Basic Information

Insect: Leptopilina boulardi
Gene Symbol: -
Assembly: GCA_011634795.1
Location: PHTE01000198.1:246632-254540[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00025 0.027 15.3 0.2 2 23 689 710 688 710 0.97

2 16 6.1e-05 0.0066 17.3 1.7 1 23 715 737 715 737 0.98

3 16 2.3e-05 0.0025 18.6 2.5 1 23 743 765 743 765 0.98

4 16 4.1e-05 0.0044 17.8 1.0 1 23 771 793 771 793 0.98

5 16 0.0026 0.28 12.1 5.2 2 23 800 821 799 821 0.98

6 16 0.013 1.4 9.9 3.2 4 23 833 852 833 852 0.96

7 16 0.0058 0.62 11.0 3.7 1 23 858 881 858 881 0.96

8 16 2.7e-06 0.00029 21.5 0.8 1 23 887 909 887 909 0.99

9 16 2.5e-05 0.0026 18.5 0.6 1 23 915 937 915 937 0.98

10 16 6.2e-06 0.00066 20.4 1.0 2 23 942 963 941 963 0.97

11 16 1.9e-06 0.00021 22.0 0.1 3 23 971 991 970 991 0.99

12 16 0.032 3.5 8.7 3.3 1 23 997 1019 997 1019 0.97

13 16 0.0016 0.17 12.8 6.0 1 23 1025 1047 1025 1047 0.99

14 16 0.0018 0.19 12.6 2.3 1 23 1053 1075 1053 1075 0.97

15 16 0.0094 1 10.4 1.3 2 23 1081 1102 1081 1102 0.98

16 16 0.006 0.64 11.0 0.6 1 21 1109 1129 1109 1130 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00025	0.027	15.3	0.2	2	23	689	710	688	710	0.97
2	16	6.1e-05	0.0066	17.3	1.7	1	23	715	737	715	737	0.98
3	16	2.3e-05	0.0025	18.6	2.5	1	23	743	765	743	765	0.98
4	16	4.1e-05	0.0044	17.8	1.0	1	23	771	793	771	793	0.98
5	16	0.0026	0.28	12.1	5.2	2	23	800	821	799	821	0.98
6	16	0.013	1.4	9.9	3.2	4	23	833	852	833	852	0.96
7	16	0.0058	0.62	11.0	3.7	1	23	858	881	858	881	0.96
8	16	2.7e-06	0.00029	21.5	0.8	1	23	887	909	887	909	0.99
9	16	2.5e-05	0.0026	18.5	0.6	1	23	915	937	915	937	0.98
10	16	6.2e-06	0.00066	20.4	1.0	2	23	942	963	941	963	0.97
11	16	1.9e-06	0.00021	22.0	0.1	3	23	971	991	970	991	0.99
12	16	0.032	3.5	8.7	3.3	1	23	997	1019	997	1019	0.97
13	16	0.0016	0.17	12.8	6.0	1	23	1025	1047	1025	1047	0.99
14	16	0.0018	0.19	12.6	2.3	1	23	1053	1075	1053	1075	0.97
15	16	0.0094	1	10.4	1.3	2	23	1081	1102	1081	1102	0.98
16	16	0.006	0.64	11.0	0.6	1	21	1109	1129	1109	1130	0.92

Sequence Information

Coding Sequence: ATGGAGGTGACATTAAAACGTCTAACTGCTGATGGTAATTTTGCAAatgaagttttatttttaaatcagcaAAAATCGtatTCATTTGGACGAATGTCAAAAAATGATGTTGTCCTATTTGCACCAACAGTATCAAATCATCATTGTATTTTTCATCACAATTCAAATGGTTTCTTTGTTGAAGTATtggagAGTTGGGCGGGTGTTATTGTTAATGGGACAAAACATACAAATGGTTCGAcggttcatttaaaaaatgacgatGTCATCTCAATTGGacctttatttaaatacaaaattgaaattaagCCACAAACTGTAAACAATGAAATTGAACCACATTTTACATCCGATTTTGAAACTGATTACGAAAGTATCAAAGAAGAAGATACAGAAAATGAGGACACAGATTGTGAAGAAGctcaaaATTTCGAGTTGGAAACATCGGATGAAATAAAAAGGGAATTAAACGAAAGCGAAAGAGAGGAAATTACATCGCAACAAATTCATTCAGCAATGGAAATATCATTTGAAGAAGATGAAGATAAACCATTGTTAATGAATTTAACGGTTGACAATTTAttgcaatcaaaaattatcgacGACAATAAtgattctttgaaaaaaggagaaaattccaatttagagaaaaaaatctcaCAATCCATTAATCGTCGACGTGTgtcaaaggaaaaattatcatcaacaaaaaacaaatttttcaataatttgaaaaataataaaatttcatcaccaaatacagagaaaaatgaaatttccaaagaaacaaaaatttcccaagaaaatgaaattactgaaataaatgaaagtgccaaagaaaatcaaattttcgaaaaaaacaatgaaacttctacaaatgaaaatgaaattttcccaAATAATGACGAATTAACAATTCATGAAAatcaaataccaaaaaaaatcccacaaaatcaaattccatccatagataaaaatttacaagaaaaaccaaaaacaaataataaaaataaaaattccccaacaacaaaaaatgaatcgaataaagaaaataattttcaattacaagaAAATCTCGAAAATTCACCggaaaattccaataaaacaTCATTTCAACCATTTATAAATCTCGAacgttataatttaaaaaataaaaatgaatcccctttaaaaaaattaaaagcgcGTACAAAACGTAAAAAAGACTTATTACAACAACAAAGTATTCGTAAATGGGTGAGAAATCcatttgcacaaaaaaaaattaattttcgtgaAGTTAAAATTGTTCTCGAACGTTTAACAATTGACACGCAAAATTTGTCCTCCATTGAAATGGGGGGAAAAAATACACCACCGCCGACAGTaaagaaagatgaaaaattggaaaattcccCTAAAatcgaattgaaaaaaactaaagaagaaatagtggaatcagaaaaattcatagaaaaaagagaaaaaaaagagaaaaattttaatagaaaaaaaataaaagaagtgaaaaatttgaatataaattttgaaaaaaacaaaaaaattgaattaaaaaagaaaggagaaaaattggagaaaaataaaaataatttgaatttattggaaaaacaACTTCGTGTTTCGTTAACGGATATAATGAAAGATTTAACTTCAATGAAAATATCTCcttcgaataataataataatttatcgcaAACAATTAATATCTCGTCATTTGATACATTTCTTTCggataatttaacaaaaaaattatcatctacaaaaaaaatttctccaatGAAGAAACATTCCtctttgacaataaaaaaattgcaaaatcaaattccaacgagaaataatttattaacgaaATATTTTCCCGTCTCGCCGTTAAAGAAACTTCCTACCTTATCTTctgatggtaaaaaaaatggtaacgataatgatgatgatgatgatgatgatgatgatgataatgataaagATTATGATTATAATGAAGATAATGATACTGataatgatagtgaaaatagTAATGTAAATGCTGAAccaaaagtaattgaaaaaacccCATCAGGAAGATTAAAATGTCCAAAATGTCCAAAATCATCAATAGGTCCAAGACAATATGAACGACATTTATTAACACATGaagaaaaacgttttaaatgttcatattgtgataaaaaaattgcaagtaAATCATATTTACAGGAACATGAAAAATCACATCGCAATGAACGTccatttaaatgtaaaaaatgtaataaaagttATGTGGTAGAacgtaatttaaaatcacatcAATTGTCACATTTAAAAGAACGTAAATTTATATGTGATATTTGTAAACATACATTTAGATCAAAAAAAGACATTGCCGCACATATAAGAATACATTTGGGcactaaaaaaatgcaatgtaaaatatgtaaaaaaatattggcacACAAACATTCTTATCAATATCATATGCAAAcacataataataaagaaaaaacagttgcatgtatatataaggattgtaaaaaattatttacccgACAAATTAATATGAAACATCATCTTAAATCACATGAAAATCTTAAGGAATTTAAATGTTCATATTGTgagaattgttataattatcgTAGTGCACTTGATCGACATGTTAAATTAACTCATACATTTGTGGGAATTTATCAATGTAATtattgtgataaaaaatttccctctAAGTCAATTTTGGAGATACATTTGAGAATGCATACTGGAGAACGACCATTTCCTTGTCaggtatGCGATAAAAAGCTGAGAGACGAAAAAACATTACAAGTACACATGAAatcgcataaaaaaaaattgacctgCAACGAATGCAATGAAATGTTTACtggtaaattttcattgagacGTCATTTAAGAAtacattttccaaaagaaaaaaatttatgtcccTATTGTCAATGGGAATTTAAAAAGCCATCGGcattaattaatcatatacGCACACATACTGGTGAAAAACCATTTCATTGTGatatttgtgataaaaaatatgcaaTTAAAGGTGATCTTACATGTCACATGTATATGCATACTGGTAATTATccatataaatgtaaaaaatgtcaCAAGGGCTATGAAAAGGAAAGACTACTTAAAATGCATTATCGTAAACATACTGGTAAAATgccatttaattgtttattatgtcaattttcatttagataTAAAGCATCATTGACAATTCATTATTCAAAACATTTATCAAATGTAAGAAAATgtgatatttgtaaattagattttcgtgctaaaataacatttaatcgtcatttaaaattacataaacaaTTAAAGGGCATCTATAATTGTACTGTttgtgaaaagaaatttaaattacaaaatgatcTTGTTGAACATTCGAAGAAAATGATTGAAAGACTCGGTAAATGTTCAagtaaatga
Protein Sequence: MEVTLKRLTADGNFANEVLFLNQQKSYSFGRMSKNDVVLFAPTVSNHHCIFHHNSNGFFVEVLESWAGVIVNGTKHTNGSTVHLKNDDVISIGPLFKYKIEIKPQTVNNEIEPHFTSDFETDYESIKEEDTENEDTDCEEAQNFELETSDEIKRELNESEREEITSQQIHSAMEISFEEDEDKPLLMNLTVDNLLQSKIIDDNNDSLKKGENSNLEKKISQSINRRRVSKEKLSSTKNKFFNNLKNNKISSPNTEKNEISKETKISQENEITEINESAKENQIFEKNNETSTNENEIFPNNDELTIHENQIPKKIPQNQIPSIDKNLQEKPKTNNKNKNSPTTKNESNKENNFQLQENLENSPENSNKTSFQPFINLERYNLKNKNESPLKKLKARTKRKKDLLQQQSIRKWVRNPFAQKKINFREVKIVLERLTIDTQNLSSIEMGGKNTPPPTVKKDEKLENSPKIELKKTKEEIVESEKFIEKREKKEKNFNRKKIKEVKNLNINFEKNKKIELKKKGEKLEKNKNNLNLLEKQLRVSLTDIMKDLTSMKISPSNNNNNLSQTINISSFDTFLSDNLTKKLSSTKKISPMKKHSSLTIKKLQNQIPTRNNLLTKYFPVSPLKKLPTLSSDGKKNGNDNDDDDDDDDDDNDKDYDYNEDNDTDNDSENSNVNAEPKVIEKTPSGRLKCPKCPKSSIGPRQYERHLLTHEEKRFKCSYCDKKIASKSYLQEHEKSHRNERPFKCKKCNKSYVVERNLKSHQLSHLKERKFICDICKHTFRSKKDIAAHIRIHLGTKKMQCKICKKILAHKHSYQYHMQTHNNKEKTVACIYKDCKKLFTRQINMKHHLKSHENLKEFKCSYCENCYNYRSALDRHVKLTHTFVGIYQCNYCDKKFPSKSILEIHLRMHTGERPFPCQVCDKKLRDEKTLQVHMKSHKKKLTCNECNEMFTGKFSLRRHLRIHFPKEKNLCPYCQWEFKKPSALINHIRTHTGEKPFHCDICDKKYAIKGDLTCHMYMHTGNYPYKCKKCHKGYEKERLLKMHYRKHTGKMPFNCLLCQFSFRYKASLTIHYSKHLSNVRKCDICKLDFRAKITFNRHLKLHKQLKGIYNCTVCEKKFKLQNDLVEHSKKMIERLGKCSSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -