Lbou015306.1
Basic Information
- Insect
- Leptopilina boulardi
- Gene Symbol
- ZFX
- Assembly
- GCA_011634795.1
- Location
- PHTE01000168.1:161456-172447[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.69 75 4.5 0.1 3 23 12 32 11 32 0.96 2 15 0.35 37 5.4 1.5 1 23 784 807 784 807 0.97 3 15 2.1e-05 0.0022 18.7 0.6 2 23 888 910 887 910 0.97 4 15 0.0046 0.49 11.4 0.1 2 23 923 944 923 944 0.98 5 15 9.4e-05 0.01 16.7 1.9 2 23 947 968 946 968 0.96 6 15 0.011 1.2 10.1 0.3 1 23 974 996 974 996 0.95 7 15 2.2e-05 0.0024 18.6 4.5 2 23 1003 1024 1002 1025 0.95 8 15 0.3 32 5.7 3.7 5 23 1038 1056 1037 1056 0.97 9 15 2e-05 0.0021 18.8 1.5 3 23 1063 1084 1062 1084 0.97 10 15 0.0091 0.98 10.4 0.3 2 23 1100 1120 1099 1120 0.97 11 15 6e-05 0.0065 17.3 0.7 1 20 1126 1145 1126 1148 0.92 12 15 2.9e-05 0.0031 18.3 2.8 1 23 1156 1178 1156 1178 0.99 13 15 0.0021 0.23 12.4 3.2 1 23 1184 1206 1184 1206 0.97 14 15 3.8e-06 0.00041 21.1 3.9 1 23 1212 1234 1212 1234 0.99 15 15 0.00039 0.041 14.7 7.0 1 23 1240 1262 1240 1263 0.96
Sequence Information
- Coding Sequence
- atggattaCGGGAGCAGCATGGGGCCTGTAGCATGTCCAGTTTGTACCCTCTTTCTACGAGAGGGAATCAGTTTACAAAAACATTTAGATACACATCCAAAAGAGCAAGTGATTGAGGCTCTTATAAAAGCAAGTGCTTCCGTCCCAAATCAAATACAGGATTCACAAAATCAGATATCACCATTACCAAGTCAAATATCACCATTACCAAGTCAGATATCGCCATTACCAAATCAAATTACATCTCCGTCACCAGTAAATTCAGCCTCTCATGTATCGTCTCCGTCTCCTTATCCAGTGGGTCCTGTTTTTGAATGCCCATCAACATTAAATGCAGTACTCTCGCCTCCACAATTTTCATCGTTTAGTTATCAACAGTTTGTTAATAATGGAACTGTTATGATACCTCAATATGCGATGGCACCACAGAATAATCATATGATGCAAATGCTTTATTCTCCCTATGGCATGTATCATCAACAGCCAATTTCAACAATGCAAATGATTTCACCTGTTGCTCACAATGCAGCTGctgcagcagcagcagcagcagccgCCGCCGCCGCTGCAACCGCTACTGCTTCTTCATCCGATACAAATTCACCAATAAGATTTAAACCCACAAATGATACCGTTAAATTGAATTCTTCAACTGAAAAATCATACAATTGTCCTGAATCAAGACCTGTTATACCTGAAATTTTAGAGGATAATGAATTACTCTCAAATACTGAAATAGCTTCAAAAGATCAACAGGACAAATGTGATCGAACCAACAATCAAAGAGTCGAATATCGTGAACAACAAACACAAGCATCAAATGAAGAAGAACGCAATGACGAATCACCCACTGATGATGAAATTATGagagaaaataatacaaatttagaacaaaaagaaatagtaACACCTGAATTAATAATCGATGATAGTGTCATTGATGATAAAACATCTGATGATTCTGATGTTGAAGCAACTGATCCACTTGACAAACTTGAACCAGAAAAAcccgaagaagaagaagaagaagaggaagaagaagaagatgaggaggaggaagaagaagaagaagaagaggaggaGTCAAATAAAACATGGAAACCCGATCAAAGAAAATCGCCGGAAGTTGAACAATTGGAACACCTTTTGATAACAATTATAGAATCAGATTACAACGAtactaataatgaaaaaattccaatggATAGTGATGACAGTGATACATCatctgatttaaataaatcaacaaataatttaaatttaaatgaaaaaacttaTCACTATAAACATAGTTTGTCAGCGCCGTCGTctccaattttctttaaaaaatcacacaGAACACATTCACGTTTATCATTGAGAGCTGATTTTcgttcaaatgaaaatatatccACATATCCTCTTGGATTTGAAGCGACagctttagaaaattttgccgatagaaaaaatgaagaggATCCAGATGCTGATATGGAGGAAATTGCATCAACTGTTCTATTTAAAGAATGTCATGAGGACGAACCAATGAGATCATATTCACCATCATCAATTGGTAGCAATAATTCAATTCTTCGTGTGCGTACAGATCTTAATAATGCCACTCCTCTTTTATCGAATCTacatattgataattttcaacaattcgaCACATCAATAACAGATGATAATCTacctaaaaatattcaagaagaaaatttcaataatgaatTAGAATCTCCAAtagtggagaaaaaaataaaagatgagaaacgaaaggaaaataatcaaatggacaatattaatattgaaaatacatcattgttgacaaaaaatttagatgcAGATGAATCGACAAATTCAAAGACTgtggaatcaaataaaatagtctTTCAAAAGCCATCAACggaagtttttaatattaatgaagaCGCTCATAGTGGTCCTATGaatgtttttgaatttgatgGTTTACAAATATTGGTACCAAGCACATTTATAAGTGAACCATCTGATAAGGCCATTAGTGGTACAAGTCAACAATCATTGTCAAGCAGTGAAGGAGGAACTTGCAttgatgaagaaataaaaagtattaatatgCGAGCCGATGAAAGTATGCCACCAAGAGGGGAATTATCAGAACAAGAAAGCAATGAATGTACTGATCAATCCACATGGCAGATTTACATTGGCCAAGAAGCTTCACGTATGTCAACATCATATGATCTCATGGCACGTGAAACCTGGGAAGAATCAGAGGGTTCAGACAATGAAATTGGAGGATCACTTTTAGATTCTAGATCACTAGCCACTCATTTTACATCAAGTTTGTTTTTAGATCGTGATCGTAAGACGCCGACgcgtcgaatttttaaatgtgcatATTGCACAGAAGGTTTTGAATGTCCTAAAGAACGTCGAGTTCATATGACAACAATTCATAAAAATGCCGGTGCCAGTAACAGTCAAGAACCAATTCAACAAACGGAAATAAAGGACATTAAATTATTGGagggacgcatgaatatgtTTGAAGATATTTTCGTTGCTGGATTACATGTTCCACAAACATATCATCAACCATTGTTACATCAATTACAACCACCGCAACAACTTGATCAAGGACGTGTTGACACTGACATAAAAGTAGATAATTTAAGAGTTTCAAATGCAATTGAAATAACATGCAATATTTGTAACCAAAGTTTTTCCGGTGAAAAGTCATTGCAAATACATCAACGACGAATGCACATTAAAGATTCAGTTAAACGCGTTAGGGAAAAtgcaaaatgtcaaatttgtaatcaagAATTTCcctcagttattttatttaatgcacatttaaaaattcatccccTTGAATGTGGCCAGTGTGGtaagtatttttatagaaaacaaaatttcaaattacacGTAAAACGTCATCTTGGAATAAAACCATTCCCATGTACAGTTTGTGACAAagcatttttaacaaaacaaaaacttgATGAACACACAAATGGCCACACTGGCAATGCACCagttaaatgcaatttatgtAATGAAACATTTAGacgttattcaaatttaacgcAACACAAAAATCGTCATCATTTGCATGTGAAGAAAAAGTTAAAGGACTATATTTGTCATTGTGGGGAAATATTTCacactaaaaagaaattagcaTGGCATAAGGAGACACACGATGAAAAACCAAAAGCATGTACATACTGTAACGAAAGATTCATTCATATGGCAAGTTTAACTCGTCATATGAGACGCGCTCATAATCGAAGATTTGTTCCTGATGCTCAAAGAGAAAGTGAAAATGTTGAATGTCCAATATGTAAATGCATTTATTTACGATCATCATTAGCTGTACATATGAGAGTTCATAATGGAGAGCGACCCTATGAATGTCAAGTTTGTTCTAAAGCGTTTAGTACAAAATGGAATTTACAGCTGCATAAATGGACGCATGCAGCAAGAAGTACTAAACCATTTAAGTGCAATCAATGTAATGCTGCTTTTTATCGACATAGTGATTATACAGCACATATGAATTCTCACAGGAATGTTCGTCCATATACGTGCAATTACTGTGGGGCtcaatttattagaaaatacaaTTGCCTTAGGCATGTTAAAGAACACGAAGAAAATAAAGCTTATACATGTGATGTTTGTAACAAAACTTTTCATAGATCATATTACCTCAAAGAACATTTACGTGTGCATTCTGGTGCAAGACCATATTCCTGTCATATTTGTGGTAAATCAAGTAGCACTAAATCCAATCACAATAAGCATGTGAGAATTCATCATGCACGTGAACCTGTAAATACCGAAAATTAA
- Protein Sequence
- MDYGSSMGPVACPVCTLFLREGISLQKHLDTHPKEQVIEALIKASASVPNQIQDSQNQISPLPSQISPLPSQISPLPNQITSPSPVNSASHVSSPSPYPVGPVFECPSTLNAVLSPPQFSSFSYQQFVNNGTVMIPQYAMAPQNNHMMQMLYSPYGMYHQQPISTMQMISPVAHNAAAAAAAAAAAAAAATATASSSDTNSPIRFKPTNDTVKLNSSTEKSYNCPESRPVIPEILEDNELLSNTEIASKDQQDKCDRTNNQRVEYREQQTQASNEEERNDESPTDDEIMRENNTNLEQKEIVTPELIIDDSVIDDKTSDDSDVEATDPLDKLEPEKPEEEEEEEEEEEDEEEEEEEEEEEESNKTWKPDQRKSPEVEQLEHLLITIIESDYNDTNNEKIPMDSDDSDTSSDLNKSTNNLNLNEKTYHYKHSLSAPSSPIFFKKSHRTHSRLSLRADFRSNENISTYPLGFEATALENFADRKNEEDPDADMEEIASTVLFKECHEDEPMRSYSPSSIGSNNSILRVRTDLNNATPLLSNLHIDNFQQFDTSITDDNLPKNIQEENFNNELESPIVEKKIKDEKRKENNQMDNINIENTSLLTKNLDADESTNSKTVESNKIVFQKPSTEVFNINEDAHSGPMNVFEFDGLQILVPSTFISEPSDKAISGTSQQSLSSSEGGTCIDEEIKSINMRADESMPPRGELSEQESNECTDQSTWQIYIGQEASRMSTSYDLMARETWEESEGSDNEIGGSLLDSRSLATHFTSSLFLDRDRKTPTRRIFKCAYCTEGFECPKERRVHMTTIHKNAGASNSQEPIQQTEIKDIKLLEGRMNMFEDIFVAGLHVPQTYHQPLLHQLQPPQQLDQGRVDTDIKVDNLRVSNAIEITCNICNQSFSGEKSLQIHQRRMHIKDSVKRVRENAKCQICNQEFPSVILFNAHLKIHPLECGQCGKYFYRKQNFKLHVKRHLGIKPFPCTVCDKAFLTKQKLDEHTNGHTGNAPVKCNLCNETFRRYSNLTQHKNRHHLHVKKKLKDYICHCGEIFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNRRFVPDAQRESENVECPICKCIYLRSSLAVHMRVHNGERPYECQVCSKAFSTKWNLQLHKWTHAARSTKPFKCNQCNAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKAYTCDVCNKTFHRSYYLKEHLRVHSGARPYSCHICGKSSSTKSNHNKHVRIHHAREPVNTEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -