Basic Information

Gene Symbol
Ubp1
Assembly
GCA_011634795.1
Location
PHTE01000072.1:218338-234074[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.57 6.9e+03 -3.5 0.5 11 48 67 104 58 107 0.65
2 2 5.6e-60 6.8e-56 189.4 0.0 9 220 220 430 210 433 0.85

Sequence Information

Coding Sequence
ATGGAGCTCCAATTAATTATGGATACTGGACCTGAAACCCTCAGTGGAGCAATGTGGTTAAACAGTAATTCTTCGCCATCCTTTCAACAAGTTACATCAAGCCATCAAAATGTATGTGAAGGGATCACAGCTCAAtCAATGGGATATCATGGCCCGAGCAATGAACTTTGGCAAGAGAAGCGAAATATGGTTAAAAATTCTCCAGAATCGGAATCACAAATACGTTCTAATAATGCGTCACCCCATAATAATTCAACATCCATTGTTCTTAATCAAACGAAAAATCTCCTCAAACGTACAGCCGAGGATTCTTTGCAGCAAATCGAGGAAATCGACAGAAAACATGCTAGAACCGAAGGATCTGTAGGAAGTAATGGATCTGGACAAGGTTGGACTACACAAGTGGAAGAACTTGCAGAACATTTGGCTGCTGATTTTGATAATTCTTTGTCAGCTCTTGCCGCCTCCGATCTTGCCACTGCTGTTGCTTCTTATAATATgagttTAAACCATGTTTCACAAAGAAGTGTTAATGTTGCACCAACAAATAATGGAAATGTCGGTTTACTGGACCCAGACAGCAACAACAATGGACAAAATGCACCTAGTCTTCATCAGCTGTTGTATAATTCAAATGAAGAATATCCTCCAACATCCTCTTCCACAAATCATGTTTCGTCTTCTCAGCAAGGTTACGAATCCAATGAGGATTGTCGaTTTCAGTACGTTTTGGCAGCAGCGACAAGTATTGCTACCAAGGTGAATGAAGAGACTTTAACTTACTTAAATCAAGGACAATCTTATgagattaaattgaaaaaactagGCGATCTTTCAGCTTAtcgtggaaaaattttaaagGGAGATCCGACTTTTTTGTTCCAGTCAACTATTCGTATTTGCTTTCATGAAAGACGATTACAATATACTGAACGAGAACAAATTCTTGCTTGGCAACGTGCAAGACCCGGTGAAAGACTTTTGGAAGTAGATGTGCCTCTTAGTTATGGTATGGTAGATGTTTGTCAACCTTCTCCAACAAATAACAGTGTGGATTTTATGTGGGATCCCACCAAAGAAGTTGGTGTTTATGTCAagataaaTTGTATCAGTACTGAATTCACACCAAAAAAACATGGCGGTGAAAAAGGTGTACCTTTTCGAATCCAAGTTGAAACTCGTTTTCCAGATGGATCAAGATTACACGGCGCTTCTTGTCaagttaaagtttttaaactaaaaggaGCTGATCGAAAACACAAACAGGACcgtgataaaattttgaaaagaccTCCCCATGAACAAGATAAATATCAACCCAGTTATGACTGCACTGTTCTATCAGACattccaCTGGAGTCTCTTTCATCATCTActtcaataattcaaaatgctGCTAGTCCATATGCTCCATCAGAGGCAATATCACCACAAAGTCGTACTACAATCAGTGGAAATTCTTCGCCAATTTCAACTCCTCTATCTCTTTCTGTGGGTAACACTGGcgttctgccaattatcacaGCTTCCGAATCTGTAAAAGAGGATCCCATACCAGCAGCAGCACTTCCATCTCCAGCTGCTATAATTTCCGAACAACCTGATACAAACattGTCTCATATCCCTTAGATTTATCTCCAGATGCAAATGCATCACAAACATCTGCTTGGTTACGAGGGGCgcgttttcaaaattttgaatcaacTTTTGCCAATTTTTCAGCTTCTGATATTTTACGCTTATCACGAGATGACTTGATTCAAATTTGTGGTCTAGCTGATGGAATCAGACTATACAATGCTTTACATTCAAAAGCACCTGCGCCAAAATTGagtctttatttttcaattgaaggCAACAATTCACTTTGGCGAGTTGTTTATTTGGAAAGTCTTACTAGTGCTTCTCTCACAAGTAAACTAGTTAAAACATTGAATTTGCCTCAAGAAAGATTGCATTCTATGCTTTTACTCGGTCCACAAGGAATTCATATACTAGTCACCAATGAATTAGTGGCGAATATGAAAGATGAAAACATGTATTTCGTTGAAACTATCAAAGatGTAAATAGCGACAGATACAAATTGCTTTTAAAGCCTTCTTCATGCTGA
Protein Sequence
MELQLIMDTGPETLSGAMWLNSNSSPSFQQVTSSHQNVCEGITAQSMGYHGPSNELWQEKRNMVKNSPESESQIRSNNASPHNNSTSIVLNQTKNLLKRTAEDSLQQIEEIDRKHARTEGSVGSNGSGQGWTTQVEELAEHLAADFDNSLSALAASDLATAVASYNMSLNHVSQRSVNVAPTNNGNVGLLDPDSNNNGQNAPSLHQLLYNSNEEYPPTSSSTNHVSSSQQGYESNEDCRFQYVLAAATSIATKVNEETLTYLNQGQSYEIKLKKLGDLSAYRGKILKGDPTFLFQSTIRICFHERRLQYTEREQILAWQRARPGERLLEVDVPLSYGMVDVCQPSPTNNSVDFMWDPTKEVGVYVKINCISTEFTPKKHGGEKGVPFRIQVETRFPDGSRLHGASCQVKVFKLKGADRKHKQDRDKILKRPPHEQDKYQPSYDCTVLSDIPLESLSSSTSIIQNAASPYAPSEAISPQSRTTISGNSSPISTPLSLSVGNTGVLPIITASESVKEDPIPAAALPSPAAIISEQPDTNIVSYPLDLSPDANASQTSAWLRGARFQNFESTFANFSASDILRLSRDDLIQICGLADGIRLYNALHSKAPAPKLSLYFSIEGNNSLWRVVYLESLTSASLTSKLVKTLNLPQERLHSMLLLGPQGIHILVTNELVANMKDENMYFVETIKDVNSDRYKLLLKPSSC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00880221; iTF_00880997;
90% Identity
iTF_00880221;
80% Identity
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