Basic Information

Insect: Leptopilina boulardi
Gene Symbol: -
Assembly: GCA_011634795.1
Location: PHTE01000092.1:473895-483263[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.00013 0.013 16.3 2.2 1 23 432 454 432 454 0.96

2 18 1.8e-05 0.0019 19.0 1.9 1 20 460 479 460 482 0.94

3 18 2.9e-05 0.0031 18.3 0.7 1 23 488 510 488 510 0.98

4 18 7.1e-05 0.0077 17.1 4.4 1 21 516 536 516 538 0.95

5 18 2.2e-05 0.0024 18.7 4.6 1 23 544 566 544 566 0.99

6 18 2.2e-05 0.0024 18.7 5.3 1 23 572 594 572 594 0.97

7 18 8.4e-06 0.0009 20.0 7.1 1 23 600 622 600 622 0.97

8 18 8.2e-08 8.8e-06 26.3 2.7 1 23 628 650 628 650 0.98

9 18 6e-05 0.0065 17.3 6.7 1 23 656 678 656 678 0.97

10 18 1.9e-05 0.002 18.9 5.8 1 23 684 706 684 706 0.98

11 18 5e-07 5.3e-05 23.8 2.9 1 23 712 734 712 734 0.98

12 18 7.4e-06 0.00079 20.1 7.8 1 23 740 762 740 762 0.98

13 18 2.3e-05 0.0025 18.6 9.1 1 23 768 790 768 790 0.98

14 18 3.1e-05 0.0033 18.2 7.5 1 23 796 818 796 818 0.98

15 18 0.0015 0.16 12.9 8.8 1 21 824 844 824 846 0.94

16 18 1.1e-05 0.0012 19.6 0.4 1 23 852 874 852 874 0.98

17 18 0.027 2.9 9.0 4.5 1 23 884 906 884 906 0.98

18 18 4.3e-07 4.6e-05 24.0 1.3 1 23 912 934 912 934 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.00013	0.013	16.3	2.2	1	23	432	454	432	454	0.96
2	18	1.8e-05	0.0019	19.0	1.9	1	20	460	479	460	482	0.94
3	18	2.9e-05	0.0031	18.3	0.7	1	23	488	510	488	510	0.98
4	18	7.1e-05	0.0077	17.1	4.4	1	21	516	536	516	538	0.95
5	18	2.2e-05	0.0024	18.7	4.6	1	23	544	566	544	566	0.99
6	18	2.2e-05	0.0024	18.7	5.3	1	23	572	594	572	594	0.97
7	18	8.4e-06	0.0009	20.0	7.1	1	23	600	622	600	622	0.97
8	18	8.2e-08	8.8e-06	26.3	2.7	1	23	628	650	628	650	0.98
9	18	6e-05	0.0065	17.3	6.7	1	23	656	678	656	678	0.97
10	18	1.9e-05	0.002	18.9	5.8	1	23	684	706	684	706	0.98
11	18	5e-07	5.3e-05	23.8	2.9	1	23	712	734	712	734	0.98
12	18	7.4e-06	0.00079	20.1	7.8	1	23	740	762	740	762	0.98
13	18	2.3e-05	0.0025	18.6	9.1	1	23	768	790	768	790	0.98
14	18	3.1e-05	0.0033	18.2	7.5	1	23	796	818	796	818	0.98
15	18	0.0015	0.16	12.9	8.8	1	21	824	844	824	846	0.94
16	18	1.1e-05	0.0012	19.6	0.4	1	23	852	874	852	874	0.98
17	18	0.027	2.9	9.0	4.5	1	23	884	906	884	906	0.98
18	18	4.3e-07	4.6e-05	24.0	1.3	1	23	912	934	912	934	0.97

Sequence Information

Coding Sequence: ATGAATAGTGATCAACATTCGCTGCCAGCGACTACGCAGGCACAGCAAGAGGAAGTAAACACTGGTCAAAGTGGTCGTCCTTCGTATCCGGGTGGTTTGCCTGCAACAACCAGCCTTGGAAATGTAGGAAGTACACCGCATTCATCTGCGGACCTTCGTGTAGGTACAGCAGTAGCATTAGCTTCCTCGGTAGCTAAATATTGGGTCCTCACCAATCTATTCCCAGGACCAATACCTCAGGTCTCTGTTTATCACCATCCCCACCATAACGCCTCACATAGAGGTGGTGGAGGAGGAGGTGGCAGCGAAACTCCCTCAAAGGAGTCACCATCGGCTCTCAATCAAGAAATGGCATTGACAACAAGTTCTCATCATCAGAATACATCTTCACATCATCATCAATCTCCCGTTAGTACCAGCAGTCATCATAGTTCGTTGCAGTCAAATACCCAGATTCCTGTTTCTCTTCCCGGATTGAATTTGGATGGAAATCATATACCCACGAGCCATTTACAAGCAGCGCACGCTCAAATGCAACAACAGATGCAATctcaacaacaacaaatgCATCAACAACAGCAACAATCCCAACAGCAGCAGCAAACGCATCATCAAATGCAAAATCATCAAAATGCCCAAAATAATGTACAAGCAGTCCAAAATCAGAATTCCCAAAGAGACGATAAAGTGAAAGATGAAAATGGAAGTTGTACAACCGAAAGATGTAGTGACAATCAAGTTCATTGTCAAGTTCAATGTGATCTTCAATTACAAGCACCACAAGATTTACAACAAAGTCTAATGCAACAACATATTGGTGTTAATATAACTGGTAATTCAGGTGATAATGGAAATCCAAATAATTCCgagaaatcagaaaaaaaggaagataTGAGACAAATTAACATGGCACaattTCAAGTTCCGGATTTAAAACCCGGCGGTCATATGATGGATGTAAGAACTGCCGATGGATCGGTCGTGAAAATCAGTGCTGGAAATGAACAAGATTTAGCTAAAAGTTTGGGTGTCGAAATGGtgcaaaatatgtataaaGTGAATGTAGAGGATATTAATCAGCTTTTAACGTATCATGAAATTTTCGGTAAGCTACAAAGTGAAATAGCTGCAGGAACAACATTAGTCGGTGGAACCGTACCCACACAAACAGTTACCACAATCCAAAATGGTGCACCAATAGTGCAACaagttcagttaaataaatttgacattaaaacCAGTGATGGAGAAGCAACGCCAGGACCAAGTGCATCTCCAGTTTCCGTTGGCAGTCATAATTGTGACGTTTGtggaaaaatattccaatttcgCTATCAGTTGATTGTACATCGAAGGTATCATACTGAAAGAAAACCATTTACATGCCAGgtGTGCGGAAAAGCTTTTTCCAATGCAAACGATTTGACTCGTCATGGTAAATGTCATTTGGGAGGATCAATGTTCACGTGCGCTGTATGCTTCCACGTTTTTGCTAATGCTCCATCTTTGGAACGCCATATGAAACGTCACGCAACAGATAAGCCATACAATTGTACAGTTTGTGGCAAAAGTTTCGCTCGAAAAGAACATCTTGACAATCATACTCGTTGCCATACTGGAGAAACGCCATATAGatgtCAATATTGCGCTAAAACATTCACACGCAAAGAACACATGGTGAATCATGTGCGCAAACACACTGGTGAAACTCCCCATCGTTGTGACATTTGCAAGAAAAGTTTTACGAGAAAAGAACATTTCATGAATCACGTGATGTGGCATACAGGAGAGACTCCACATCATTGCCAAGTTTGCGGTAAAAAATATACTCGCAAAGAACACTTGGCTAACCACATGCGCTCTCATACCAATGACACTCCCTTCCGATGCGAGATATGCGGTAAGTCGTTTACAAGGAAGGAACACTTTACGAATCACATTATGTGGCATACGGGCGAAACACCACATCGTTGTGACTTCTGTTCAAAAACATTCACACGAAAGGAACATCTTCTGAATCACGTTCGACAGCACACGGGTGAGTCTCCACATCGATGCGGCTTCTGCTCCAAATCGTTCACCAGAAAGGAACACCTTGTTAATCACATCCGCCAACACACAGgcGAGACACCCTTCCGTTGTCAATACTGTCCGAAAGCATTCACGCGCAAGGACCATCTGGTAAATCATGTTCGCCAACATACGGGTGAGTCACCGCACAAGTGTCAGTATTGCACCAAATCATTCACGCGGAAGGAACATTTGACAAATCACGTGCGTCAACATACAGGCGAATCACCACATCGATGCCACTTTTGCTCTAAATCCTTCACTCGTAAGGAGCATTTGACGAATCATGTACGCATTCATACCGGAGAATCACCACACAGATGTGAATTCTGTCAACGAACATTCACCAGGAAAGAGCATCTCAATAATCATCTTCGTCAGCATACCGGAGATTCATCTCACTGCTGCAACGTCTGCTCCAAGCCCTTCACACGAAAGGAACACCTTGTAAATCACATGCGTTGCCACACTGGTGAGCGTCCATTCGTTTGCACTGAATGTGGAAAGAGTTTCCCATTGAAGGGCAACTTATTGTTCCACATGCGATCGCACAATAAAGGAAGTAATGCCGAGAGACCGTTCCGTTGTGATCTATGTCCCAAGGATTTCATGTGCAAAGGACACTTGGTATCACATAGAAGATCACATTCTGATGAGCGACCACACAGTTGTCCTGATTGTGGTAAGACATTTGTCGAGAAAGGTAATATGCTTCGACATTTACGAAAACATGCCGCTGAAGGACCACCAACACAAGTAAGCACTCCCTCGGCTATTCCTCAACCTGGAGTATTGCCAATTCCAACAGCTGCTGCTGCTGTTCTTGTTGGGCATCCCCTTGCGCCACCGGCGCCTTCCGTTGTACCTCAACATACCGTTGTTGTACCCACTCCTCCCGGTGTACTTGCTTCTTACTAA
Protein Sequence: MNSDQHSLPATTQAQQEEVNTGQSGRPSYPGGLPATTSLGNVGSTPHSSADLRVGTAVALASSVAKYWVLTNLFPGPIPQVSVYHHPHHNASHRGGGGGGGSETPSKESPSALNQEMALTTSSHHQNTSSHHHQSPVSTSSHHSSLQSNTQIPVSLPGLNLDGNHIPTSHLQAAHAQMQQQMQSQQQQMHQQQQQSQQQQQTHHQMQNHQNAQNNVQAVQNQNSQRDDKVKDENGSCTTERCSDNQVHCQVQCDLQLQAPQDLQQSLMQQHIGVNITGNSGDNGNPNNSEKSEKKEDMRQINMAQFQVPDLKPGGHMMDVRTADGSVVKISAGNEQDLAKSLGVEMVQNMYKVNVEDINQLLTYHEIFGKLQSEIAAGTTLVGGTVPTQTVTTIQNGAPIVQQVQLNKFDIKTSDGEATPGPSASPVSVGSHNCDVCGKIFQFRYQLIVHRRYHTERKPFTCQVCGKAFSNANDLTRHGKCHLGGSMFTCAVCFHVFANAPSLERHMKRHATDKPYNCTVCGKSFARKEHLDNHTRCHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGFCSKSFTRKEHLVNHIRQHTGETPFRCQYCPKAFTRKDHLVNHVRQHTGESPHKCQYCTKSFTRKEHLTNHVRQHTGESPHRCHFCSKSFTRKEHLTNHVRIHTGESPHRCEFCQRTFTRKEHLNNHLRQHTGDSSHCCNVCSKPFTRKEHLVNHMRCHTGERPFVCTECGKSFPLKGNLLFHMRSHNKGSNAERPFRCDLCPKDFMCKGHLVSHRRSHSDERPHSCPDCGKTFVEKGNMLRHLRKHAAEGPPTQVSTPSAIPQPGVLPIPTAAAAVLVGHPLAPPAPSVVPQHTVVVPTPPGVLASY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00047431;
90% Identity: iTF_00200974;
80% Identity: -