Labn005373.1
Basic Information
- Insect
- Leptomastidea abnormis
- Gene Symbol
- stc
- Assembly
- GCA_030522805.1
- Location
- JAPYZE010001187.1:15969-21120[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 1 4.5e+04 -4.5 1.6 15 19 659 663 658 663 0.81 2 15 0.073 3.3e+03 -0.5 0.3 4 10 692 698 691 699 0.94 3 15 1.8e-07 0.0082 17.4 12.5 4 19 709 724 707 724 0.93 4 15 0.69 3.1e+04 -3.6 1.5 6 10 750 754 749 754 0.90 5 15 5.5e-08 0.0025 19.1 14.8 1 18 760 777 760 778 0.98 6 15 0.15 6.7e+03 -1.4 2.5 1 10 787 796 787 796 0.92 7 15 0.47 2.1e+04 -3.1 0.8 6 10 806 810 805 810 0.89 8 15 2.4e-06 0.11 13.8 10.9 1 18 816 833 816 834 0.93 9 15 0.00023 10 7.5 12.6 4 18 881 895 874 896 0.86 10 15 0.87 4e+04 -3.9 2.0 5 10 925 930 925 930 0.93 11 15 0.0069 3.1e+02 2.8 11.1 1 11 936 946 936 958 0.88 12 15 3.9e-11 1.8e-06 29.1 14.0 1 19 963 981 963 981 0.98 13 15 1 4.5e+04 -9.0 12.6 10 19 1028 1038 1014 1038 0.78 14 15 8.8e-08 0.004 18.4 16.9 1 18 1074 1095 1074 1099 0.91 15 15 5.3e-07 0.024 15.9 14.2 1 19 1106 1125 1106 1125 0.97
Sequence Information
- Coding Sequence
- ATGGCTACCTGGGACGGCTCTTACCCGGAGCCAGACGGTTCCAACTACTACGTCAACAGTGCCAGAGCTCACGCACCCACTGGTAATAACCTGGCCGGCTGGAACGATTACCATGACAAAATGTACGAGCACGATCCGATGAAAGGTGGTTATCAACCCATCAATCCAGGGTACTACAATCATCACAGTGCCACAACTTTTCCGGAGACCGATCTTTATGAGGATGGCTCGTTAAAAAGTGGTCTTCTGCCAATCAATCCAGGATACTACAATCATCACAATGCTACTACTTTTGCGGGGAATGATCTGTATGAGAACGGCTCGATAAATGATGGTCTTCAATCTATCAATCCAGGATACTACAATCATGAGGCTACAGCTGCTGGACCTTCTTTTTCGGTCTCTAGTATCATACCAAATGTTGCAACTAATGCCAATTCTTATGCTAACTCTGGAATGCAAGCCGTCGTGAATAAGatccATATGGGAACTCCTGAAGAAAATTTCAATGCCACTAATAATCAATTACCAtgtttttttgaagataataAGATTGCGCAACAGAATCCAACTTattattacaacaaaaattttcaaaataatggtAAATCCAAAGATGCCAATAAGAGTTTTAAAATGTCTAATATAgttgaaaattcaaatctacATGCAACTGCAAGTGAATTTATACCTAACCAAAATAAAAGGGACCGAAGCACTAATGTAAATACTAGTAAAAATAATCAGGAACGTgcgaataataattatcaaaataatgatGTAGAGCAAgtaaataatgttttctttgaagataataaaaaatataatgataaaaaatttgaaaacaagaGAGATGCTGGCAGAAGGTGGAAGGATAACTCTCAAAATGCTCAATATTATAAGGATGATAAGAAAGATTatggaaaaaatcaaaatgctaGAAAATATCAAAATGATAAGTAtgcttacaataaaaattactctGACAAACCACGTAACAATAGATCCAAAAAAGAAGATACAGAAACACTTGCTGCAGAAGCTAATATAAACAGTGAGCATGATATTCAAGATACTTTTACTAACATTGAAGTATTTAATGCCACTACTGTGGAATCAGATAACGCACAAAATTCAGGATCTCAATCAtcgaaaaatatgaaattttcaaataacagtCGCGGAGATAGGTATTATGATAGAAAAGAGCGCTATAACAACAGAGACTTTAGAGAACCTAGAGATCAAAGAGATGGCAGAAATTCTAGAGATCCTAGAGAATCAAGAGATCCCAGAGATTCTAGAAACTCAAGAGATCCAAGAGACTCAAGGGATGCTAGAGATTCAAAAGATCCTAGAGACTTTAGAGATCCAAGAGACTCAAGGGATTCAAGAGTTTCTAGAGATCCTAGAGACTCAAGAGATCCTAGAGATTTTAGAGATTCTAGAGACTCAAGAGATCCTCGAGATTATAAAGATACTTGGgacagaaaaaataattattctgatTATAATGGATATAATAATAGGAATAATTATAACAGAGACAACAAATTTGAAAGAAGGGAAAATAGGAACGGACCTGTAGATAATCGCGATAAAGAAGATTATAATGGATATAGCAGGAACAATTACAATAGAGATAATAAATTTGATCGAAGAGAAAATAGAAATGGACCTGCAGAAAATCGTGATAAAGATGTTGCTGATTGGAGGCAAAGAGCAAATGATTCAGGGAATAAAAATACTTTGCTTAAGCGTCCTTACCAGAAGAAGTATGAACCAGATGATGCTGCAGATCAAAGGGAAAGATTGACAGAACAACTTAACCGTGGTCAATTGGAGTGTTTAGTTTGTTGTGAGTCTATACGCCAGGCAGATTCTGTATGGTCTTGTTCCAATTGCTATCACGTTTTGCATTTGAAATGTGTACAAAAATGGGCCAAGTCTTCACAAGATGaaacTGGTTGGCGTTGTCCAGCGTGTCAGAACGTTACCTCAGAAGTACCCTTAGAATACAAGTGTTTCTGTGGTAAGATTCGTAGTCCCGAATGGAATCGTCGTGATATCGCTCATTCATGCGGTGAGACATGTGGACGAGCTCGTGCGGAGGCTGGATGCGTTCATCGCTGCACGCTGCTTTGTCATCCAGGGGCTTGTCCACCTTGCTCTGCTATGGTTACCAAACATTGTGGTTGTGGCCGAACCTCACGCACCCAAAAATGCAGTGCTGGTCCAATGCTCCAATGTGAAGAAATCTGCGATCGTCCACTCAACTGTGGTGTTCATAAATGCAAAAGTATATGTCACCATGGTAGTTGTGAACCTTGTGCCGATGTTGTTAAACAAGaatGTTACTGTGGAAAGCACAATCGAGAGCAAACTTGTGTGTTAGACTTACCACCAGTTTATTCCTGCGAGAATGTTTGTGAAAAATTATTGGATTGTAAAAATCATAAGTGCGCAGAGATTTGTCATCCTGATGATTGCAAACCTTGCGCTTTAAAGCCCGAGACTGTTACGCACTGTTGCTGCGGCCAAACTGCTTTGGATGTCAAAAGAGAGAGCTGTGTGGACCCTATTCCGACTTGTGATAAGATGTGTTCCAAACGGTTGAAATGTGGCCAACCAAATAGCCCACATACCTGCCAAGCAAACTGCCACGAAGCAGAGTGCCCAGAGTGTGAATTAAGTACTAAAGTCAGATGCCGTTGCGGTCATATGGACAAAGAAATTCCATGTAGGGAATTAAAAAGTAAGGCCGACGACGCACGCTGTGAAAAAAAATGCACGAAGAAGCGCTCATGTGGCAAGCACAAGTGCAATCAAATGTGTTGTATCGATATCGAGCACATTTGCCCTCTGCCGTGCTCAAAAACATTGAGCTGCGGTAGACATAAATGCGAGCAGACCTGCCATAAagGTCGATGCCAGCCATGCTGGCGTAGCAGCTTCGACGAGCTGTATTGCGAGTGCGGCGCGGCTGTGATTTATCCACCAGTACCATGTGGAACACGCCGACCCGCCTGCGACAAGCCTTGTGGTCGCGAGCATCCGTGTAGTCACGAGGTACTGCACAACTGCCACAGCGACACTAGCTGCCCTCCATGTAGCGTATTAACGCAGAAATGGTGTTACGGCAGCCACGAATTACGCAAGGCCGTTCCTTGTTACGTGAACGAGATATCCTGCGGCCTTCCTTGTGGCAAGCCACTCTCTTGTGGACGCCACAAGTGTATCCAGTTGTGCCATCCGGGCCCTTGTGATAAGCCCGGCCAGCCTTGCGTCCAGCCATGTACAGTATCCCGCGAGCTGTGTGGCCATAATTGTGCCGCTCCGTGCCACGAGGGTAAATGCCCCGACACGCCCTGCCGCGAGATGGTCAAGGTCACGTGTCAATGTGGCCATCGCACAATGACTCGCGTATGCGCAGAGAACGCACGTGATTACCAGCGCATTGCCAGTGGTATTTTGGCCAGCAAAATGGCAGATATGCAGCTTGGTCATTCGGTTGACCTTGAGGAAGTCTTTGGACAAGGAGCACGTAAGCAAAACCAGTTGAAGACGCTCGAGTGTAACGAAGAGTGCAGGGTCATCGAGCGCAATCGTCGGCTCACTCTAGGCCTGCAGATTGTTAATCCAGATCTTAGCGGCAAGCTCGTGCCCCGATATAGCGATTTTATGAAACAATGGGGTAAGAAGGATCCCGCTTTCTGTCAGATGGTGCACGATCGACTTGCCGAGCTGGTTCAGCTGGCCAAGACGTCGAAACAAAAGTCGCGTAGCTATTCATTCGAGGTCATGAATCGGGAGAAGCGACAATTTGTACATGAGTCTTGCGAGCAGTTTGGCTGTGATAGCCAGGCCTATGATCAGGAGCCCAAGCGCAATGTTGTTGCTACGGCTGTAAAGGATAAGTGTTGGTTACCAAGTTATAGTCTTATGGAAGTATTACAAAGAGAGCAAGGGCAGCGTAAGGTTCCAGGACCAATGCTTAATAAGTCAAAACTCAATATTTCTGAtagGAGTAAGGAAATTACGACGTTAAACTCAAAGAAGAGTTTAAAATCTCTGCCAACGACCTCGGTCTCGCCGCCGAAGTCACCAGAGCCTcgtatagattattttaattacaatggttga
- Protein Sequence
- MATWDGSYPEPDGSNYYVNSARAHAPTGNNLAGWNDYHDKMYEHDPMKGGYQPINPGYYNHHSATTFPETDLYEDGSLKSGLLPINPGYYNHHNATTFAGNDLYENGSINDGLQSINPGYYNHEATAAGPSFSVSSIIPNVATNANSYANSGMQAVVNKIHMGTPEENFNATNNQLPCFFEDNKIAQQNPTYYYNKNFQNNGKSKDANKSFKMSNIVENSNLHATASEFIPNQNKRDRSTNVNTSKNNQERANNNYQNNDVEQVNNVFFEDNKKYNDKKFENKRDAGRRWKDNSQNAQYYKDDKKDYGKNQNARKYQNDKYAYNKNYSDKPRNNRSKKEDTETLAAEANINSEHDIQDTFTNIEVFNATTVESDNAQNSGSQSSKNMKFSNNSRGDRYYDRKERYNNRDFREPRDQRDGRNSRDPRESRDPRDSRNSRDPRDSRDARDSKDPRDFRDPRDSRDSRVSRDPRDSRDPRDFRDSRDSRDPRDYKDTWDRKNNYSDYNGYNNRNNYNRDNKFERRENRNGPVDNRDKEDYNGYSRNNYNRDNKFDRRENRNGPAENRDKDVADWRQRANDSGNKNTLLKRPYQKKYEPDDAADQRERLTEQLNRGQLECLVCCESIRQADSVWSCSNCYHVLHLKCVQKWAKSSQDETGWRCPACQNVTSEVPLEYKCFCGKIRSPEWNRRDIAHSCGETCGRARAEAGCVHRCTLLCHPGACPPCSAMVTKHCGCGRTSRTQKCSAGPMLQCEEICDRPLNCGVHKCKSICHHGSCEPCADVVKQECYCGKHNREQTCVLDLPPVYSCENVCEKLLDCKNHKCAEICHPDDCKPCALKPETVTHCCCGQTALDVKRESCVDPIPTCDKMCSKRLKCGQPNSPHTCQANCHEAECPECELSTKVRCRCGHMDKEIPCRELKSKADDARCEKKCTKKRSCGKHKCNQMCCIDIEHICPLPCSKTLSCGRHKCEQTCHKGRCQPCWRSSFDELYCECGAAVIYPPVPCGTRRPACDKPCGREHPCSHEVLHNCHSDTSCPPCSVLTQKWCYGSHELRKAVPCYVNEISCGLPCGKPLSCGRHKCIQLCHPGPCDKPGQPCVQPCTVSRELCGHNCAAPCHEGKCPDTPCREMVKVTCQCGHRTMTRVCAENARDYQRIASGILASKMADMQLGHSVDLEEVFGQGARKQNQLKTLECNEECRVIERNRRLTLGLQIVNPDLSGKLVPRYSDFMKQWGKKDPAFCQMVHDRLAELVQLAKTSKQKSRSYSFEVMNREKRQFVHESCEQFGCDSQAYDQEPKRNVVATAVKDKCWLPSYSLMEVLQREQGQRKVPGPMLNKSKLNISDRSKEITTLNSKKSLKSLPTTSVSPPKSPEPRIDYFNYNG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -