Basic Information

Insect: Leptophobia aripa
Gene Symbol: -
Assembly: GCA_951799465.1
Location: OX637271.1:7704795-7708558[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.71 45 4.9 1.4 1 23 156 180 156 181 0.88

2 19 1.2 77 4.1 0.1 6 23 261 279 261 279 0.97

3 19 0.0096 0.6 10.8 2.6 1 23 286 309 286 309 0.92

4 19 1.5e-06 9.5e-05 22.7 0.6 2 23 333 354 333 354 0.97

5 19 0.00081 0.051 14.1 0.7 1 23 360 383 360 383 0.94

6 19 0.0053 0.33 11.6 0.7 1 23 389 411 389 411 0.93

7 19 3.3e-05 0.0021 18.5 0.9 1 23 417 439 417 439 0.95

8 19 0.95 59 4.5 1.5 1 23 574 596 574 596 0.89

9 19 4.2e-06 0.00026 21.3 0.8 2 23 603 625 603 625 0.95

10 19 1.4e-06 8.8e-05 22.8 0.4 1 23 631 653 631 653 0.98

11 19 1.1e-06 7e-05 23.1 1.5 1 23 659 681 659 681 0.99

12 19 0.00028 0.017 15.6 0.8 1 23 687 709 687 709 0.98

13 19 9.2e-05 0.0058 17.1 3.3 1 23 715 737 715 737 0.97

14 19 0.016 1 10.1 4.9 1 23 743 766 743 766 0.91

15 19 2.3e-05 0.0015 19.0 0.1 1 23 822 845 822 845 0.96

16 19 0.00012 0.0077 16.7 3.6 1 23 851 873 851 873 0.97

17 19 5.8e-06 0.00037 20.9 0.8 1 23 879 901 879 901 0.99

18 19 0.00024 0.015 15.8 1.6 2 23 908 929 907 929 0.96

19 19 0.0008 0.05 14.2 1.5 5 23 938 956 935 956 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.71	45	4.9	1.4	1	23	156	180	156	181	0.88
2	19	1.2	77	4.1	0.1	6	23	261	279	261	279	0.97
3	19	0.0096	0.6	10.8	2.6	1	23	286	309	286	309	0.92
4	19	1.5e-06	9.5e-05	22.7	0.6	2	23	333	354	333	354	0.97
5	19	0.00081	0.051	14.1	0.7	1	23	360	383	360	383	0.94
6	19	0.0053	0.33	11.6	0.7	1	23	389	411	389	411	0.93
7	19	3.3e-05	0.0021	18.5	0.9	1	23	417	439	417	439	0.95
8	19	0.95	59	4.5	1.5	1	23	574	596	574	596	0.89
9	19	4.2e-06	0.00026	21.3	0.8	2	23	603	625	603	625	0.95
10	19	1.4e-06	8.8e-05	22.8	0.4	1	23	631	653	631	653	0.98
11	19	1.1e-06	7e-05	23.1	1.5	1	23	659	681	659	681	0.99
12	19	0.00028	0.017	15.6	0.8	1	23	687	709	687	709	0.98
13	19	9.2e-05	0.0058	17.1	3.3	1	23	715	737	715	737	0.97
14	19	0.016	1	10.1	4.9	1	23	743	766	743	766	0.91
15	19	2.3e-05	0.0015	19.0	0.1	1	23	822	845	822	845	0.96
16	19	0.00012	0.0077	16.7	3.6	1	23	851	873	851	873	0.97
17	19	5.8e-06	0.00037	20.9	0.8	1	23	879	901	879	901	0.99
18	19	0.00024	0.015	15.8	1.6	2	23	908	929	907	929	0.96
19	19	0.0008	0.05	14.2	1.5	5	23	938	956	935	956	0.95

Sequence Information

Coding Sequence: ATGCAAGTTGCAATCGCTGGTTCATCTAAAGTTGAGATTGATGATCGAGATGATTTTACTTATTTGTGTCGAATATGTGCTGTCAAGACTAAGAATATTATACCAATGTTTGGGAAAGATGATGATCAAAAGTTGGTTGAGAAAATTAACAAGTATTTACCAATTGAGGTTTGCAATGACAATTTATTGCCAGCAGGAGTGTGTGAGCAGTGTTCAAATGCTGTGTTAGCATGGCATGAGCTAGTTGAGTGCTGTGTCCAAGCAGATCTTTCATTTCGAAATACCCTTACTGTGACACAAAAACAGGGATTACCACAGCCAATACAAAGTATATCAGCTAACTCACAGGCACCTTTGGATGAAAATGGAATAAAGTTGAAAAAGGAGGTTATGTTTCTCACATTGgtgaataatgttttaactgattttttgaaaaacaatgATATGGATGCTAATGAATGGGTTTATGTTTGTCAAAAATGTTCTAAACAACCCAGCTTTGTCAATGTACCCACTCTCACCAAACATTTAACATCACATCACTGTCAAAATCTTCACAACAGAGAGATGCTCGAGCAGTTTATAACTgcatatataacatttgagGAGGTCCTCCTAACTGATTCTGAATTTGCTGAACTGGACACAGAGTTAAAAACCCCAAAGGTCACAAAAGACGTGGTTTGCCTTTATTGCTGTAGTTCGTTTTCGTCCACCAAAAGACTAATTCATCACCTGAGCAAACATATCGACATAGGATTAAACGGGGGCGTAGTATGTTGCGAACGGAGCTACGAAGACATCAAACTGTTCGAACAACATTTACGAATTAAGCACACGATGCAAATCCCAGCCCACGTGTGCAAGTCGTGCGGCTTCTCGGCAACCGACCAGGTGCATTTGCAACACCACATAGATGCCACGCACAAGGAAACCCCGAGGAAAGAAAACAAAGCCAGTACACTGAGCGACACGAGCCAACGATCGATTCCAGCGGTTTGCCCGGAATGCAACAAGACCTATTCGAACAAATACAACATGTTCATTCACATGGAGACTCATCAAAAGCGCGAGGAGTTCGCGTGCAGCAAGTGCAACAAGAGCTATCTGAACAAGGGCAGTTTGAGTAAGCACATGGAGTTGGTGCACGAAGGCAAGCTGCCCTACGTCTGCTCGGTGTGCGGCGAGAGTTTCCCCACACGGCGAGCCCGACACGTGCACTTCCTGCTGCACACCGGGGAGACTCCGCACGAGTGCTCGCGCTGCGGCAAAGCCTTTCGCTCCAAGAACTCGCTGCGAGGCCACATCGAGGCGCACCTCGACATAAGGAGATACGAATGGCCGGACGGCTCTTACGATAGCGAGGAGTTCGTCGAATATAAAACGGAATATGACGACGAAGTCGATTGTCGAGTGCCGACGCCCAAAGGCTCCATCTCTGATGATGAGCCTCTGTCTCGCATCGCCACCGCCAGACACCCGGTGTCCACATATGAAACGTTTTACGCGGCTCTTCTTCAATTTAGGAATCATTTTGTCAAACAGCACAAGGAGAGTTCTCTGGAGTTTACAGAATCCAGTACGGAGGAAGAGGCCGAGCCGTCGGCTGTCGTCGAGTACGACGACTTGAGTAAGAACAACATGCGCCGAGACCGAATGGACGAACAGACGCGAACGGAACTGCGAGAGGTTCAGTCGAAGGTAAACGGCAAGGTCTGCTTCGCCTGCAGGGTTTGCGGAAAGAACTTGAGTTCGGCCCACACGTACCTGTTCCACAAGAACATTCACACCGGAGAGCGGCCGGGCGTGTGTCACGTGTGCGGGAAGACGTTTCGCGCGCCCAGCGGCCTCCAGCGGCATCTGAAGGAGACGCACGAGAGGGTGAAGCGCTACGTGTGCGCCCTCTGCGCCAAAACCTTCGTCAACTCTCAGAACCTCCGACAGCACATGCGCATCCACACCGGGGAGCGGCCCTACGTGTGCGCGCAGTGCGGCAAGAGGTtcacgcagagcggctcgctGCACGTGCACCTCAAAACTCACAGCGACCTGTTCCCGTTCAGCTGCACGGAATGCGGGGCGCAGTTCCGACTGCGCTCCGGCCTGTCGAAGCACACGCTCAAGCACTCGGGCGAACGGCCGCACGTGTGCGTCAATTGTGGGAAAGGCTTTCGGCAAAAGCACGAGCTGAACAGCCACTCTCTGACCCACAGCAACGCCAAGCCGTTCGCCTGCGCGCACTGCGGGGCCGCTTTTCGGCAGCGGAGGGCTCTCAGGCACCATTGCAAACGGTTGCACGAAGCCAGAGACACGGGCAACGACGTCATAAAAAGTGATGCCTCATCGGGACAGTGCCTCTCCTTTGAACTGGAAAAACGCGATGAAAAAGTGTTTGAAAGTGGCAACAAGAGTGTGCCGGGAGGCCGCCTGAGAAGGCATGCGCGACTGCACGAAGAAAGAGCGTACAGTTGCGACGAATGTGGGCTGGGATTCAAGGAGAGCGGCAATTTGGCTCGGCACAAGCGCGCCATACACAACAAGTTAAAACCGTATGCTTGCCTTATTTGCTCCAAGATTTTCTCCAGAAGTTGTCATCTCGAAGATCACCTCAAATCTCATTCGGGGAGTCGTAACTACGTCTGCGATCTCTGCGGCAAATCATCCAAATCTAGCAATGCGTTGAGAATGCACAGACGAACCCACTCAGCCGAACACACCATTCAATGCAGCTTTTGCGAAGCCAAGTTTAAAAGGAAATCCGAGCTTTGCGCACACGTTTCGGTGCATACCGGAGAGAAGGCTCACGTCTGCGAGTGCGGCAAAGCTTTCCGGTTGCGGAGTCAGCTCAACCGCCACGCGCAGTCCCACGGGCCTCTTCAGACAGGTGTTGCTCGCTTCAAGAAATAA
Protein Sequence: MQVAIAGSSKVEIDDRDDFTYLCRICAVKTKNIIPMFGKDDDQKLVEKINKYLPIEVCNDNLLPAGVCEQCSNAVLAWHELVECCVQADLSFRNTLTVTQKQGLPQPIQSISANSQAPLDENGIKLKKEVMFLTLVNNVLTDFLKNNDMDANEWVYVCQKCSKQPSFVNVPTLTKHLTSHHCQNLHNREMLEQFITAYITFEEVLLTDSEFAELDTELKTPKVTKDVVCLYCCSSFSSTKRLIHHLSKHIDIGLNGGVVCCERSYEDIKLFEQHLRIKHTMQIPAHVCKSCGFSATDQVHLQHHIDATHKETPRKENKASTLSDTSQRSIPAVCPECNKTYSNKYNMFIHMETHQKREEFACSKCNKSYLNKGSLSKHMELVHEGKLPYVCSVCGESFPTRRARHVHFLLHTGETPHECSRCGKAFRSKNSLRGHIEAHLDIRRYEWPDGSYDSEEFVEYKTEYDDEVDCRVPTPKGSISDDEPLSRIATARHPVSTYETFYAALLQFRNHFVKQHKESSLEFTESSTEEEAEPSAVVEYDDLSKNNMRRDRMDEQTRTELREVQSKVNGKVCFACRVCGKNLSSAHTYLFHKNIHTGERPGVCHVCGKTFRAPSGLQRHLKETHERVKRYVCALCAKTFVNSQNLRQHMRIHTGERPYVCAQCGKRFTQSGSLHVHLKTHSDLFPFSCTECGAQFRLRSGLSKHTLKHSGERPHVCVNCGKGFRQKHELNSHSLTHSNAKPFACAHCGAAFRQRRALRHHCKRLHEARDTGNDVIKSDASSGQCLSFELEKRDEKVFESGNKSVPGGRLRRHARLHEERAYSCDECGLGFKESGNLARHKRAIHNKLKPYACLICSKIFSRSCHLEDHLKSHSGSRNYVCDLCGKSSKSSNALRMHRRTHSAEHTIQCSFCEAKFKRKSELCAHVSVHTGEKAHVCECGKAFRLRSQLNRHAQSHGPLQTGVARFKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -