Basic Information

Gene Symbol
ct
Assembly
GCA_011634795.1
Location
PHTE01000115.1:289784-375362[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 4.7e-28 5.7e-24 84.3 0.0 2 72 368 439 367 444 0.95
2 3 7.9e-30 9.6e-26 90.0 0.0 2 77 769 849 768 851 0.90
3 3 5.1e-31 6.1e-27 93.9 0.0 3 75 1012 1085 1010 1089 0.95

Sequence Information

Coding Sequence
ATGCAGGCCTCTGCTGAAGCAAGTACCTTCGATCTCCAGGCAATGCAGTCCATGGAATGGCTCTTCAGAAAGGAACGTATCTACTTGCTCATGCAATTCTGGCAACAGaaAGCAAGCTTGGCTGAAAAGGAGGTGACTGCATTAAAGGAGCAACTTGCCGCAGTGAACGATGGAAATTCCAAGACTGAGGGACAAAATTTATCCCAAAATCCTCAAGGAATCGAACAAAGTCATGATTCCAGTAATCCAAGGAGGACGCCAAACAGTAACATTGAACAAGAACTTCAAACAAAGGACAAAGAGATTAGCCAACTTGTGGAGGAAATATCAAGGCTTCAACAAAGTTTACAACGACTTCAGGAATCAAGTGCACAGACAGCGGCGCGTTTAGAGGATGAATTAGAAGCGCGTCGACAACATATTAGTAGACTTGAgagtaaattagaaaaacaaaaagattatGATGATcttaaaagagaaataagCGTTGTAAGGTCGGTTGATCTTTCACAAATACCAACTAGTGAACCTGGTAAAAGTCTCGAACATCTTCTTATGGAACGCTCAAAAGCCCTTCAACAAGCAGAGAATCTCAAACCACCAAGCACGCCTGACAATctagATCCAATTTCATCTTCAAATACACCTGGTAAATCGACAACACCATTGGGTTCATTGGATGCAACTGAAAAAGCCTTAACACCAATTCCCGGCCATGAAACACCAGCACCACCAACGCCATCATCAACGGCATTAACATCACCACCTGCAACATTACCACCAGCACCACCAACATCAACTATCGATTCAAATGGTGCAAATCAAGTAACAACACCTAAAAGTCCCGCTGAAGAATcatgtaacaataataacaacaataatagcCATCATTTGACAAACAACAATATTGGCGCACTTAGTGTTTTAGACAGTTTAAAGGGTCCATTTCGTTTTGATGAAAGAACACATCCCTTTCGATTTGGTGATGAATTCGGAGCAGCTGGAATGGCATGTAGACTTGGTGAATCCCTTATACCAAAAAGTGATCCAATGGAAGCAAGACTACAAGAAATGTTACGCTACAATATGGATAAATATGCATCACAAAATTTGGATACATTAAATATTGCAAGAAGAGTACgtgaattattatcaatacaCAATATTGGACAGAGATTATTTGCCAAATATGTTCTTGGTCTTAGTCAAGGAACTGTTAGTGAACTATTGAGTAAACCAAAGCCATGGGACAAATTGACTGAAAAAGGTAGAGACAGTTATCGAAAAATGCACGGATGGGCTTGCGATGATAATGCTGTTTTGCTGCTCAAGTCCCTTATTCCTAAAAAAGGCAAGGAGCAAGGAATGCCAGCATTTGCTCGTGGTCCACAGGACGGCCCAACAGAAATGAATGACGAAAGATTTGCTCATATTCTTTCGGAATCTGGCCATCTACAATTAAGAGGTGAACACGAGATATCAAATGATGCCGATAGCAAGAGTCCAAGTCGTGTTGGCTGTCCAAGTCCATTTAGTAAGGAACGATTGGATAGTCAAAATCGTAGactaaaaaaatacgaaaacgATGACATTCCACAGGAAAAAGTTGTGAGGATTTATCATGAAGAATTAGCAAAACTCATGGGACGAAGAGTCGATGATCTTCGTGGACCAAGAGATTTTCTTCAaagCGCGATGTTTCCAAACTTTTTCAGTGGCACACCAGGTCTTCAAGGTATGGAACGTACACAGGATGAAATACGTATGGCATTGGATGCCTATCATCgtgaattacaaaaattgaatgttgTCTCTGGTCAAAATCCCACATTAGGTGGACTTCCTCTATCTGGTTTACCAAGTATTCTATTACAACAACAAGCACTTCAACAACATCATCTAGCGACAAATGGTGGAGTTGTTCAAGATTTAAGTTTAGGTAAACTAGATCCAAGAAATAAAATGATGAATGGAGTGACAGaggaggaaaaagaaaaaatggaagAGGCTATGAGGCATGCTGGTAGTGCTTTTTCATTGGTGAGGCCAAAACAAGAACCAACTGGTCCACAATCAACACCAGGAGGTTCAAGTGCCAGTTCACCATTAGGTAATTCAATTCTTCCACCTGCAATGACGCCGAGTGAAGAATTTGCCGGTGCTGCTGCTGCCAGTCCACTTCAAAGGATGGCTTCAATCACCAATAGCTTGATCAGTCAACCGTCCACGCCGACACATCATTCGGCTAACCAAAGACCTCTTAAAGCCGTTCTTCCTCCAATAACACAACAGCAATTTGACATGTATAATAATCTAAATACCGAAGATATTGTCAAGAGGGTAAGTAAAGTGgTAAAAGAACAACTATCACAGTATTCAATTTCTCAACGACTATTTGGCGAATCTGTATTGGGCCTATCGCAAGGTTCCGTATCTGATTTACTCGCTAGACCAAAACCATGGCACATGCTCACGCAAAAGGGACGGGAACCTTTCATCAGGATGAAAATGTTCTTGGAGGATGACAATGCTGTACATAAATTGGTCGCCAGCCAATACAAAATTGCTCCCGAGAAATTGATGAGGACCGGCGGCTACGGCGGCCTGCCTCGTAAGTTTAACTCAGCTTGTGGAACACCTATGAAACCAATGCCACCAACAAAACTCGTACAAGAACAATTGCAAAATGCAGCCAAAGCTCAAGCGGCAGTACAGGCTGCAGCTCAAGCTGCCGCACAACATCAACAGGAAAGTCAAATGCAACTTGGACCACCACCACAAAATCCTCAACATTCACAACATCCACAACCACCACCACCAATGATGTTAACACCATCAGGTCCTCATCTTCCACATTCTCAACTAAGTATGCAAGAACTTcagaaaaaacaacaacaacaacagcagcagcaacaacaacaacaacaacaacaaattaatttacattcacCTCATCATCAAATGGCACCATCGCCATTAAGAAGTCTTCATCCTCACATTTCACCAAGTGTTTATGAAATGGCCGCACTAACGCAAGATCTCGATACACAAACAATCACAACGAAAATAAAGGAAGCTCTTTTAGCAAATAATATcggtcaaaaaatatttggcgAAGCAGTATTGGGATTATCGCAAGGTTCTGTTAGTGAACTTCTAAGTAAACCTAAACCCTGGCATATGTTGAGTATAAAAGGAAGAGAACCATTTATTAGAATGCAACTATGGTTATCTGATGCTCATAATGTTGATAGATTACAAGCACTAAAAAATGAACGACGTGAAGCTAATAAAAGACGACGCAGCAGTGGTCCAGGACATGACAATAGTTCAGACACATCAAGTAACGATACAGCTGAATTTTATCATTCTGCATCACCAGGACCTGGTCCAACATCAGCGAAAAAACAACGTGTTCTCTTTAGCGAAGAACAAAAAGAAGCCTTAAGGCTTGCATTTGCCCTAGATCCATATCCCAATGTATCAACTATTGAATTTCTTGCCGGTGAATTAAGTCTTTCATCAAGAACAATAACAAATTGGTTCCATAATCATCGAATGAGATTAAAACAACAACCACCACATGGACAACCAGAACCACAATCGCCAAGAGAACCCGGACAACCATTTGATGCCGTTCAATTTAGATTGATGTTAAATCAAAAACTCCTCgatattcaaaaagaaagaCTTTGCCTTGGTAGTGTACCAATGTCCTATCCACCCTATTTCAATCCAAATTTAGCCGCTCTTGTTGGCAATGCCCTTAAGGAACAATGTTCCGGTCTTGATCTATCAATGGGATCATTGAAACGTGAACCAATGCAAGAATTTGAGGACGAAGACGATGCAATGAGTAATTTAGGTAGTGAAGATTCTGAAGGTTCAGCAGGCAGTATTAAACGTGAACCAACTGAAACACCATCGGCACCTACAACTGGTAGATCGAGTAGACGAAAACCTGCAGCACCACAATGGGTTAATCCAGAATGGCAAGAGCCAACAAGAACTGGCGATGAGGTAATTATTAATGGTGTATGCGTAATGCAAACAGATGATTATGGTGTCAAGAGAGAAAACGAAGAGACTGTAAGAGTTGAGCCAACGCCCGTTCAAGATAGATTTGACGATGATGCCCAAAGTGATGTATCATCAGTTTCGGCAAATAATCCCCAAGACCATGATAGTCCATTACCAAGTCCAAAATCAGGTCAAACAAGTCCTGTGACATCACCGCGACCACCTTCAGTTCAACAGACACAACAATCAACGGAGGAAAGTCCCAAAGAGATCGTGAAACATGAACCCGAAGAAACGTGGgattactaa
Protein Sequence
MQASAEASTFDLQAMQSMEWLFRKERIYLLMQFWQQKASLAEKEVTALKEQLAAVNDGNSKTEGQNLSQNPQGIEQSHDSSNPRRTPNSNIEQELQTKDKEISQLVEEISRLQQSLQRLQESSAQTAARLEDELEARRQHISRLESKLEKQKDYDDLKREISVVRSVDLSQIPTSEPGKSLEHLLMERSKALQQAENLKPPSTPDNLDPISSSNTPGKSTTPLGSLDATEKALTPIPGHETPAPPTPSSTALTSPPATLPPAPPTSTIDSNGANQVTTPKSPAEESCNNNNNNNSHHLTNNNIGALSVLDSLKGPFRFDERTHPFRFGDEFGAAGMACRLGESLIPKSDPMEARLQEMLRYNMDKYASQNLDTLNIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDDNAVLLLKSLIPKKGKEQGMPAFARGPQDGPTEMNDERFAHILSESGHLQLRGEHEISNDADSKSPSRVGCPSPFSKERLDSQNRRLKKYENDDIPQEKVVRIYHEELAKLMGRRVDDLRGPRDFLQSAMFPNFFSGTPGLQGMERTQDEIRMALDAYHRELQKLNVVSGQNPTLGGLPLSGLPSILLQQQALQQHHLATNGGVVQDLSLGKLDPRNKMMNGVTEEEKEKMEEAMRHAGSAFSLVRPKQEPTGPQSTPGGSSASSPLGNSILPPAMTPSEEFAGAAAASPLQRMASITNSLISQPSTPTHHSANQRPLKAVLPPITQQQFDMYNNLNTEDIVKRVSKVVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAVQAAAQAAAQHQQESQMQLGPPPQNPQHSQHPQPPPPMMLTPSGPHLPHSQLSMQELQKKQQQQQQQQQQQQQQQINLHSPHHQMAPSPLRSLHPHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNVDRLQALKNERREANKRRRSSGPGHDNSSDTSSNDTAEFYHSASPGPGPTSAKKQRVLFSEEQKEALRLAFALDPYPNVSTIEFLAGELSLSSRTITNWFHNHRMRLKQQPPHGQPEPQSPREPGQPFDAVQFRLMLNQKLLDIQKERLCLGSVPMSYPPYFNPNLAALVGNALKEQCSGLDLSMGSLKREPMQEFEDEDDAMSNLGSEDSEGSAGSIKREPTETPSAPTTGRSSRRKPAAPQWVNPEWQEPTRTGDEVIINGVCVMQTDDYGVKRENEETVRVEPTPVQDRFDDDAQSDVSSVSANNPQDHDSPLPSPKSGQTSPVTSPRPPSVQQTQQSTEESPKEIVKHEPEETWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00879518;
90% Identity
iTF_00879518;
80% Identity
iTF_00879518;