Basic Information

Insect: Leptophobia aripa
Gene Symbol: -
Assembly: GCA_951799465.1
Location: OX637276.1:2611844-2621126[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0014 0.089 13.4 1.5 1 23 405 427 405 427 0.97

2 10 2.9e-06 0.00018 21.8 1.2 1 23 433 455 433 455 0.99

3 10 3.6e-05 0.0022 18.4 3.4 1 23 462 484 462 484 0.98

4 10 6.8e-06 0.00043 20.7 0.2 1 23 490 512 490 512 0.93

5 10 4.8e-06 0.0003 21.1 0.2 1 23 518 540 518 540 0.98

6 10 8.1e-06 0.00051 20.4 2.0 1 23 546 569 546 569 0.96

7 10 1.3e-05 0.00081 19.8 4.6 1 23 575 598 575 598 0.97

8 10 0.001 0.064 13.8 1.6 2 23 605 626 604 626 0.97

9 10 7.1e-05 0.0045 17.5 0.7 1 23 632 654 632 654 0.97

10 10 0.0044 0.27 11.8 0.2 1 22 660 681 660 684 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0014	0.089	13.4	1.5	1	23	405	427	405	427	0.97
2	10	2.9e-06	0.00018	21.8	1.2	1	23	433	455	433	455	0.99
3	10	3.6e-05	0.0022	18.4	3.4	1	23	462	484	462	484	0.98
4	10	6.8e-06	0.00043	20.7	0.2	1	23	490	512	490	512	0.93
5	10	4.8e-06	0.0003	21.1	0.2	1	23	518	540	518	540	0.98
6	10	8.1e-06	0.00051	20.4	2.0	1	23	546	569	546	569	0.96
7	10	1.3e-05	0.00081	19.8	4.6	1	23	575	598	575	598	0.97
8	10	0.001	0.064	13.8	1.6	2	23	605	626	604	626	0.97
9	10	7.1e-05	0.0045	17.5	0.7	1	23	632	654	632	654	0.97
10	10	0.0044	0.27	11.8	0.2	1	22	660	681	660	684	0.91

Sequence Information

Coding Sequence: ATGGCAAAAAATTGCTATATATGCAACAAGCAAGATGGAGGCGTGGAGAAAACTAAAGTCAACATATTTGATACaaagaCACCAATATCAGACAAAAATGTATCGGCTCTCTTACTTGATGTATCAGGAATAACAGTGCGAGAcaaatgtaaagaaaataacaatttgtgtgcaaaatgttataagaaaatattggaATATGACTATCTTCTGGCTAGACTGAATGAAATGAAGACTGAAATCACgaacaatataaatagatcAGAAGATATAAGATTAACAgaagacaaaataaaaatagagataaaaattgaaaaaccaTTAGAAAATGATGTAAAGAAAAAAGTTCCATTAGTGCTTCCTGCGTCTAAATTGAAACCTCTTCCTCcgggttttaatttaaagctgAACAAATATTTGACTAAAACAAGTCCCATTAAAATGgAAAAGAAAACGCTTATTAAAGCccaaaataatagaaaacaaagTATGGAGTACAAAGTACCTCTAATGCTAACAAATGAATTAACAACCttgttaaataacaaacaactaagtttaaatgattttgttgTTGTCAAAGAAAAGGACGATGAAAATAACGAAGATCAACCTATGGAGATTGATGAAGATGCAGTAATAATGGAAGCAGAAAATGGTATAATCAGTGTTATGTCCCATCAGAAGTTTTTATATGGCAACTCTGATATAGCACTCGTAATGCCTCAAGGGAATGTCTTGGACAACGATGATGGGCATGATTCTAATTCTGATCATATCGAGCTACAAGTTTCTGGTGATGAAGAAACTGCCAAGGCTATAATAGCAGCTGCCAATGAACAAGGTGGAACGTTTATAAAGGTTGAAACTGGTGAAATGTACGAAGTGAAATCAAttgaaagtaaaattaatgagACAAACCAATCAACAGAAGATATGTTACGGTTAGACGAAAATATGGTGGAAGTGGTTGGTGATAAATTCAAATGCCTGTTTTGTGAGAGGaacaataaaaatgTGAACGTGGGTCCTGTGACAGGCGATGCTGAATGCATGATGCAACATTTGAAGAGTGTTCACTCGGCTCGTTTATACCTATGCAATTGTGGTGCTATTATACGAAAAAGAGTTGATTTCAGCGCACATATAGAACAACACGCGAATTCAAAAAGTCTCATAAGTCCCGAAACTGCGGAAAAGCTTAGTAAACTTCACGAATGTGGAATTTGTAAGAAGAAGTTTAgCTCTCGCCTCGTCCTGTCCGGTCATATGAACTCGCACACAGGCGAACGCCCATACACGTGCGACGTATGCGATCGTTCGTTCGCATCGCGGTATACACGACAGGCGCATATGAAGACGCACACTGAACGTCCCCGTCCATACAAATGCAATCAATGTGGGAAAGCGTTCCTGACTCCGCACAATCTACAGCATCACGAGAAGATACATTCCGGTACCAAGGactttgtatgtaaaatttgtggCAAAGCATTCGGCTCCCAACATAACCTGGAAGTGCATGGCGTTATACATACCGGTGTCAAGCCATATATTTGTACAGTCTGCAACAAAGGGTTCGCCCGTCGCGCTGAAGTCAAGGATCATATGAGAATACACACTGGTGAGCGACCATTTGAATGTGAAACGTGTGGAGCGCGTTTTTCACAGAGATCGAATCTACACTCTCATAGAAGGGCGACCCACCTTCAAGACAAACGACACGAGTGCCCACATTGCCCGAAGCGATTCAAACGACGGCGgctGTTGGAATATCACATAAAGTCATCTCACACAGGCGAGCGTCCTTTGCAGTGTGGCGTGTGTGACGCTACCTTTGTTTACCCCGAACATCACAAGAAGCATATGCGTATTCACAGCGGAGAAAAACCTTTCATATGCGAGGTGTGTGGCAAGGGGTTCAATTCCCGGGACAACAGAAACGTGCACCGCTTCACACACAGCGACAGAAAACCATACGAGTGTGTGCTGTGCGGTGCTGGCTATATGAGAAAGAATCAACTCTACCAACATATGAATAATACGGGCCATCTATCGGAGTCTATAGTTGTTAATCGACCGAGAGTCACACAGACGGAAGACGaggaATCAAAAATCCAATCTGTCATAATAAGCGATGATatcaaagataataaaatactggATACGGTGTATGAAGCCAGTGAGTTACAAGTGTTAGATCCAGATGCACATAAAGTCGttgtaACACAATCTGGAACTCCTCCTACCCAGTATATTTTATCTACcgatGCAAAAGCGATGGGCGATATACAAGATAGTGAAACAGTGGGCGAGGACTGCACCTTTATTTCCATAGaaAACCTCGAAGCGGCCACACAAATTGACGGCACCGTCCTGGAAAATATCAATGGTGACCCCCTGGAACAGACGCACttactAAGCGACGGTAATAGCACGCTAcgtttaatacaaatacaacTCGCAGACGGCGGTTGTGGCTGGGTTGCTGTCAGTCAGTAG
Protein Sequence: MAKNCYICNKQDGGVEKTKVNIFDTKTPISDKNVSALLLDVSGITVRDKCKENNNLCAKCYKKILEYDYLLARLNEMKTEITNNINRSEDIRLTEDKIKIEIKIEKPLENDVKKKVPLVLPASKLKPLPPGFNLKLNKYLTKTSPIKMEKKTLIKAQNNRKQSMEYKVPLMLTNELTTLLNNKQLSLNDFVVVKEKDDENNEDQPMEIDEDAVIMEAENGIISVMSHQKFLYGNSDIALVMPQGNVLDNDDGHDSNSDHIELQVSGDEETAKAIIAAANEQGGTFIKVETGEMYEVKSIESKINETNQSTEDMLRLDENMVEVVGDKFKCLFCERNNKNVNVGPVTGDAECMMQHLKSVHSARLYLCNCGAIIRKRVDFSAHIEQHANSKSLISPETAEKLSKLHECGICKKKFSSRLVLSGHMNSHTGERPYTCDVCDRSFASRYTRQAHMKTHTERPRPYKCNQCGKAFLTPHNLQHHEKIHSGTKDFVCKICGKAFGSQHNLEVHGVIHTGVKPYICTVCNKGFARRAEVKDHMRIHTGERPFECETCGARFSQRSNLHSHRRATHLQDKRHECPHCPKRFKRRRLLEYHIKSSHTGERPLQCGVCDATFVYPEHHKKHMRIHSGEKPFICEVCGKGFNSRDNRNVHRFTHSDRKPYECVLCGAGYMRKNQLYQHMNNTGHLSESIVVNRPRVTQTEDEESKIQSVIISDDIKDNKILDTVYEASELQVLDPDAHKVVVTQSGTPPTQYILSTDAKAMGDIQDSETVGEDCTFISIENLEAATQIDGTVLENINGDPLEQTHLLSDGNSTLRLIQIQLADGGCGWVAVSQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01205955; iTF_01204305; iTF_01202695; iTF_01206808; iTF_01205145; iTF_01203483;
90% Identity: -
80% Identity: -