Lbou001182.1
Basic Information
- Insect
- Leptopilina boulardi
- Gene Symbol
- Zbtb41
- Assembly
- GCA_011634795.1
- Location
- PHTE01000164.1:7543-10476[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.046 4.9 8.2 0.3 2 23 151 173 150 173 0.92 2 15 0.0013 0.14 13.1 0.2 2 23 178 200 177 200 0.94 3 15 0.046 5 8.2 1.8 1 23 330 352 330 352 0.96 4 15 7.3 7.9e+02 1.3 1.5 3 23 359 380 357 380 0.92 5 15 0.0026 0.28 12.1 0.1 1 20 390 409 390 411 0.90 6 15 2.1e-05 0.0023 18.7 5.6 2 23 420 441 419 441 0.98 7 15 0.00073 0.079 13.9 0.6 1 23 454 476 454 476 0.98 8 15 3e-06 0.00032 21.4 1.0 1 23 484 507 484 507 0.98 9 15 4.5e-05 0.0048 17.7 2.6 1 23 513 535 513 535 0.94 10 15 0.0015 0.16 12.9 2.1 1 23 538 561 538 561 0.95 11 15 0.003 0.32 11.9 1.8 1 23 580 602 580 602 0.96 12 15 1.1e-05 0.0011 19.6 0.6 1 23 608 630 608 630 0.98 13 15 1.1e-06 0.00012 22.7 0.8 1 23 635 657 635 657 0.97 14 15 1e-05 0.0011 19.7 4.2 1 23 665 687 665 687 0.98 15 15 3.8e-05 0.0041 17.9 0.8 1 23 693 715 693 715 0.98
Sequence Information
- Coding Sequence
- ATGGATTATGTCCATAATTATTGTTTGCCTTATGGCTCCAGCCAAAGTCAACCAACAACAAaagAATTATCATATAGTAAAGTAgaggatataaaaaaagtttgtcgACTTTGTGGAGAAAATAGTGACACTTGTAcacctatttttgaaaataagttgtCAATTGCTGAGAAAATAAGCAGATGTCTACCAATAgtggttattgCCAATGATAATTTACCGTCACAAATATGTAAACGTTGtcttacatatttaaatatcagTTATAAATTGATTGTAAATTCTATCAgagttgatgaaaattttcgtaaGCAATTAAAGGACAATGAAGAAAAAGAGGAAGAGgagaattatcatttaaataaaaaacaatctaCAACAGtagcaaaaaatgaaattcatacagtgcctataaaaaaattgaaaaaatttgcattaaacGGTCCAGTGACTTGTGAATTTTGTGACTTGATATTCTCAAATGTTAGTGAATTTGATGatcattttgagaaaaatcatatattaGAATGGAAATGTAATTATTGTGATGGAAGTTATGAAACATCAGACGAATTAATTGAACACAAAACTAAATTACATTCgggtaatataataatttgtaaaacatGCGTTGACGATGAAGAAGCAAaggaaaaacaattaaatcaaatgaaaaaagaaatggatATATCTTCTGGTGAGGAAtgcgaagaaaaattttatattcccgctgaaaatatttcaacaaataatgacgaagaatttattttaccacaaaataatcaattaacaaCTAATCCTGAAGAAATTCCTGTTATTCACCAACAAATAtcgaaatcaaatattttaacaaagaataattttgaatcaaatgaaGAAACAGAAATATTATTACCTTCTACATCATTAACACCTGcaattttagataaatcacaattaaattcaaagaatGAAGGGAAAAAggcatcaaataaatttaaacccATATATCTTTGTGATATTTGTCATCTTCAATTGAAAgatcaaaaactttttgaattacatAAGAAAATTCATATACCAAAAACTATGATTTGTGTTCATTGTAAACATGAATCAGAAACAATTTACGatctttatttacataaaaaggGAGTTCACAGTTTATATTCCAGAGTTAATCTTAAATATGTTTGCGAAATGTGTGGgagatttttttccagttCTTGGGAATGGGATGTGCATAAAACAAGAAGATGCAGAAATCGTGATggaaataaatgcaaatattGCGAGGCTACATTTTCAACAAGTCACAAgcttaaaaaacatttaagaaaacataaACAAGAGATGTTAAGTGATCCAactgcaaaaattttcaaatgtgtCTCATGTCCGAAAATATTTGTCGACGAGGAATTTTATCAGAAGCACAGAAATgtCCACGATCCTGAATgttggaataattttaaatgtgagATATGCAGTCGATCTTTTCGAGATAATGTGAGATTAAGAGAACATATGAAATCAATTCATGAGGGTGTTAAACCACATGCTTGTGATATGTGTGGTAAATCTTTTCATCGTTTATCGAACATgAAAGCACATCGTGCATTACATTTTGGTCATAAATGTCCTCATTGCGagcaaaatttcgaaaaaatacgaCAATTGGTTAATCACATTCAGGAAGATCATGGTTTAGAGCCACCAGCAAATTTATTAACCAAAAAAGGCTACGTGACAGGAacttttgtttgtaaattttgtggAAGAACTTTATCAACTTATCAATCATTATTGGATCACGAACACATTCATACGGGAGAGAAACCATATCCTTGTGATATTTGCGATAAAAGTTTCAGaAGTTACACTGCACGTTGGTCGCATATGCAGAGACATAAAGAAGGCAATTTCATTTGTGAACAGTGCGGAAAGtctttcaattaCAAGCAGAATTTGATGACACATGTGCAAATTCATGTTTCAATGGAGGATAGAAAGCATCAGTGTCCAACTtgtaataaaagatttttacgaAAGGCTCATCTCAATGTACATATGCGAATTCATGAAGGAATTCGTCCCTATACGTGcgatatttgtaattttagctTCACGCAAATTGGTGACATGAGACGACATCGTGCACGCCATGGAAATGGAGAAGTAAAACGACAACCACGAACAAAAGTcgataatacaaaatatatttccgaATATAGCAATGAagatacaaattaa
- Protein Sequence
- MDYVHNYCLPYGSSQSQPTTKELSYSKVEDIKKVCRLCGENSDTCTPIFENKLSIAEKISRCLPIVVIANDNLPSQICKRCLTYLNISYKLIVNSIRVDENFRKQLKDNEEKEEEENYHLNKKQSTTVAKNEIHTVPIKKLKKFALNGPVTCEFCDLIFSNVSEFDDHFEKNHILEWKCNYCDGSYETSDELIEHKTKLHSGNIIICKTCVDDEEAKEKQLNQMKKEMDISSGEECEEKFYIPAENISTNNDEEFILPQNNQLTTNPEEIPVIHQQISKSNILTKNNFESNEETEILLPSTSLTPAILDKSQLNSKNEGKKASNKFKPIYLCDICHLQLKDQKLFELHKKIHIPKTMICVHCKHESETIYDLYLHKKGVHSLYSRVNLKYVCEMCGRFFSSSWEWDVHKTRRCRNRDGNKCKYCEATFSTSHKLKKHLRKHKQEMLSDPTAKIFKCVSCPKIFVDEEFYQKHRNVHDPECWNNFKCEICSRSFRDNVRLREHMKSIHEGVKPHACDMCGKSFHRLSNMKAHRALHFGHKCPHCEQNFEKIRQLVNHIQEDHGLEPPANLLTKKGYVTGTFVCKFCGRTLSTYQSLLDHEHIHTGEKPYPCDICDKSFRSYTARWSHMQRHKEGNFICEQCGKSFNYKQNLMTHVQIHVSMEDRKHQCPTCNKRFLRKAHLNVHMRIHEGIRPYTCDICNFSFTQIGDMRRHRARHGNGEVKRQPRTKVDNTKYISEYSNEDTN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00879925;
- 90% Identity
- iTF_00879925;
- 80% Identity
- iTF_00879925;