Lari013461.1
Basic Information
- Insect
- Leptophobia aripa
- Gene Symbol
- nfxl1
- Assembly
- GCA_951799465.1
- Location
- OX637280.1:196118-198601[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 3 1.9e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 19 0.031 2e+02 2.2 0.2 4 10 169 175 168 176 0.96 3 19 4.7e-07 0.003 17.6 15.9 3 19 186 202 185 202 0.95 4 19 3 1.9e+04 -4.4 1.4 10 14 209 213 208 213 0.71 5 19 3 1.9e+04 -4.2 0.6 5 6 230 231 227 234 0.45 6 19 6.3e-07 0.004 17.2 13.9 3 18 239 254 237 255 0.91 7 19 4.9e-09 3.1e-05 24.0 10.5 1 19 290 308 290 308 0.99 8 19 7e-08 0.00045 20.3 19.7 1 19 344 361 344 361 0.97 9 19 2.6e-07 0.0016 18.5 16.2 1 18 395 412 395 413 0.97 10 19 2e-09 1.2e-05 25.2 14.1 1 19 422 440 422 440 0.99 11 19 3 1.9e+04 -6.4 3.0 3 7 470 474 469 474 0.73 12 19 0.4 2.5e+03 -1.3 9.5 9 19 488 498 486 498 0.89 13 19 0.03 1.9e+02 2.3 9.5 3 12 509 518 508 518 0.90 14 19 0.47 3e+03 -1.5 3.5 14 18 547 551 547 552 0.87 15 19 0.68 4.3e+03 -2.1 0.3 8 12 568 572 568 572 0.78 16 19 0.0033 21 5.3 5.7 1 11 588 598 582 599 0.91 17 19 3 1.9e+04 -5.4 2.4 4 8 611 615 611 616 0.68 18 19 0.0003 1.9 8.7 15.8 3 18 629 645 628 646 0.84 19 19 0.00024 1.5 9.0 9.4 1 15 687 700 687 706 0.89
Sequence Information
- Coding Sequence
- atGGCACGGAGATACCGGGATGCTGCTGCAAAGTTACAACAAAGCGTACACAAGcacttaaaagaaataaagaatcTGTCTTCATCTGAAGATGAAGAACCATATGAACCCAGTGTATTGGAAGGTGTTTTCCAGAGTTACTGGCGTGGTGGTGGTGATACTCATATGACTAACAGAACAAGGAATCTTCTAGAAGAAGCACTTAGCGGTCGTTCTGTTActtgtttaatttgtattggATCCATTAAAAGAGTCGATGCAATCTGGACATGTGACCACTGTCATTCTTACTTTCATCTATCATGCATTCAAAAATGGGCTAATGATAGCATAAGCTTGCGTTCCGAAGAGATTCAGGCTCCAATCGTAATTGTCAAgccaaaaaatattgaatggtGTTGTCCTAAATGTAGGACCACATACAGTAAAGAGAAAATTCCACACAAGTATCGCTGTTTTTGTGGTAAAACTGATGATCCATTATACCATCCATGGCTAGTACCCCATACCTGTGGAGAAATCTGTGGACAACAACTGTCTATTAGTGATAACTGTAAACATAAATGCTTATTACTATGTCATCCTGGCCCTTGCCCGCCATGCCCTCAGACAATAAATGGAATGTGCCACTGTGGAAATGAACGGAAAAGAATAAGATGTAGTGCAGATAAATGGTCTTGTGGTGAAAcatgtaaaaaattacttcCTTGCAAGTCTCATAAGTGTGAAAATATATGCCATGAAGGCGATTGCTTGCCTTGTCATTATACCAGTCTACAGCATTGTCTCTGTGGTTCAGAAAAAGCAAAACGGTCATGCAATGATCTTTTCTGGCAGTGCTCTAAAATTTGCAATAAAGAATATTCATGTGGGTTTCATACATGTTTGGATGTATGTCACACAGGGTTGTGTGGCCCTTGTCCAAATTCAGGCCTCAGGACCTGTCCTTGTGGAGCTATTCAGCAGTATGTACAATGCCCAGGTACTATAGAAACATGTCTTAGTACATGTGCTAAAAAGCAAGAAGGTTGTGGACATACGTGTCCAGAAAAATGTCATAGGGGACCATGTCCACCATGTCAAGTgatggttgaaaaggcatgtCACTGCTCCACACATGTACGCTCATTACCATGCAGCAAAGACTTTAGGTGTGACACCAAATGCAGAGGTATCAGAGCATGTGGAAAACATGCGTGTGCTCGTAAATGTTGCAGTGGTAACTGTCCTCCGTGTGAAAAAGTGTGTGATAAGCCATTGCAATGTGGCCGTCACAAATGTACAACAATATGTCATCGTGGCCCATGTTATCCTTGTCCAAGGGAATCAAAAGTTATGTGCCGTTGTAAAGAAACATTCATAACAGTACCGTGCGGCAGAGAACGATATGCAAAGCCACCTAAATGTAAGCaccaatgtaaaattaaatataaatgtgggCATATAGAAGAAAACAAACATACCTGCCACTTTTGCGACTGTCCCCCTTGTAAAGCTGGGTGTAACAAATCTTATGAGAAATGTGAGCATAAATGCAAAGAGAAATGTCATGAGTATGTTGTAGTGGTATTTAAACAAGTTGAGAAGCCAGCCACACCTTGGGAGGTCCAACCACCAAAGACAAAAGTTGTGGCTTTGGATTGCCCACCTTGCGAGACTCCCGTATCAGTTATATGTTTCGGAGAACATGACTCTGAACTGCAGCCCTGCCACTCGGCATCACGTCGCTGCTGTGGACGGCAATGTGGCAAAAACTTAGACTGTACCAACCATAATTGTTCCCTACTGTGTCACTTATATAGCCCTGACTCAGATTATCCAAATGTGCCCCACTCATGTAAACAATGTGATCGGGAATGCTCTGCACCGAGACCATCAACATGTACTCACAGATGCCCTAAACGTGTTTGTCATCCTGGAACTTGTCCACCATGTGAGGTGTTAGAgagaattaaatgtttttgtggaattacagaaatatatttacgatGTCGAGAACTATCTACAGCTAATCATGAAACTTTAAGTTGCAAGCAACAATGCCCTAAGAATTTAGAGTGTGGACATAGGTGTAAAAAACTCTGCCACAAAGACATCTGTGAAGAGAATCAAATCtgtatgaaaaaaacaaaaattcacTGTTCCTGTGGTAATTTAAGGAAAGAAGTGTCTTGTAAAGCGGTACAATCGTGTGAAATTAAAGTTGAATGTGATATAAGTTGTGAAGAAAAGATTTCGGCAATGAGATGTGAAAAGGAGAAAGAAGAGAAACGTTTAAAAGAGTTAGAAGAGGAACGAAATCGCAAGGAGTTGGCAGAATATGAATGGAAACTTAGtggaaaaaagaaaaaatacaaagaaaagAAAATCGTTATCAATGAAGACAATAGAAATATGGTGCAAAAATTGTGGGTTCCTATTTTAAGCATTGTAATTGCAATTTTGTCAGGTGTTTTGTATACTTTACACTTTTCAGAGATGTAA
- Protein Sequence
- MARRYRDAAAKLQQSVHKHLKEIKNLSSSEDEEPYEPSVLEGVFQSYWRGGGDTHMTNRTRNLLEEALSGRSVTCLICIGSIKRVDAIWTCDHCHSYFHLSCIQKWANDSISLRSEEIQAPIVIVKPKNIEWCCPKCRTTYSKEKIPHKYRCFCGKTDDPLYHPWLVPHTCGEICGQQLSISDNCKHKCLLLCHPGPCPPCPQTINGMCHCGNERKRIRCSADKWSCGETCKKLLPCKSHKCENICHEGDCLPCHYTSLQHCLCGSEKAKRSCNDLFWQCSKICNKEYSCGFHTCLDVCHTGLCGPCPNSGLRTCPCGAIQQYVQCPGTIETCLSTCAKKQEGCGHTCPEKCHRGPCPPCQVMVEKACHCSTHVRSLPCSKDFRCDTKCRGIRACGKHACARKCCSGNCPPCEKVCDKPLQCGRHKCTTICHRGPCYPCPRESKVMCRCKETFITVPCGRERYAKPPKCKHQCKIKYKCGHIEENKHTCHFCDCPPCKAGCNKSYEKCEHKCKEKCHEYVVVVFKQVEKPATPWEVQPPKTKVVALDCPPCETPVSVICFGEHDSELQPCHSASRRCCGRQCGKNLDCTNHNCSLLCHLYSPDSDYPNVPHSCKQCDRECSAPRPSTCTHRCPKRVCHPGTCPPCEVLERIKCFCGITEIYLRCRELSTANHETLSCKQQCPKNLECGHRCKKLCHKDICEENQICMKKTKIHCSCGNLRKEVSCKAVQSCEIKVECDISCEEKISAMRCEKEKEEKRLKELEEERNRKELAEYEWKLSGKKKKYKEKKIVINEDNRNMVQKLWVPILSIVIAILSGVLYTLHFSEM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01204545;
- 90% Identity
- -
- 80% Identity
- -