Basic Information

Insect: Leptopilina boulardi
Gene Symbol: -
Assembly: GCA_011634795.1
Location: PHTE01000008.1:362687-367626[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00053 0.057 14.3 0.2 1 23 256 278 256 278 0.95

2 12 0.0001 0.011 16.6 1.8 1 23 286 308 286 308 0.98

3 12 6.9e-06 0.00074 20.2 0.2 2 23 316 337 315 337 0.97

4 12 0.00033 0.036 14.9 1.3 5 23 346 364 344 364 0.97

5 12 0.00028 0.03 15.2 4.0 1 23 371 393 371 393 0.98

6 12 5.3e-06 0.00057 20.6 0.2 1 23 399 421 399 421 0.96

7 12 1.7e-05 0.0019 19.0 0.4 1 23 427 449 427 449 0.98

8 12 1.3e-07 1.4e-05 25.7 1.1 1 23 455 478 455 478 0.96

9 12 3.2e-06 0.00034 21.3 0.5 1 23 484 507 484 507 0.96

10 12 4.8e-06 0.00052 20.7 2.8 1 23 513 535 513 535 0.99

11 12 9.8e-05 0.011 16.6 0.4 1 23 541 563 541 563 0.94

12 12 0.00017 0.019 15.8 0.1 1 23 569 593 569 593 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00053	0.057	14.3	0.2	1	23	256	278	256	278	0.95
2	12	0.0001	0.011	16.6	1.8	1	23	286	308	286	308	0.98
3	12	6.9e-06	0.00074	20.2	0.2	2	23	316	337	315	337	0.97
4	12	0.00033	0.036	14.9	1.3	5	23	346	364	344	364	0.97
5	12	0.00028	0.03	15.2	4.0	1	23	371	393	371	393	0.98
6	12	5.3e-06	0.00057	20.6	0.2	1	23	399	421	399	421	0.96
7	12	1.7e-05	0.0019	19.0	0.4	1	23	427	449	427	449	0.98
8	12	1.3e-07	1.4e-05	25.7	1.1	1	23	455	478	455	478	0.96
9	12	3.2e-06	0.00034	21.3	0.5	1	23	484	507	484	507	0.96
10	12	4.8e-06	0.00052	20.7	2.8	1	23	513	535	513	535	0.99
11	12	9.8e-05	0.011	16.6	0.4	1	23	541	563	541	563	0.94
12	12	0.00017	0.019	15.8	0.1	1	23	569	593	569	593	0.94

Sequence Information

Coding Sequence: ATGACGACTGATACTGAAAAGTATTATTCTAATTGTTTTGTATGTAACAGTAAACTTTCAACAAGAAATactgttcaaatttttaatgaaaaatcagGATCGCGTTCTGAAAGACCTTTGGCAGAGACAGTATTTTCTGTATTGGAAATTGAGTTTGACTGCAATGATCCACACTCCAGTGTTATTTgtagaaaatgcaaaaaattgtttgaggaggttgATGCATTAGAAAGTCGTATATCTGAGATAAAATGTGACATATCTAACAGTTACAAGCAAACTCAAAAAGTTATATCTGAATCATTTCTAAATGAAGATGAACTTAATGATCATGATTATTTGAACGCATTGGAGGCACCCAGCAAAGAAAagatagaaatgaaaaagaatacaaatgtgaaaaaaaaaattgtggaatCTAAAAAGTTAACagaatttgaagaaataaatgaagataaagaggtTGATATAATGGAAGATGAAAAAGATTCATCGCCTGTTCAAAATGTTTCTGAActtgtaaattcaattaaagaaGGCGAAGAAGTGATTATTAAAGTTGAATCATTAGATTACTTAAAtaatgacttaaaaaaaactcttttaaaaCGAGGAAAAATTAACTCAAAAGAAGAACAATCACCAGAACAGaTTGTTTTACGAGAGGATTCAGTGTATACGTGTTTATTATGTTCTCGCAATGCAGTAAAAGGCGATGCAAAAAGCATTGTTGCTCACTTGAAAGCAGTACATGATACTCGATTGTATATATGTGATTTGTGTGgcttagaatttaaaaaacgaacaGATCTCTCAGTTCACCTTGATGATCATGTAGCAAAAGAAGAAGGAGATTTTCAGTGTGAAAATTGCaacagaatatttaataatttacgacTTTTTAGAATACATAAGCGAATTCATTACCCACAAACTAAGTCTTGGCCTTGTGAAATTTGTGGCAAACGATacagTTCAAGAAATTTGCTTGAAGAACACACTAATACACATAAAGGAGTTCGGCCATATATGTGTAAATGTGGAAAAGacttttcttcaaaatatacCTACAAAGCACACGTTAAAACACACGAATATCGTCCACGTCCTTTTGAATGCTCACATTGTAGCAAAACTTTTTTGAGTCAACAGAATCTTAGTCAACATGAAAGAACTCACAATGGAATTAAGGAATATGTGTGTGACCAATGTGgtaAAGCGTTTGGATCACAGCATAATTTAGAAGTACACAGTATAGTTCACACTGGATACAAACCATATAATTGTAGAACTTGTGGTAAAGCATTTGCTAGAAAAGCAGAAATAAGAGATCACGAAAGAACACATACTGGTGAAAAGCCATATCAGTGTGAATATTGTGGAGCAACTTtcagTCAAAGATCCAATCTTCAGTCCCACAAACGAGCAACTCATTATAATGATAAGAGATACAAGTGTGATGATTGTGGAAAAGGATTCAAACGTCGTAGACTTCTAGATTATCATATAAAAGCAGCTCATACAGGAGAACGTCCATATAAATGTGAAACTTGTACAGCAACATTTGTTTATCCTGAACACTTCAAAAAACATATGCGCATTCATACAGGAGAAAAGCCATTCTTGTGTgaaGTATGCGGTAAAGCTTTTAATAGCCGTGACAATCGAAATGCTCATCGTTTTATCCACAGTGATAAAAAACCTTATGAATGTTTAGTTTGTGGTACTGGCTTCATGAGGAAACCTTTGTTATATGCTCATATGCAAACACAAGGACATCTTAATGATACAATTGTTGTAAATCAACCAAGATTGACAACAGAAGATGATCAACTTATTACTGTCTCAGATGGCAATGTAGAATTGTTAATGGAAAACGCCGATGCAGAACAGcTTAGTGAAGCAGGATTATATGTAACTGATCTAAAGAACCACGTCATCATACATCAAGATGGTAATCAAATATACCATGAAGAAGGTGTACTAAATATCCCTACTGATGgtgatattaataatgatcAAGTTCAGCATCTTGTTGTGGATGGACAGTTGCTTGAGAATGAAGCACATACATCTAGAGAAGAGGATGATGAAGGTTtagaagatgaagaagaagaagatgatgAAGATGATGACGACGATGAGTTATATAGTTATCAAGAAGGAAATCATAAAGAAACTATACTTTTACCGGGAActtcaaattataaacaaattataggagacaataaaaattctgttagaTTGGTACAAATAAGGATTCCTACTTCTTCTGCTGGTGATGGAAGAAGTTGGTTAAATTTAGTACAAAGCACTTAG
Protein Sequence: MTTDTEKYYSNCFVCNSKLSTRNTVQIFNEKSGSRSERPLAETVFSVLEIEFDCNDPHSSVICRKCKKLFEEVDALESRISEIKCDISNSYKQTQKVISESFLNEDELNDHDYLNALEAPSKEKIEMKKNTNVKKKIVESKKLTEFEEINEDKEVDIMEDEKDSSPVQNVSELVNSIKEGEEVIIKVESLDYLNNDLKKTLLKRGKINSKEEQSPEQIVLREDSVYTCLLCSRNAVKGDAKSIVAHLKAVHDTRLYICDLCGLEFKKRTDLSVHLDDHVAKEEGDFQCENCNRIFNNLRLFRIHKRIHYPQTKSWPCEICGKRYSSRNLLEEHTNTHKGVRPYMCKCGKDFSSKYTYKAHVKTHEYRPRPFECSHCSKTFLSQQNLSQHERTHNGIKEYVCDQCGKAFGSQHNLEVHSIVHTGYKPYNCRTCGKAFARKAEIRDHERTHTGEKPYQCEYCGATFSQRSNLQSHKRATHYNDKRYKCDDCGKGFKRRRLLDYHIKAAHTGERPYKCETCTATFVYPEHFKKHMRIHTGEKPFLCEVCGKAFNSRDNRNAHRFIHSDKKPYECLVCGTGFMRKPLLYAHMQTQGHLNDTIVVNQPRLTTEDDQLITVSDGNVELLMENADAEQLSEAGLYVTDLKNHVIIHQDGNQIYHEEGVLNIPTDGDINNDQVQHLVVDGQLLENEAHTSREEDDEGLEDEEEEDDEDDDDDELYSYQEGNHKETILLPGTSNYKQIIGDNKNSVRLVQIRIPTSSAGDGRSWLNLVQST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01392960;
90% Identity: iTF_00882383;
80% Identity: -