Lbou006344.1
Basic Information
- Insect
- Leptopilina boulardi
- Gene Symbol
- -
- Assembly
- GCA_011634795.1
- Location
- PHTE01000069.1:324855-337869[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 32 7.1e-06 0.00076 20.2 1.0 1 23 224 246 224 246 0.98 2 32 0.031 3.4 8.7 1.5 1 23 269 292 269 292 0.96 3 32 3.1e-05 0.0033 18.2 0.5 2 23 299 321 298 321 0.97 4 32 0.00015 0.016 16.0 0.8 1 21 341 361 341 362 0.95 5 32 0.2 22 6.2 2.1 2 23 459 480 458 480 0.96 6 32 0.15 16 6.6 0.1 1 23 486 509 486 509 0.94 7 32 0.00013 0.014 16.2 0.1 1 23 573 596 573 596 0.96 8 32 0.0091 0.98 10.4 0.4 1 23 602 625 602 625 0.96 9 32 0.14 15 6.7 1.5 1 23 638 660 638 660 0.97 10 32 4e-05 0.0043 17.8 0.9 3 23 704 725 703 725 0.96 11 32 0.51 55 4.9 0.1 1 23 758 781 758 781 0.93 12 32 0.28 30 5.7 0.8 2 23 788 811 787 811 0.94 13 32 3.5 3.8e+02 2.3 0.0 2 23 820 842 820 842 0.84 14 32 0.018 1.9 9.5 0.1 2 23 849 871 848 871 0.95 15 32 1.5e-05 0.0016 19.2 1.2 1 23 879 901 879 901 0.98 16 32 0.026 2.8 9.0 1.3 1 23 932 956 932 956 0.97 17 32 0.00024 0.026 15.4 3.3 1 23 959 982 959 982 0.97 18 32 0.031 3.3 8.8 0.5 2 23 989 1011 988 1011 0.95 19 32 0.0037 0.39 11.7 5.1 1 21 1038 1058 1038 1059 0.95 20 32 0.0031 0.33 11.9 1.8 2 23 1073 1094 1072 1095 0.93 21 32 0.33 35 5.5 2.7 1 23 1098 1120 1098 1121 0.95 22 32 0.012 1.3 10.0 1.6 2 23 1128 1151 1127 1151 0.93 23 32 3.5 3.7e+02 2.3 0.2 2 23 1159 1181 1159 1181 0.94 24 32 4.6 4.9e+02 1.9 0.0 2 23 1188 1210 1187 1210 0.87 25 32 0.26 28 5.9 2.7 2 23 1219 1241 1219 1241 0.96 26 32 0.33 36 5.5 0.9 2 23 1247 1269 1246 1269 0.93 27 32 1.9 2e+02 3.1 0.2 1 20 1365 1384 1365 1386 0.93 28 32 1.3 1.4e+02 3.6 1.2 1 20 1402 1421 1402 1423 0.94 29 32 0.36 39 5.4 1.9 2 23 1514 1536 1513 1536 0.94 30 32 0.4 43 5.2 0.3 2 23 1543 1565 1542 1565 0.94 31 32 0.19 21 6.3 1.8 1 23 1576 1598 1576 1598 0.97 32 32 0.01 1.1 10.3 0.4 3 20 1607 1624 1606 1626 0.95
Sequence Information
- Coding Sequence
- ATGGAGCAAAGAGAACGTTATGATGAATTATGCAGACTCTGTGCCTCCTACGATGCCGTCAAGATGGATCTTTTCGGCCAGGAAGGCAAAAATCGTCAACTAATTGACAAAATACAAGCCTGCCTACCGTTTAAGatAGCAGAGAATGATCGCCTACCAAAGTGTCTTTGCTATCGTTGCATgtacaatttagaaaatttttacgacTTCAGGACAGCGTGTGTGAATGCAGTTGCACTTTTAGAAAGGTGTCTACCTCATGATAAAGATagAAATGATGAGAATCGAAGAAATCCACCGGAACATTATTCAGAATTACGAACTGAACttcttaaagaaaaacaacatATGCCAATACTTATTCCAGAAGCCCCCGTAGTTAATCCAAATGCAGCGTTGGGAACACCACCGAGACTCAATTCTGATGGCGAAGCTGATAATGACGATGAAGAAATTTTGGAACAAAGTGGTACAGAAGaagGAGTTGACGATGCAGAGGACAGAAAATCAGAGGAATACGAAATGGATATGGAAATGAATCCAAGtgattttttggaaatgaCACCAATGGTTACAGAGGATATTGAAGATAATATAAGAGGTGGAATTGTATCAACGCGAACGCAAAATGCAAGACCATTGCATCATAAATCAGAGCAACATGAAGTTTATGTTTGTTCACTTTGTAACAAGGCATTCAGCTCAAAAGGTCATTTGTCGCTTCACGCACGAATACATGTTGGCGCAGGTGATGTAATCGGTGAAAAAGTTATCACTGACGATCATACATCATACAAAAGGCCCTATCAATGTGACTTGTGTTATAAGGCTTATTCAACTGCAAAACATCGATGGGGTCATGTTTCAACGACGCACAGAGGACATCCTGCGGTAACATGTAGTTACTGTTCTCGCATTTATTCAACGAGAGGAAATCTAGAAGAACATATTAGATCAAGACACGCTGGTTTGCCACTTCCGCCGGAATTACCAGTTTCCTATGTACAACcggaaaataaatatcaatgtAAAACATGtccaaaaatgtatacaaataCAACGGATCTTAATAAACACAGTCGAATTTGTACTGGTGTTCAACAAAAGGAATtgccaaataatttaataatagaaaaattgaaaagaagtCACATTGTTGATACATCAGATATGTCAAGTAATGAATCAACTGATGAATCAAAGGAATATAAAAATGCCGAAGCAAAACTTGCAAAAAATCCACAACTCACAATTCTTAAACAGGCACTTACCAAAGGTgataatttaaagagaaattatgatgagaaatataaaattaattccaaatcgaagaaacaaaatgaaaatagtgaGACTGATGTACAAAAACGATGGTACTGTGAATCTtgttcacaaaattttaattctttggaAAGTTTTAAAGAACACGAACACACTCACGAAATGGAGAAACCATATTTTTGTCTATTATGCGAAAAGGACTTTGcgcaaaaatcaattttgggTAATCACATTGTTACAATTCATGGCGTTGATCCAAATCCAATTCTTGAGAGTGATCGATGTTTGAAAAAGTGGAATAAAAAACAGGACACGAATGGTAAGatgaatttaacaattaaaagagAAGAATCGCCGGATGCAATTTTGGAAAACGATGAAGAtgaacaacaacaacaaccggaaagtaataaaatgattgaaattgaAACAGTTTTTGTGTGTGAAATTTGCACTCGCGATTTTAATGATAGAGCATCATTGTGGCTTCATATTCGTGCAACGCATAAAGAATTTGCCGCATTTGCATGTggtgtttgtttaaaaatttgctctGACAATGCCCAATTATTAAATCATGTCAATATGTATCATGGTggttcaaaacttttaatgTCAGAACAAAGACGCTATAGTTGTACAATTTGTGGACGACAGCATGATTcgcgtaaaaaattaataacacatGTATCAATTCACAATGTTGATCCTAGCTATGATCCCGCGAGTTTTGTTCAATTGAATagcaattattataatgaaaatttaaatagcaaTGAAGGAAACGAACAAATTGATGGTGAAATTGAAGATAGTGAAAAAGTTGATTgctatatttgttataaatcaTTTCCAAATGAAGATCATCTTATAAGACATCAACGAAATGCTCATAAATCCGATCCAGCTGTTGCAATTGGTGAATCGGCATCAAATGGCAATGGTCCAGGTTcaaatggaaatggaaatagggcacaatatcatttattttttatttgtgaacTTTGTGGAAGTTCATATCCAAGTAAATGGGAACGTTGGCTACATGTCTCAAGTGTACATGGTAATGAGCCATCAATAAAATGTGAAAGAGAAGattgtgcaaaaatatttgcaactAAATCATTACGTAATGAACATGCTCAACATCATATGATTCAAGGTAGTTCGCCAAATACATGTGAAATATGTGGAAAATTATGGGGCAGTCGTGTTGATTATTGGAAGCATGTAATGGGCGTTCATTCCGATACTGTTCCATTAATTTGTGGTGTTTGTCTAAAAGTATTTCCAAATGTTATGCAATTAAGTTCACATGTTAAAACAAATCATTGGCCATTAACTAATGGTGATTTTAGTTGCGATATTTGTGGAAGGCCTTATtcgaataaatcaaaaatgtcaagacatagaaaaattcatggtCTCGATGGTGATGGTAATGCAAATCCTGATCCAAGTGAATATATGAATGATACAGGACGTTTTGATAATGGTGCAACGGAAGTTGATTTTAGTTGTGAAATGTGTGgagatttgaaatttatatcattGGAGGATCTTTGTAATCATCGAAGAATGACACATAGTTTATTTCCCTGTGATTTGTGTAATAAATGTTATGGACGAACGTCACATTTATGGAAGCATGTTAATCGAGTTCATAAAGGTCATAAGGATGTGACTTGTCgattttgtttgaaaacaaGCGCATCGAGGGATCATTTAGCGGCGcatattgcaaaaattcatCGATATGAACCGGAGGTGAAGAATAATGTGAGAGAATCAATGAATCATAAAGTCAATATTCCTGAGGatgaaattcttcatcattgtgaaaaatgtaataaaggatttcataaaagatatttattaCGACGTCATATGAAGGGTTGTCAGAATTATCGTAAAGATCCTGGAGCACTTTTGACACGATGTCGAGCTTGCGAGAGAATATTTAAAGACAGAGCAAGTCTTCAAAAACATATTGAGAATCATCATAGTAGTTATACTTGTCATTTGTGTAATGAAACAATCACATCAAAATTGGCAATAATGACACACAATCGTGTTCATCATATGAATCATCCAGATCTTACGTGTGATTAtactaattgtaaaaaattattccgtaCTAAAGAGGATCTTGAATCTCATAAAAAAGATCATCGATATCATACATCACCGaatgtttgtgatttttgtgGTGATAcagtggaaaataaattaaaattaaaaatgcacGTTTTGTCATTACATCGAAATGAAATTGGTGTTTCTTGTGGTGTTTGTTTAATTCCAATGAAAGATCCAAAAGATTTAAGAAAACATGTTGAGGATTCAcataaagaaattcttttgaaaccAAATACATGTCAAGTTTGCGGTAAACAATATGCATCAAAATGGAAAGCATTTgatcatacaaaaaaatgtcatggaaaagtttttaaaacttgtAAACAATGTTTGGCTGTATTTATCACTGAAGAGGATATGAAGAATCATTATGAGCATGTTCATAATGTGCCTAAGGATCAATTAGCAACTTATGAATATCGTTTGGAAATTGGACGCAAACGTCATTATGATTCATTGGAAATTGTGATGAAAGAAGAACCAGAGGAAATGGAATTATATGAAGAGCCTGTTGAAGATTATTCAATGGATTATAAGAGAAGAATATCTGAATCCGATTACGATTATGATGCACGAGCTTATTATTCCAACGAGCAGGATGAAATTCattcagcaaaaaaaatgaaatttgattctCGCGGTAAACATAAAATGAAGGATCACGTCAACTATGAATGTAGACCTTGTAATGTTCAATTTGAATCGAAGGAACATTTTTACGAACATATTGTTGTTTGTCGTAATCTTACAAttgaacagaaaataaatgatCAAGAATGTTATGTATGTAAATCATGTAATTCACAATTTGATTCAAAGGAATTATATCATGATCATCTTTTTGTTTGTCGTTGTCTGCCAATTGGTGAAGTTCCCAGTTTTTCGACATCAATTCTCGAAGctcatttaaagaataataatcaaattaaaaacgaaGAACATGATGATGtggataatttaaatactcCAGATTTCAATCTTTTTGAAGATATTAATATGCAATTATCAGGACAAAGGCCGGTGCAAAATTTATCGATAAAATCATCATCAAGTAGCAATAAATGTTCAAGAAAAGATTCAAGAAAAGTTTATGATGAATCAACAAACACTGAATGTACTTGTGAGGTTTGTGGAAAACAATGGCCAGCAAAGAAACATTTGTGGCAACATTTAATTCGTTTTCATCGAACGGAAGCTGCTGTTACTTGTGGTGTTTGTTTGAAATTGTGTAAGACCTATGAGGATTTAGCTGATCATTTAAAAGCTGCCCATCAAGCTTTATTATCATGTGAAGGAAATAATTTCACTTGTAAAATATGTGGAAGATATCATAATGCaagaagtaaattattattgcatatGAGCATTCATATCAATTGTAAGAATAATCCAATGTGCAACAAATGTAAACGCAGCTTTGAAACTGATGATAAATTGAAGGAACACATTGGAAATTGTGAGGGTAGACAATCAGGTTTGGGAGTTCGGCACGATGCAGCGAATAAGGATGAAAAAGTTGAGAATGATGAGAAAGGAAGCGAGGGAGAAGAAAAGGAGGCAGATTTTGGTTCTGAAGGTGAAGAGAAAGCTTCTGATAATGATGAAAGTAGTTCTGATGATTCGGATGATTCAGAAACGGATAGTTCATCAAGTTCGAGTGACGATGATGAGGATGAAGATGATAATGAGAATGAGgataatgaaaatgaagagAATGGAACTGCACCTGAATCAAGAACAACTAGTAGACTTGGAGAATTGAGTTGTACAAGTGATAGTGAAGATGAAGAGTCTGATAATTCGGATGattgtgaaaatgaaattaattcccGTGTAAAATCAGAAGAGGAAAAAGAAACAACAATTAAAGAACAAAAGGAAATAAGAAGAATTAAAACAGAATTGACATTATCGGAATCAGATACAAAGGATTCGAcagtttttggaaatttagaaatgaaacCAGAGAAAACAATGGATAGTATGGATTATTCTGATGATGAGGGACCACCAGTTTTGAGTCCTATGATGCCTTTATTGCCTTCGCAAGATGAAGATATGACTAGTCAGAttaatgaaatgaataaattaagtcCTATGGTAAATTTGGAAATGAAGATGGAgaatgatttgaaaaattcgaaaataaatttaactgaaGCTGATCCAACAGATTCTGAAAGtgatgatgaaaataaaatgtgtatCTATGAAGAAAGTGCACAACTTAAACAGGATATTTCGGGTACAAATACAGATGACGATGATGATCataatgaagaagaagaaggagaaGAAGGAGAGGAAGTAGAAGAGATGGATTTTCagaatgaaatgaatcaagaaatatttgaagatAAAGGAACACAAGATTCTATTGCAACGGAAGAAGAAAGTAATAATGAGAATGTCGAGGATGGAGGAGAAGAAGAGGAAGAGGGACAAGAAGCAGAGGAGGAGggtgaagaagaagaagaggaggaggaggaagctgcagaagaagaagaagatgatgAAGAAGAATTATATGAAGTTGGAAAGGAACAAATTGTAAATGATACAATTGAACAGTCAGAGATAATGTCCGacaattttgtagaaaattttgacGAAGTCGAGGAGGGAGTTATAATTGAAGGAGCAGAAGAACttcaaatggaaaataatgttgaaattGAAGGAGAATTAGACGACAATAATTCTCTCATTGAAGAAGAAATTATAggagaagaaaattatgaagATGAAACTAATATAGAAGATATTAACAATGAGGATCATTCCAtgcagaatttaaataaaactattttaactgTTGGTAAGGATCTTGAAGGTAATCCTATTTTAATTCGTGAAGTAGTAACTGAATATGTTTATCAAGATGATTTTGATGGTGAAACTGATTATGTACAAGTTCCACATGatcaaaatactttcttcaatgatgatgaagaagaagtagaggaagaagaacaagaagaagaagaagataatCAGAGAATGACCGATGGaacttttgatataaataatgatgatgatgatgatgatgataataatctTGATGACCAAAATATTATTGAGACAAATATTTTGACTGGTgaggaaatagaaaataatgagaagatagagaatgaaaaattagatgaaaataaaattgatgatggTGAATCGGAAGAGTCAAGAATGAGTGCCAAAAGTTAA
- Protein Sequence
- MEQRERYDELCRLCASYDAVKMDLFGQEGKNRQLIDKIQACLPFKIAENDRLPKCLCYRCMYNLENFYDFRTACVNAVALLERCLPHDKDRNDENRRNPPEHYSELRTELLKEKQHMPILIPEAPVVNPNAALGTPPRLNSDGEADNDDEEILEQSGTEEGVDDAEDRKSEEYEMDMEMNPSDFLEMTPMVTEDIEDNIRGGIVSTRTQNARPLHHKSEQHEVYVCSLCNKAFSSKGHLSLHARIHVGAGDVIGEKVITDDHTSYKRPYQCDLCYKAYSTAKHRWGHVSTTHRGHPAVTCSYCSRIYSTRGNLEEHIRSRHAGLPLPPELPVSYVQPENKYQCKTCPKMYTNTTDLNKHSRICTGVQQKELPNNLIIEKLKRSHIVDTSDMSSNESTDESKEYKNAEAKLAKNPQLTILKQALTKGDNLKRNYDEKYKINSKSKKQNENSETDVQKRWYCESCSQNFNSLESFKEHEHTHEMEKPYFCLLCEKDFAQKSILGNHIVTIHGVDPNPILESDRCLKKWNKKQDTNGKMNLTIKREESPDAILENDEDEQQQQPESNKMIEIETVFVCEICTRDFNDRASLWLHIRATHKEFAAFACGVCLKICSDNAQLLNHVNMYHGGSKLLMSEQRRYSCTICGRQHDSRKKLITHVSIHNVDPSYDPASFVQLNSNYYNENLNSNEGNEQIDGEIEDSEKVDCYICYKSFPNEDHLIRHQRNAHKSDPAVAIGESASNGNGPGSNGNGNRAQYHLFFICELCGSSYPSKWERWLHVSSVHGNEPSIKCEREDCAKIFATKSLRNEHAQHHMIQGSSPNTCEICGKLWGSRVDYWKHVMGVHSDTVPLICGVCLKVFPNVMQLSSHVKTNHWPLTNGDFSCDICGRPYSNKSKMSRHRKIHGLDGDGNANPDPSEYMNDTGRFDNGATEVDFSCEMCGDLKFISLEDLCNHRRMTHSLFPCDLCNKCYGRTSHLWKHVNRVHKGHKDVTCRFCLKTSASRDHLAAHIAKIHRYEPEVKNNVRESMNHKVNIPEDEILHHCEKCNKGFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSSYTCHLCNETITSKLAIMTHNRVHHMNHPDLTCDYTNCKKLFRTKEDLESHKKDHRYHTSPNVCDFCGDTVENKLKLKMHVLSLHRNEIGVSCGVCLIPMKDPKDLRKHVEDSHKEILLKPNTCQVCGKQYASKWKAFDHTKKCHGKVFKTCKQCLAVFITEEDMKNHYEHVHNVPKDQLATYEYRLEIGRKRHYDSLEIVMKEEPEEMELYEEPVEDYSMDYKRRISESDYDYDARAYYSNEQDEIHSAKKMKFDSRGKHKMKDHVNYECRPCNVQFESKEHFYEHIVVCRNLTIEQKINDQECYVCKSCNSQFDSKELYHDHLFVCRCLPIGEVPSFSTSILEAHLKNNNQIKNEEHDDVDNLNTPDFNLFEDINMQLSGQRPVQNLSIKSSSSSNKCSRKDSRKVYDESTNTECTCEVCGKQWPAKKHLWQHLIRFHRTEAAVTCGVCLKLCKTYEDLADHLKAAHQALLSCEGNNFTCKICGRYHNARSKLLLHMSIHINCKNNPMCNKCKRSFETDDKLKEHIGNCEGRQSGLGVRHDAANKDEKVENDEKGSEGEEKEADFGSEGEEKASDNDESSSDDSDDSETDSSSSSSDDDEDEDDNENEDNENEENGTAPESRTTSRLGELSCTSDSEDEESDNSDDCENEINSRVKSEEEKETTIKEQKEIRRIKTELTLSESDTKDSTVFGNLEMKPEKTMDSMDYSDDEGPPVLSPMMPLLPSQDEDMTSQINEMNKLSPMVNLEMKMENDLKNSKINLTEADPTDSESDDENKMCIYEESAQLKQDISGTNTDDDDDHNEEEEGEEGEEVEEMDFQNEMNQEIFEDKGTQDSIATEEESNNENVEDGGEEEEEGQEAEEEGEEEEEEEEEAAEEEEDDEEELYEVGKEQIVNDTIEQSEIMSDNFVENFDEVEEGVIIEGAEELQMENNVEIEGELDDNNSLIEEEIIGEENYEDETNIEDINNEDHSMQNLNKTILTVGKDLEGNPILIREVVTEYVYQDDFDGETDYVQVPHDQNTFFNDDEEEVEEEEQEEEEDNQRMTDGTFDINNDDDDDDDNNLDDQNIIETNILTGEEIENNEKIENEKLDENKIDDGESEESRMSAKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -