Lbou018634.1
Basic Information
- Insect
- Leptopilina boulardi
- Gene Symbol
- KBTBD12
- Assembly
- GCA_011634795.1
- Location
- PHTE01000515.1:1609-3658[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.0001 0.085 13.0 0.0 2 42 194 234 193 237 0.84 2 4 3.7e-09 3e-06 27.2 0.0 5 42 247 284 244 287 0.86 3 4 0.0018 1.5 9.0 0.0 19 34 312 327 299 333 0.77 4 4 6.5e-12 5.4e-09 36.0 0.1 4 42 358 396 355 399 0.92
Sequence Information
- Coding Sequence
- ATGTCAGAGGTCAACAATCAAATTCAAGTTATTGAAAGAACATGTCTACAATGGGAAGattatcaaaatcaattttctggCGTTGTTCGTCAATTATTGGAAGAAAATTGCATGGTGGATGTTACACTATCTGTATCGGGACAACGCATACTTGCACATCGCATTGTTCTTTGTGCTTTCAgtacttttttcaaagatTTGTTAAGTCAGGTGACTGACGATCATccagttattattttaactgacATGACTCCAGAATGTGTTAGaggaataattgaatttatttatcaaggAGAAGCATATTTTCCCGCtgatagtataaaaaatattttggatactgcattttatcttaaaattgcTGGATTAATggagtataaaATCAGTGAGACAGtatcaaaattaaaggaagatgaaattaatttacaagaatcgaatttaaatgaaattgaagatGAAGAAGTATTAGATGTTTTTGAACATGTTTATGAGGATACAAATGAACAATCGGAACATAGTGCAGAAgaaaattcggaaaataaaaaaagaaaacgacgTTATTCAATGAAACGTGAATATAGTGAAGATATGCTTGCTAATGCTATTAGTAATTTACGCGATGGACAAACATTAATTGAAGCTGCTACAAAAAATCATATACCACGTTCAACATTGTATATGCGAGCAAAAGCATTGGGAATTCAATTACAAGCTTGCCGAAATGAATATCCCGCTGAATGTATGAAAGGAGCAATTGATGCTGTTATtggaGGATCGAGTTTACAGACTGCATCCGAAATGTTCGGTATTCCAAAAACAGTTCTTTGGCGACGAATGCAAAAAGAAGGGTATCAAGTATTTCGTCCTGAATTGAAAAGAACTTATGGCTCGGATAAAAGAGAAGCTGCTGTTAAAGCATTGGAACGAGGGGAAAATCTCTCCAAAGTAGCGCAGGAatatcaaatACCAAAAACAACATTATTTCGTGATAAGACACGATTAATTGATCAAGGTAAATTGCCAATgtcattttggaaaaaaagaaaaacggaAAATGAAGCAGTTAAACGATTTCGACTCGAGGAAGCCGTTGCTGCATGTAAAAGTGGTAAAATGTCACAAGCCGCAGCATCAGTTTGTTATCGTATTCCAAAAACAACAATATGGAGACGATTGCAGCAagataattcgaaaaataaacgaaaattaaaatctgatGGTACAATTAATACAACGGCAAATACAATAGATACTGATGAATTCACATTTTGTGAGGTTACGTCAGGAATTCCAATAACGTATATAGATGAAAATAGTATTCCCGAGGATTCAGTTATAATTCTCACAACTGAAGATGTTGAGGAATTGAGTTTGGAAAATAGGAcacaaattattgtaaattcgAATGTTAATCAAGAATTTATCACTAATTCAGAAAGTGATTCCACTTATACTGTTTCGAAAAGTTAG
- Protein Sequence
- MSEVNNQIQVIERTCLQWEDYQNQFSGVVRQLLEENCMVDVTLSVSGQRILAHRIVLCAFSTFFKDLLSQVTDDHPVIILTDMTPECVRGIIEFIYQGEAYFPADSIKNILDTAFYLKIAGLMEYKISETVSKLKEDEINLQESNLNEIEDEEVLDVFEHVYEDTNEQSEHSAEENSENKKRKRRYSMKREYSEDMLANAISNLRDGQTLIEAATKNHIPRSTLYMRAKALGIQLQACRNEYPAECMKGAIDAVIGGSSLQTASEMFGIPKTVLWRRMQKEGYQVFRPELKRTYGSDKREAAVKALERGENLSKVAQEYQIPKTTLFRDKTRLIDQGKLPMSFWKKRKTENEAVKRFRLEEAVAACKSGKMSQAAASVCYRIPKTTIWRRLQQDNSKNKRKLKSDGTINTTANTIDTDEFTFCEVTSGIPITYIDENSIPEDSVIILTTEDVEELSLENRTQIIVNSNVNQEFITNSESDSTYTVSKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00879877;
- 90% Identity
- iTF_00882861;
- 80% Identity
- iTF_00879877;