Lbou015409.1
Basic Information
- Insect
- Leptopilina boulardi
- Gene Symbol
- -
- Assembly
- GCA_011634795.1
- Location
- PHTE01001533.1:15273-16637[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-10 1.7e-07 31.2 0.0 5 39 1 35 1 38 0.91 2 2 0.99 8.2e+02 0.2 0.0 15 24 110 119 106 120 0.80
Sequence Information
- Coding Sequence
- ATGAGTGAAGCAATTCAAGCTTTTCAGGACGGACAAAGTCTGAGGGAAGCTGCGAATAACTATGGGATTCCAAAGAGTAcactttatttcaaattagcaAATGGATCGAATATTAAATGCAGAAAGGGTCCGTCAACTGTTTTAAGTGAAGAAGAGGAagcaaatatagaaaaatggattttagAATGCGGGGAGAGAGGTTTTCCAGTGACTAAAGAGAGGTTATTAGATTGTGTGCAATTATACGTAACAAATGCTGAGAAAGAAACTCCCTTTAAAGATAATCGTCCAGGTAAGCAATGGTATGGTGCTTTTATGCAGcgacataaaaatttgagtatTCGAAAAGCCCAAAACTTGACAACGTCGAGAGCAGCTGTTTCTGTCCAGGATCTCCTGCAATGGTTTGCTCGCGTAGAAAAGtatttgcaagaaaaaaatttattgtcgtTGCTTGCTGAAAGGATTTTTAACTTGGACAAGTCAGCTTTCAGGTTAGTGCCTCCAAATGATCctgttattgcaaaaaaaggtTCAAAAGCAGTTTATCAGATAGTTTCGGATAACGTAAAGGCTACTCTAACAGTCCTGTTTACTGCCAATGCGTCAGGACAACTTTTACCGCCACTGATGCTATTCGATTCCAAAAATGCtccaagtaaaaaaattttaaatagcatTCCGAATCACTGGAGTGTTGGAAACACCGACCAAGGATGGATGACAGCTGAGAGTTTCTATGGCTTCATTACGAATGTCTTTTATAAGTGGTTGATTGagaataattatgaatttccAGTCATACTGTATGTGGATGGACATTCATCTCACCTGTCTCTACCTTTAAGTCAATTTTGTCATGAAAAGCAAATTGAATTGATTGCATTATTCCCCAATGCCACTCACGTATTGCAGCCATTGGATGTGGCACTGTTTCATGTATTAAAAGATTCGTATAAAAAGACACTGACAAAATGGAGAGTCGAGAATAATGTTATCAACATGAAGAAGGCTATGTTTGCTCCAGTTTTACAACTAGCCTTGGAAAATTCAGACTACTCGGAATGTATCAAGAATGGTTTCAGAACCTGCGGTTTATTTCCTTTCGATCCCAAAGCAATTGATTACAACGttttaaataagaacaaaaagaaatcaagATCGCAATTGACCGAAAAACCTGAATATCTtcacgaaaatgaaaataaaaagtttttagagTTTTTTGAACGAAATGTGATTTCTAGTGATGTTTTAGAGGCTTTCAAGATGGATGAGTTGAAACAATCCTGGAGCGGAGACATTAAAAAACTAGAGCTTTTTGAAAGTTGGCGAAAAATGAAACGCCTCAGTggtaacaattaa
- Protein Sequence
- MSEAIQAFQDGQSLREAANNYGIPKSTLYFKLANGSNIKCRKGPSTVLSEEEEANIEKWILECGERGFPVTKERLLDCVQLYVTNAEKETPFKDNRPGKQWYGAFMQRHKNLSIRKAQNLTTSRAAVSVQDLLQWFARVEKYLQEKNLLSLLAERIFNLDKSAFRLVPPNDPVIAKKGSKAVYQIVSDNVKATLTVLFTANASGQLLPPLMLFDSKNAPSKKILNSIPNHWSVGNTDQGWMTAESFYGFITNVFYKWLIENNYEFPVILYVDGHSSHLSLPLSQFCHEKQIELIALFPNATHVLQPLDVALFHVLKDSYKKTLTKWRVENNVINMKKAMFAPVLQLALENSDYSECIKNGFRTCGLFPFDPKAIDYNVLNKNKKKSRSQLTEKPEYLHENENKKFLEFFERNVISSDVLEAFKMDELKQSWSGDIKKLELFESWRKMKRLSGNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -