Lbou013984.1
Basic Information
- Insect
- Leptopilina boulardi
- Gene Symbol
- -
- Assembly
- GCA_011634795.1
- Location
- PHTE01000364.1:28681-29013[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.7e-09 7.3e-06 26.0 0.0 5 42 6 44 5 46 0.93 2 2 7.2 6e+03 -2.5 0.0 2 10 57 65 56 66 0.76
Sequence Information
- Coding Sequence
- ATgggaaaattagaattagaataTGCACTCGCAAAATTGAGAAAAGGTGGAAAATCAATGAGAGAGGTTGCAAGAGAATATCAAGTTCCATTTTCGACTTTGaaagacaaatttaaaaataaacatccTGATAAACATGTCCGTCCTTGTGAATTATCGACGATCGAAGAAACGACAATTGTTGAAGCTTTGAAAACTGCTGGATCTTGGGGATTTTCTTTAAGAGCTAATGACCTCTGCAACGTTGTACAAATGTAcctaattaaaacaaaacgtGAAAATCGCTTCAAGGATAATAGACCAGGTCGAGATATTATTGATTGGTATTATTGA
- Protein Sequence
- MGKLELEYALAKLRKGGKSMREVAREYQVPFSTLKDKFKNKHPDKHVRPCELSTIEETTIVEALKTAGSWGFSLRANDLCNVVQMYLIKTKRENRFKDNRPGRDIIDWYY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -