Basic Information

Insect: Leptophobia aripa
Gene Symbol: -
Assembly: GCA_951799465.1
Location: OX637283.1:4363355-4368625[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.11 6.6 7.5 0.2 2 23 86 108 85 108 0.94

2 25 0.00051 0.032 14.8 2.1 1 23 156 179 156 179 0.95

3 25 1.2 75 4.2 0.5 3 20 186 203 184 205 0.88

4 25 4.1 2.6e+02 2.5 0.9 3 23 214 235 213 235 0.93

5 25 0.00037 0.023 15.2 0.6 1 23 242 265 242 265 0.96

6 25 0.038 2.4 8.9 1.9 1 23 270 292 270 292 0.95

7 25 4.8e-05 0.003 18.0 0.1 1 20 298 317 298 320 0.94

8 25 0.0006 0.038 14.5 4.8 1 23 326 349 326 349 0.97

9 25 3.7 2.3e+02 2.6 0.2 8 23 408 424 403 424 0.84

10 25 1.3 82 4.1 0.1 2 23 452 474 451 474 0.91

11 25 0.3 19 6.1 1.5 3 23 497 517 496 517 0.97

12 25 1.3e-06 8e-05 23.0 1.4 1 23 521 544 521 544 0.96

13 25 0.00064 0.04 14.5 2.2 1 23 607 630 607 630 0.95

14 25 0.04 2.5 8.8 3.0 1 23 635 657 635 657 0.88

15 25 7.2 4.5e+02 1.7 0.4 3 23 712 733 711 733 0.92

16 25 1.7 1e+02 3.7 0.0 2 23 758 780 757 780 0.94

17 25 0.035 2.2 9.0 3.3 3 21 804 822 803 824 0.94

18 25 0.00075 0.047 14.2 1.4 1 21 828 848 828 849 0.96

19 25 0.049 3.1 8.5 0.3 1 23 890 913 890 913 0.94

20 25 0.45 28 5.5 0.5 2 23 984 1005 983 1005 0.90

21 25 0.00098 0.061 13.9 0.0 1 23 1009 1032 1009 1032 0.97

22 25 0.23 14 6.4 1.1 1 23 1036 1059 1036 1059 0.97

23 25 4.7 2.9e+02 2.3 0.3 1 23 1064 1089 1064 1089 0.85

24 25 0.0036 0.23 12.1 1.2 1 23 1098 1121 1098 1121 0.96

25 25 0.0055 0.34 11.5 1.4 1 23 1131 1154 1131 1154 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.11	6.6	7.5	0.2	2	23	86	108	85	108	0.94
2	25	0.00051	0.032	14.8	2.1	1	23	156	179	156	179	0.95
3	25	1.2	75	4.2	0.5	3	20	186	203	184	205	0.88
4	25	4.1	2.6e+02	2.5	0.9	3	23	214	235	213	235	0.93
5	25	0.00037	0.023	15.2	0.6	1	23	242	265	242	265	0.96
6	25	0.038	2.4	8.9	1.9	1	23	270	292	270	292	0.95
7	25	4.8e-05	0.003	18.0	0.1	1	20	298	317	298	320	0.94
8	25	0.0006	0.038	14.5	4.8	1	23	326	349	326	349	0.97
9	25	3.7	2.3e+02	2.6	0.2	8	23	408	424	403	424	0.84
10	25	1.3	82	4.1	0.1	2	23	452	474	451	474	0.91
11	25	0.3	19	6.1	1.5	3	23	497	517	496	517	0.97
12	25	1.3e-06	8e-05	23.0	1.4	1	23	521	544	521	544	0.96
13	25	0.00064	0.04	14.5	2.2	1	23	607	630	607	630	0.95
14	25	0.04	2.5	8.8	3.0	1	23	635	657	635	657	0.88
15	25	7.2	4.5e+02	1.7	0.4	3	23	712	733	711	733	0.92
16	25	1.7	1e+02	3.7	0.0	2	23	758	780	757	780	0.94
17	25	0.035	2.2	9.0	3.3	3	21	804	822	803	824	0.94
18	25	0.00075	0.047	14.2	1.4	1	21	828	848	828	849	0.96
19	25	0.049	3.1	8.5	0.3	1	23	890	913	890	913	0.94
20	25	0.45	28	5.5	0.5	2	23	984	1005	983	1005	0.90
21	25	0.00098	0.061	13.9	0.0	1	23	1009	1032	1009	1032	0.97
22	25	0.23	14	6.4	1.1	1	23	1036	1059	1036	1059	0.97
23	25	4.7	2.9e+02	2.3	0.3	1	23	1064	1089	1064	1089	0.85
24	25	0.0036	0.23	12.1	1.2	1	23	1098	1121	1098	1121	0.96
25	25	0.0055	0.34	11.5	1.4	1	23	1131	1154	1131	1154	0.95

Sequence Information

Coding Sequence: ATGAAAGACTTAAAAGttgAAGTGTCCAATGAATATACCATCGCGAAGCGCAACGCGGAGATATTGGTGAAATTCACAACGACATACCCATTCCGACTGCCTGAGGAGGCTATGGTGTGCGTTTACTGCTGCGAGAGCATCCAGGACGGTCCGAGCTATAGAAAGCACATGGTTGACGAGCATCCCACTTTCAAAGTCCGCATGGCGTTCGCTCACGTCACAGAGGGGTTTCTCAAAGCCGACATCACAGATCTGAGCTGTCGCGTTTGCTTCACAGCATACGACACCCTCGAGGATATGGCGAGACACCTCCGCGACCAACACCAGAAGCCGATTGACGTGAACCACGATCTTGGTATACAGCCGTTCAGGCTGGAGGGTGATAAGCTCCAGTGCGCAATGTGTTCCGCGAAAGCGATATGCCTCAGACAGTTGAGCAGGCACACACAATCGCACTTCTCCAAATTCACGTGCGAGGCGTGCGGCAAATCCTACTCAACCATCACGACTTTGAAGCATCACATAACTTACTCGCACAGCGGTGGCAACAAGATGTGCAGGAAATGCAAGACGACCTTCGACACGTTGGAGGCGAGGCGGGAACACGTGTACACGTCGAAGAAGTGCTGGACGAACATGTGCAATTTGTGCAGCGAGAGATTCCTCAATTGGAAGACGAAACAGGAGCACCTAACGCGTGTGCACGGCCTGACGAAGAAGACGTACGTGTGCCCGGAGTGCCCGCTCGTGTTCGACGATCGTAAGAAATACAGAACACACTTTCGGCTCTCGCACACCGAGGACATATTTGTGTGCACGTGCTGCGGCCTCAAGTTTGACACGAAGAAGAATTTGGACGAACACCGCGTGATACACACGAAGGAGAAGCTGTTTCCGTGTCCGGTATGTTCGAAGGCGTTCCCCCGAAAGAAGAATTTGGTTCAGCACCTGTGGATTCATAGTGAATTGAAGAGGTTCAGCTGTACGCTGTGCAATAAGCATTTCAATCAGAGGGTGACGTGGAAGAGCCATATGAAGTCTTACCATCCGGAGATAGAAGATTATCAGGATATGATGAATAAGAATGTGAAGATCCTGCTGAGTGTTGACAAAAAGCAATCCGCTTTAAACTCGAAGAGAAACGCCGAGGTAATAATCAAAAACACGTCCGCCTATCCGTTCCGATTGCCCGACTCTAAAGttatgtgtatattttgttgtgAAGAGTTCGCGAAACCCTCGGACTTCCGTACGCACATGGACGATGAGCATTCGTACAGTGCCGATGTGAATATGGTGCATTCGTTCGCACACCAGTACGAAGGTTACGTGAAGGCCGACTGTACTGATCTCCATTGCCGCATTTGTGAAGCGCCATTCAACCGTATCGCTGATATCGCGACACACCTGAACGATACGCACGCAGTGTATGTCAATCCATCCGATGTTGGTATACAGCCGTTCAAATTTCACAACGACAAACTGTTGTGCGGCGTGTGCGATAAGAATTTTCCATGTCTGCGTCAGCTCAGCAAGCACACGGCGAGCCATTTTCAGAATTACACGTGCGAGGAGTGCGGCAAGTCGTATACGACACGGAGTGTTTTAAAACAGCACATACGTTTCACACATTCGGGGGGGTGTGTGTGTAGGCGTTGCAGGTGCACCTTTGACACAGCAGAAGATAGGCGTGAACACGTGTTGAAAACGTCCAACTGTTGGCCGTACGTGTGCTCGTTATGTCGTAGTACCCGCTTTTTGCGTTACACGGACAGGGAGGACCATTTGATCAAGTGTCACGGGAGAGTGGTGCGTACGCACCGCTGCACCGAGTGCGGTGTGACGTTCGCGAGCCGATCCAAATACAGAGAACACTTTGCGACAAATCATTCGGAGATTTGTTTCGTATGCACGTACTGCGGCAAGAGGTTCAGCTGCCAGCGGTATATGGATGAGCATCTTGTGTCGCACACCGGTGTGAAACAGTTTGAGTGTGGTTCCAAATTGGAAATACGGCGTAATGACACAAAGAGAATCGTATTAGTTTATCAAACGCCGCAGCGTCGTAACGCGgagttgatattaaaatattcaacagcCACGCCATTCAAAATGCGTTTCAGTCAGATATTGTGCGCGTATTGTCACGACGAGTACGACAATCTGTCCGTATTACGTACACACACGCTCGCGGATCACATGTGTTCAGATTTAAAAAACGTTTTCTATAGAGCCAAagataacttaataaaaatcgatATAACGGCACTGAAATGTAAACTGTGCGACGTTGATATGGCTGATGTTGATCTGTTGATGGCGCACCTGTCGAGGGAACACAATAAACCTGTCAGGTTCAACGCGCGTTTCGGCGTCCTACCCTACAAACAGAACGGCGGCCAATGGCTGTGCGTCTACTGTCAGAAGGTTTTCAAAGAGTTCATACACTTGAATCGTCATATACTGTGTCACTTTATGAATTACAGTTGCGATAAGTGCGGCACGACTTTTGTGTCAGATCACGCGTTGAAAGACCATCACAGGCAGGTGAAGTGTTTCAGGAGCGCGTACAAAGCGAGGAACGGACGCGTACTCAAACCGCGCACAAACGCTGAGATAATACTGCAGTGTTCAACCGCATGTCCGTTTCGTACGTGGAAGAGTAACTTCAATTGTGTATTCTGTAGGGTGCAGACGAACAATCCGAGCAATCTGCGCGTGCACGTCGCGAGCCAACACGAGAATTACGACGTGCAGACCGCGTTCTATAAAAAACTCGGCAAGGAGTTTCTCAAAGTCGACATAACGGATCTGCAGTGCAAACTGTGCTTTCTGCCCGTGAATAACATTGACAGTTTGACGTGTCACCTGAAGGATGACCACCAGCAGGCGATAAGCGACGCGCAGATTGGCCTGTTGCCATTCAAACTGAACGACGGCACCATATGGAAGTGTATTATGTGCCCGAGCGAGTTTAAGGATTTCGTTTCGCTGAAGAAGCACACGTCCGAGCATTTTCAGAATTACGTGTGCGACACGTGCGGCGTCGGTTTCATAACGGAATCCGCGATGATTGCCCACACGAAAATACCACACGAGAATAAATACAGCTGCAGCAGGTGTGTTTCAACATTCTCCAGCCTGCAGGAGCGGAACGTTCACGTCAAAACACAGCACACAACCACACCGTACATGTGTGTGTATTGTAAGGAGAAGCCGCGCTTCGCCAATTGGGAGCTGCGGAAGAAGCATCTGATGGACGtgcataattataaaaccggTGCGGATAAGTACGAGTGCGCCGCTTGCCAGAAGACGTTCAAGACGCGTTCGGGGAAGTACAATCACATGGCGAGGACGCACAGGATGAAGAAGGACTCTGAGTTGAATTATCCGTGCCACAGTTGTCCCAGAGCGTTTACGACGCAGCTGTTTTTGGATAAACACGTTGCTAAGAAGCATTTTGATTGA
Protein Sequence: MKDLKVEVSNEYTIAKRNAEILVKFTTTYPFRLPEEAMVCVYCCESIQDGPSYRKHMVDEHPTFKVRMAFAHVTEGFLKADITDLSCRVCFTAYDTLEDMARHLRDQHQKPIDVNHDLGIQPFRLEGDKLQCAMCSAKAICLRQLSRHTQSHFSKFTCEACGKSYSTITTLKHHITYSHSGGNKMCRKCKTTFDTLEARREHVYTSKKCWTNMCNLCSERFLNWKTKQEHLTRVHGLTKKTYVCPECPLVFDDRKKYRTHFRLSHTEDIFVCTCCGLKFDTKKNLDEHRVIHTKEKLFPCPVCSKAFPRKKNLVQHLWIHSELKRFSCTLCNKHFNQRVTWKSHMKSYHPEIEDYQDMMNKNVKILLSVDKKQSALNSKRNAEVIIKNTSAYPFRLPDSKVMCIFCCEEFAKPSDFRTHMDDEHSYSADVNMVHSFAHQYEGYVKADCTDLHCRICEAPFNRIADIATHLNDTHAVYVNPSDVGIQPFKFHNDKLLCGVCDKNFPCLRQLSKHTASHFQNYTCEECGKSYTTRSVLKQHIRFTHSGGCVCRRCRCTFDTAEDRREHVLKTSNCWPYVCSLCRSTRFLRYTDREDHLIKCHGRVVRTHRCTECGVTFASRSKYREHFATNHSEICFVCTYCGKRFSCQRYMDEHLVSHTGVKQFECGSKLEIRRNDTKRIVLVYQTPQRRNAELILKYSTATPFKMRFSQILCAYCHDEYDNLSVLRTHTLADHMCSDLKNVFYRAKDNLIKIDITALKCKLCDVDMADVDLLMAHLSREHNKPVRFNARFGVLPYKQNGGQWLCVYCQKVFKEFIHLNRHILCHFMNYSCDKCGTTFVSDHALKDHHRQVKCFRSAYKARNGRVLKPRTNAEIILQCSTACPFRTWKSNFNCVFCRVQTNNPSNLRVHVASQHENYDVQTAFYKKLGKEFLKVDITDLQCKLCFLPVNNIDSLTCHLKDDHQQAISDAQIGLLPFKLNDGTIWKCIMCPSEFKDFVSLKKHTSEHFQNYVCDTCGVGFITESAMIAHTKIPHENKYSCSRCVSTFSSLQERNVHVKTQHTTTPYMCVYCKEKPRFANWELRKKHLMDVHNYKTGADKYECAACQKTFKTRSGKYNHMARTHRMKKDSELNYPCHSCPRAFTTQLFLDKHVAKKHFD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -