Lbou002838.1
Basic Information
- Insect
- Leptopilina boulardi
- Gene Symbol
- -
- Assembly
- GCA_011634795.1
- Location
- PHTE01001084.1:66097-68615[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-11 1.3e-08 34.8 0.0 1 42 15 57 15 60 0.92 2 2 5.7 4.8e+03 -2.2 0.1 15 23 587 596 585 597 0.76
Sequence Information
- Coding Sequence
- atggTTAGAAAGTACAAACGAAAATCTAGTCGACAAAGTTGGTCTGAAGAAGATATGGTTGAGGCAGTACAATTAGTTTCAAACGAAAAAATGAGTTGTCGGAAAGCGGCAGAGCAACTCGGAGTTCCGAGGGCTACTTTAACcagaaaagtattaaaatgtCGTGAAACTAACGAAAATGTTTTCACAGTTTGCAAAAAAGgaCTAGGATTTTCGACCGTTTTTAATGCTGAGCAGGAAAATGATttatgcaaatatattttgctaATGGAAGAGAGAATGTATGGACTGACACCAGaggatattagaaaaattgcatttcaGCTCGCAGTAAGGTccgatttaaaaaacaattttaacaaagaaaaagagaTGGCTGGAGAAGACTGGTTTCAAAAGTTTATGAAAAGGCATCCTGATCTGTCCCTTAGAAAACCGGAAGCAACCTCCGCTGATCGAGCATCAGGATTTAATAAGCAAGAAGTGGAGAAGTTTTATGATTTGCTTGATGAAAATactcaaaaatacaatttaacaaGCAAGTCTATTTTCAATGTTGACGAGTTTGGGACGAGTGTTGTTCCTAAATGTGTGCCAAAAATTGTAGCTATGAAAGGAAAGCATCAGGTTTATTCTCGAAAATCAGCTGAAAGAGGAAAATTGGTCACCGCTGAAATATGCTATTCTGCTGATGGTAAATATATGCCGGTAATGCTAATTTTCCCCCGATCTCGAGATAAAGAAAGATATTCAGAAGGAAAACCAGAAGGTGCTTGGGCGGAATTCAATAAAAGCGGATGGCTCGAcactgaaatttttactaaatggtttaaacaatttataatcttCTCTCAGAGTACTAAGGAATCACCTGTGCTGCTTTTGTTGGATGGTCATGCTACCCACGTCAAAAATATTGAGGTTGTTGATCTTGCTCAAGAAAATGGGGTGATAATTCTCTGTTTGCCTCCTCATTGCACTCACAGACTGCAGCCGTTGGACGTTTCGTTTATCAAACCGTTGAGTACATTTTACGCGAAAGAGACATCAAAATGGTTAAGGATGCATCCAGGTCGAGTTGTTTCaatgttcgaaattttttctatctttGGGAAAGCTTTTGAGCAAGCTGCAACTATATCTACAGCTAAAAATGGTTTCGAAAAAACTGGAATTTGGCCGTTCAACAGAAACCTGTTCAACGATTCAGACTTTTCCGCTGTCCTAACTGAAAAAGAGGATAGTTTTTGCAGCAATGTGGAAAATGAAGAGAGAAGATCGTTTAGACAGTTTATAACAGAAGTGCAGAGTATTAATGACAGCGGGGTTCCTAATTCGCCAAAAAATAAGGAGGAACTCAGTGTCAGTTCTTCAACTGTCCAGCAACCAGATGAAACATTCGTCGAAGAACTTgttgacaaaattcaaaatgatctCAGAAATGATCATCTATTAAACGAACCGATTGCTGAAGACTTTGATTTGgagaaTATGTTGCAAGACTCAACTGATTGTGTGGATCTAACCTTACCAGTGACTGATGCTGAAAATATTCCATCTGTTCCTGTGAAAGTATTGAGCACTTTTGACTCAaacaaaaatgtcattttaccTAAAGGTGGCAAATCAGTCGTCAAACCCAAAGGTCGGAAAAAAGGATTTACGGCTGTAATATCTTCTCCAGAATACAGGGAAATTTTAATGTCAAGCAAATCGAAAGCTGAACCAAAACGTGCACCAAAGAGACGAAagatgaacaaagaaaatgttAGTCAATCTCAAGCTTCTGTTCAGAATGCAGTACAACTGCAAGTACCAATTCAGCTGATAGAGTGCATGCAACCGTTTCCCATTCTAACCCAGAATCCGAAGCCAATAATGCCAAATGATCGACCAGTGTCAGTTCCTTCACTTTCTTTTCAACCAGTGAGCACACAATTGTTGCCAGGCGAATCACTTGCAACAATTCGTCCagttaattttcaacaatcaAGAATAACGTATCCTACTTACCCTGGGGTAACTATTCGCCCTGTGAATGGGACAATTGCTGGTTAA
- Protein Sequence
- MVRKYKRKSSRQSWSEEDMVEAVQLVSNEKMSCRKAAEQLGVPRATLTRKVLKCRETNENVFTVCKKGLGFSTVFNAEQENDLCKYILLMEERMYGLTPEDIRKIAFQLAVRSDLKNNFNKEKEMAGEDWFQKFMKRHPDLSLRKPEATSADRASGFNKQEVEKFYDLLDENTQKYNLTSKSIFNVDEFGTSVVPKCVPKIVAMKGKHQVYSRKSAERGKLVTAEICYSADGKYMPVMLIFPRSRDKERYSEGKPEGAWAEFNKSGWLDTEIFTKWFKQFIIFSQSTKESPVLLLLDGHATHVKNIEVVDLAQENGVIILCLPPHCTHRLQPLDVSFIKPLSTFYAKETSKWLRMHPGRVVSMFEIFSIFGKAFEQAATISTAKNGFEKTGIWPFNRNLFNDSDFSAVLTEKEDSFCSNVENEERRSFRQFITEVQSINDSGVPNSPKNKEELSVSSSTVQQPDETFVEELVDKIQNDLRNDHLLNEPIAEDFDLENMLQDSTDCVDLTLPVTDAENIPSVPVKVLSTFDSNKNVILPKGGKSVVKPKGRKKGFTAVISSPEYREILMSSKSKAEPKRAPKRRKMNKENVSQSQASVQNAVQLQVPIQLIECMQPFPILTQNPKPIMPNDRPVSVPSLSFQPVSTQLLPGESLATIRPVNFQQSRITYPTYPGVTIRPVNGTIAG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00879544;
- 90% Identity
- iTF_00879544;
- 80% Identity
- -