Basic Information

Gene Symbol
Ncor2_1
Assembly
GCA_011634795.1
Location
PHTE01001126.1:68890-79749[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.5e-13 2.3e-10 40.8 0.5 2 46 180 224 179 224 0.97

Sequence Information

Coding Sequence
ATggatatatatgaaatttgtatatatggaTGTGATGGAAAAGTGAACAAACAATGTTTTGCCCCTCGTTATATGGAATCTGAATTTTTCAAGCaagTTGGAACAAGACAATTGGGAATACATACGTGCGCTGTTTGTCAAAGCACTGTCGAAGGTGGCAATCAAAGTCGACCATTGTCAAGGAGTCAAGCTTCACAATATGGAATCAAAGAAGAACAGGTATTACCTGGTGCTCGGGTGTGTAACACCTGCCGTTGTAAGGCTGTGCGAGGACGCTACGTCACGTGTCCTCTTCCTGGATGTCCAAATCTCAATAATGCCAACACCAAGAATCGTGTCAAACGACTTAGAGCGTTACCTGCCAAATGGCTTGATCTCCCACCTGAAATTCGCGATCCCGTCGTCAAGGAATTTCaGATACCTAATAATGCAACAAAATGTTGTTCGACTTGTTTCAATCGAATATCACGACGATTGGCGCCACATTTATCGGGTGGCGCTGATACAATTGATGAGGGTGGCGATTCATCAATGATTGGACAATGGAGCGACGAGGAACTTGAACAACTTCGTCGTGCTTTACGTGAACACGGTACAAATTGGCCAAAAGTCTCGGAACAAATTGCCGAAAAAACAAATCATCAAtgtaaaagttattatttcacCTATCGAAAGAAACATGGACTCGATCAAGTTGTTGCCGAATATTATCAATCTCTCGGCGAAGAAAGACGACCATGTCTCACTGACGAGGAGGAAAGTGGAAGCAGTACAAGTAGTTGCGACGAAATTgcggttCACGATACAAGTGACACGGCAAGTGCGGGAAGTCCAGCGAATACTATTTCAAGTACAACTCCAGTAGTGTCGGCTACATCGACTTCGACTGCACTTACGGTTACATTTTCTCAATCTGTGGATCAAAAAGTCGTTGATAAAGTGTCCGATATTTCGGTCGTTTCGTTAGGATCGTCATCATCGGCACAGCAATTACCCTGTACTGTTTCACTTCCCGCTCGTGAGGATTACGATAGTTCTGCCACGACGGCGGACGAAGGTCAGGGTGGTGCTGATTTGGAGAATAGTATTGTGTTAACGGTGTCAACATCGAGTTCTAATTCGTCAATGGCGCCTCATCAAACCtcacaacaacaacagcagcagcagcaaaGACAACAACAACCGCCGCCGAGTCATTCACCATCGACAACAAGCAATACAAATCCATTGACTGTCAAGGATCTCATGTTAGGTGTCATTGAAATGCAACTCAAGAGGAATCCCAATAGTCCAGCGAATACTGGCAGTTCCTCAGTGCCAATTAGTTCTGGTACACCGACAATATCAAGTATTCTCAATACGGATCATCGCAATGACATTACATTTGTTCGTGAATATAAGCATCAAACAAGTATGTCACAAGCGCCAACGCAAAATCGTGAATCCAATCTCGCCACATTATCTGTTGTCTCTAGTCCACATCATGGGCACAGATCAATTCCCAGTCCTCAACAAATTGGTCAAATGCAAGCGACCATAACACCCTGTCCACCATCGGTTCCAAGTAGTCAAACCCAATCCTCAGATCATTTACCAAAAGAGGGTCTTGTCGTGATGCAAGTACAACAAGTACAACAAACATTACGCGACACTGAGGGTACACTTGATTTAAGTATCAAAAAACCCCGTCAACAGGACTACAATCATTCGCTACAACCGCCTCAACATaaaccaccaccaccacctcAATCATCATCGTCCGTTGGTTCTCTCTATCGTTCCGAACCACCGCCAGGCGCCTACTATCATCCCCACACGCCATCCGACGTTGTTCAAAGTAATCGCGGTGCAAAAAGTCCCCTTGTCTATGTTTCATCGCCACGCTCCAATCAGGCGCCTCCTCTagctcaaaaaattaataaagtcgTCTCAGCGCCTCAACCACCACCGCCTCCACATCCAAAACTCTCACCAAAATTAACCAACATCAGTACAAGTCACAAGACAGGTTCAATAACGCACGGCACTCCAGTGCCTGGTGCAAGGTACGAGGGTCTCTTACGACAAATGACACCGCCCGGTAGTAATACAATGAATCCCAAGGAACCAAGTGGCGGCGGTTCAATAACCCAAGGAACGCCCGTTCATCCATTCGCTGTTGATAAACGCGGACAACAAATGTACGACTATCATCGTTCAATTCGTCATTCGCCAGTTTCAACGAGTAACGTTGTTCAAAGCGGCGGTCAAAATCCAAGCAGTGGCGTTGTTGTTTCCAATCAATATAATTCCTATTCAGCTCGACCACCACCAAGTTACAATACCGAACAACAATTATCATCGCGGCAAATAATTATCAACGATTACATCACAAGTCAACAAATGCACGGAAGAGGACGAGTGACAAACGCCGAGACACCGGTAAAAAGTGAACCACCCACCTCGGCATTGTATTACGCGAGTACACCACCACCACCGCCACAAACCCATACCCAACCACGTCAGGGTGTGATACAGAGGCACAACACACAAAAACCAATTCACTATCCACCGCCACCGGGTCTTGAGGCATTCTCATCCCTTGTCGATGTTGCCGTACAACAACCAAGCCTACCTGTACCGCATCCTCATCATTCAACGCCAACAAGTAGTTCCAGTGGTGGTGGTGGCGGCGGTGGCGCCGGTCACGAGGGCCTTGGCAAAACAATGGTCGATCGTCTCATGGCCGATCGTTACGTAACCGACAATCGTGCATTTCGCGAGCAAGAAATCCGTCTACAGGAGCATCGCATCGCCATGGAGCATCGTATGGCAGTTGCACATCATCAACAGCAAAAGGATCGTGAACGTGAACGTGATTTAGTTCATCTACGCGAAAAAGAGGAACAAAGAATCAAAGAAATGCGCGAGAAAGACTATTTAATGGAACATCGCATCGCTGTGCATCATCATCGCGAGAAAGAAATTCATCAAGATCAACATGTTTCGCATCGTCAAAAAGAAATGGACCATCGTCTTGtgcaaaaagaatttcaagatCATCGTCTCATTCAACAGCAACGGGAAAAAGAAATGCAACAACAAATTGCCGCACAACGAGAGAAGGAACATCAGGAGCATCATCGTTTGGCAGTGCAACGTGAAAAGGAATTACAACAGCAACAGGAACATCGTTTGGCGGTGCAGCATCAGAGGGAAAAGGAAATGCAACAACAGGCGGAACATCGAATTGCAGTGCAACAGCAGAGGGAAAGAGAACTTGCTCATTTGCAtcaacagcagcagcagcaacagcagcaacaacaacaacaacagcagcagcagcatcAACATCAGTTGCATCATATTCAACATCAACAGAGAATTGAGGCGGAGAGACGGCATATTGCGCAAATTTATCGTGAACAACATCCACATCTTGAGAGGGAAACTTCGAGAGTTATGAGTAGTGGTTTTTCACAATCGAGGCATCAACCAacgcaacaacaacaacaacagcagcaacaacaacagcagcaGCAACAGCCGTCGAGGCAAAATCAACAACAGCAACAACCgaatcaacaacaacaacaacaacagggCGATGGTTCGTCGACACTCACTGCCGCGAGTCTTATTGATGCTATTATTACACATCAAATTAATCAAAGTACGGATAATGCGCCTGGAACGCCGTCTTCGAATAATCAACAGAGACCCGGTGATAGACTCTTTCAGgGTTTCCAAAGAGACAGTCCTGCAGAACCAAATGGTGTTGCACACAGTCCTGCTAGCGATAATAATCCTGTAAATAGCGGATCAGTCACAGTAAGTGGAGGTGGTGttgttaacaaaaatgttactCTTGGCGAGCATATTGAACATATTGTCGCCAAAGATTATGGACCTCCACTGTCGTCTTACCGACCCTATTCAGGATATCAAACTTCCGAGGATCAATGGAAACGAAGAAAAGGATTGGACCCAGACACAGTGAAATCAGAGGATGAGCGACAAATAATTCGTGTCGCCcaacaacaacagcagcaacaacaacaacaacaacaatcgCAACAATCCTCACAATCAAGTCAATCCGTTGGTAAACAACAATTTCTTTCCGTTGAACCAGTTTCACCACCAGAAGCAACGACAAATCATTATGCTCGACGCTTCTATGAAACGACCACTGCCACAACGACTTCCGGTAACCCATCCAATAAGCACAGTCTCTCGCCACttgattatgtaaaaaataaaattgtcgaAGTAATGCGTACCTCAGAGGATGATAAAGGTGTTAATGTTGAACGTAATGGCGGCGGCGGAATTGgtggaggaggaggaggagtaGGCGCGAATGAtaaagatgataataataaaccaCGTGTTGAAAGTCCAGCCGGTATTGGTGGTACTAGTGAAATTGTCATTGATGATAATCTAAATcaacaacagcaacaacaacaacaacaacaacaacaaaatcaACCACCAGTACCAGCGCCAACGACATTTTATCCATTTAGTGCACTTGGCGTTCATACGGGTCCACCACCTGCGCCACCGCCACCTTCATCGGCAACTGCATCGTTGCCAAAATCTGAGCACATACAACCAGAACCAGCGCCACTTCTCTCCGCGCAATATGAGCCCCTCTCCGACGAGgattga
Protein Sequence
MDIYEICIYGCDGKVNKQCFAPRYMESEFFKQVGTRQLGIHTCAVCQSTVEGGNQSRPLSRSQASQYGIKEEQVLPGARVCNTCRCKAVRGRYVTCPLPGCPNLNNANTKNRVKRLRALPAKWLDLPPEIRDPVVKEFQIPNNATKCCSTCFNRISRRLAPHLSGGADTIDEGGDSSMIGQWSDEELEQLRRALREHGTNWPKVSEQIAEKTNHQCKSYYFTYRKKHGLDQVVAEYYQSLGEERRPCLTDEEESGSSTSSCDEIAVHDTSDTASAGSPANTISSTTPVVSATSTSTALTVTFSQSVDQKVVDKVSDISVVSLGSSSSAQQLPCTVSLPAREDYDSSATTADEGQGGADLENSIVLTVSTSSSNSSMAPHQTSQQQQQQQQRQQQPPPSHSPSTTSNTNPLTVKDLMLGVIEMQLKRNPNSPANTGSSSVPISSGTPTISSILNTDHRNDITFVREYKHQTSMSQAPTQNRESNLATLSVVSSPHHGHRSIPSPQQIGQMQATITPCPPSVPSSQTQSSDHLPKEGLVVMQVQQVQQTLRDTEGTLDLSIKKPRQQDYNHSLQPPQHKPPPPPQSSSSVGSLYRSEPPPGAYYHPHTPSDVVQSNRGAKSPLVYVSSPRSNQAPPLAQKINKVVSAPQPPPPPHPKLSPKLTNISTSHKTGSITHGTPVPGARYEGLLRQMTPPGSNTMNPKEPSGGGSITQGTPVHPFAVDKRGQQMYDYHRSIRHSPVSTSNVVQSGGQNPSSGVVVSNQYNSYSARPPPSYNTEQQLSSRQIIINDYITSQQMHGRGRVTNAETPVKSEPPTSALYYASTPPPPPQTHTQPRQGVIQRHNTQKPIHYPPPPGLEAFSSLVDVAVQQPSLPVPHPHHSTPTSSSSGGGGGGGAGHEGLGKTMVDRLMADRYVTDNRAFREQEIRLQEHRIAMEHRMAVAHHQQQKDRERERDLVHLREKEEQRIKEMREKDYLMEHRIAVHHHREKEIHQDQHVSHRQKEMDHRLVQKEFQDHRLIQQQREKEMQQQIAAQREKEHQEHHRLAVQREKELQQQQEHRLAVQHQREKEMQQQAEHRIAVQQQRERELAHLHQQQQQQQQQQQQQQQQQHQHQLHHIQHQQRIEAERRHIAQIYREQHPHLERETSRVMSSGFSQSRHQPTQQQQQQQQQQQQQQQPSRQNQQQQQPNQQQQQQQGDGSSTLTAASLIDAIITHQINQSTDNAPGTPSSNNQQRPGDRLFQGFQRDSPAEPNGVAHSPASDNNPVNSGSVTVSGGGVVNKNVTLGEHIEHIVAKDYGPPLSSYRPYSGYQTSEDQWKRRKGLDPDTVKSEDERQIIRVAQQQQQQQQQQQQSQQSSQSSQSVGKQQFLSVEPVSPPEATTNHYARRFYETTTATTTSGNPSNKHSLSPLDYVKNKIVEVMRTSEDDKGVNVERNGGGGIGGGGGGVGANDKDDNNKPRVESPAGIGGTSEIVIDDNLNQQQQQQQQQQQQNQPPVPAPTTFYPFSALGVHTGPPPAPPPPSSATASLPKSEHIQPEPAPLLSAQYEPLSDED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00880385;
90% Identity
-
80% Identity
-