDFTTSNIYHNFTDEINIINPNDKEKKHSSEQENQPTQNLKYKCDFCEKQFSKKFYWQQHERSHTGEKPYQCVVCGRSFAQKSNVKKHMSSHKVWPGTAIHSLPPEAPTDGSIDKTYHCQFCKEIFDSYKALKAHLIVSHLTLKVYKCVQLGCSLMFQELDDFLEHTRSHKRSEYRCHVCGKVFNTLSDLGSHQYSHTVRKQKTTEKYYCCSICKSSFSNLESLNHHMETTTHDYACPHCGKSFYVERFLRRHLKTHAAQSRFICEDCGKAFKTEQYLTNHKLIHNDETPYICSYCPSKFKRKDRLRRHMLIHDLTKRLKCPYRNYVGCMREFSRPDKLKRHVLTHSDIKTFRCNLCDKNFHRPQAHKHHELYKHCLKCEVCSLEFRTPEQLLNHSCEPIIEENSKIATKGIKNTKTRKTISKRKSNSKIAHNKTKNQKLDELEEIEDCDDNIMNNFVEINGDGEILIDESSCNSFEKEMELTPEDSDSEFIAYLKMSVREELDTNNSHDESK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00882400;
- 90% Identity
- iTF_00882400;
- 80% Identity
- -