Basic Information

Insect: Leptomastidea abnormis
Gene Symbol: RREB1
Assembly: GCA_030522805.1
Location: JAPYZE010000444.1:25560-35811[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.011 2 10.3 0.8 1 23 55 77 55 78 0.94

2 15 0.00038 0.067 15.0 0.1 1 23 107 129 107 129 0.97

3 15 2.7e-07 4.7e-05 24.9 1.3 1 23 135 158 135 158 0.98

4 15 0.044 7.8 8.4 0.1 1 23 264 288 264 288 0.96

5 15 0.59 1e+02 4.9 0.6 1 19 336 354 336 356 0.91

6 15 0.075 13 7.7 0.2 1 23 496 518 496 518 0.97

7 15 0.00095 0.17 13.7 0.2 1 23 527 549 527 549 0.98

8 15 0.0014 0.25 13.1 2.8 1 23 555 578 555 578 0.97

9 15 0.0078 1.4 10.8 2.1 1 23 986 1009 986 1009 0.96

10 15 0.00057 0.1 14.4 0.1 3 23 1313 1333 1311 1333 0.97

11 15 0.02 3.5 9.6 5.1 1 23 1339 1362 1339 1362 0.97

12 15 0.012 2 10.3 2.8 1 23 1407 1431 1407 1431 0.97

13 15 1.8 3.2e+02 3.4 3.0 1 23 1574 1597 1574 1597 0.95

14 15 0.029 5.2 9.0 0.7 3 23 1641 1661 1640 1661 0.93

15 15 0.009 1.6 10.6 4.2 1 23 1667 1689 1667 1689 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.011	2	10.3	0.8	1	23	55	77	55	78	0.94
2	15	0.00038	0.067	15.0	0.1	1	23	107	129	107	129	0.97
3	15	2.7e-07	4.7e-05	24.9	1.3	1	23	135	158	135	158	0.98
4	15	0.044	7.8	8.4	0.1	1	23	264	288	264	288	0.96
5	15	0.59	1e+02	4.9	0.6	1	19	336	354	336	356	0.91
6	15	0.075	13	7.7	0.2	1	23	496	518	496	518	0.97
7	15	0.00095	0.17	13.7	0.2	1	23	527	549	527	549	0.98
8	15	0.0014	0.25	13.1	2.8	1	23	555	578	555	578	0.97
9	15	0.0078	1.4	10.8	2.1	1	23	986	1009	986	1009	0.96
10	15	0.00057	0.1	14.4	0.1	3	23	1313	1333	1311	1333	0.97
11	15	0.02	3.5	9.6	5.1	1	23	1339	1362	1339	1362	0.97
12	15	0.012	2	10.3	2.8	1	23	1407	1431	1407	1431	0.97
13	15	1.8	3.2e+02	3.4	3.0	1	23	1574	1597	1574	1597	0.95
14	15	0.029	5.2	9.0	0.7	3	23	1641	1661	1640	1661	0.93
15	15	0.009	1.6	10.6	4.2	1	23	1667	1689	1667	1689	0.99

Sequence Information

Coding Sequence: ATGGGATTGGATAAAAGGGTACCGGTTTACAAagTGACCGCGGAAACTGGTCCCGATCATCGTGACAGCTGCGGCGAGAGTCAAACGGATGTTGCATCACCATTGCTCCACAAACGTTTCAAATACAAAAGTGCAGATCCACCAATCGAAGGTATAATAAGTCACCCGTGTCCAGCCTGTCCATTAACACTACCAACAACTCGAGAATTAACTCAACACTTACGTTCACATCACAATACCCCAAGATCAATAAATCAAACAAATCAATCAATAACGGGTGGCACATCGGACGGTGGTAGTGGTCCAGAGGACGCAGATTACGCTTGCGGCGTCTGTCACAAAGTACTAAGTTCAGCAAGTTCACTCGATCGTCACGTATTGGTACATTCCGGTGAACGACCATTTAAGTGTAAATACTGCGATATGGCATTCACGACAAATGGTAATATGAACAGACATTTACGTACCGCACATCGTTCATTATCACCTGGTACATTAAATGCATCAGCTGGTTGCAGTACGTCGGAATCTGACGAAGCTGGTAGTAGTGATTCTGAAGCTAGACCATTGAGTCGAGCTATTCAGGATGAGTATAACAACAACGAGATTAAGAAGAGAGTTGGTTCACCGAATATTACACAGAGTGATGGACAACAGGCTGAGAAGAAACGTAAACGTCAGAGATACGAGGCGAATGATGAAGATAACGAAGAGGATGCGGATGACGAAGGTAGAGAATCATCTCAGCAACGAAGACGATTACAGTTGGGACGAGGTGTTGAATTAAGCTACAGCTGTGAATTGTGTGGTCGAAGGGACTTTGTCTCAGCAGAGATGCTGGAAGCACACAGGTTTACAGCACACGGTTTAGCTGGTGCTCGAAATTCTGTCGTTGGCTTTGGTGATCTCACCTTTACCGATTTCTCATCTGGAAAATTCCCAGCTATAGCAAGAATGGCATGCGAACAGTCGCTGCATCGACCTGCATCTGGTGAAGCAGCTAGATTTCAGTGTCGTAAATGTACTCGAGCATTTCCCTGTCAATCAGCACTTGACGCTCACGAATTGGATTGCGGCCAAAGGCGGATTACTAATCAACAATTACTACAGCGACCACTATCACCTCATCATCAACAACAGATGCATCAACAGATTCATCATCCGCAAGCACCACTGCATCAGCATGACAGTCGTTTGGGAAGAGATGACTTTTTTGCTGGCCTAGATCTGCAGAATAAAGCTGCATTGGCTGAAGCAAGGGAAGGTAAAGATCTCGCTGATATTCAGAGTATTATATCCCTGACTTCGCGATCCAGCATCCTTCAGAATATATCTCGAGCTGAAGCCAGCACACCTGATAACTGTCCTGTACGTCAAGCTTTTGGTTCATCTGGTTCATCCAGCACTCCGTCATCCGAGTGTCACGAGGAAGAAGCTCAGGATGATTTTGCAGCTGAATTTAGAAAGATGAAACTTAAAGGTGAATTCCCATGTAGACTCTGCTCGATGATATTTCCGAATTTGAGGGCACTCAAGGGCCACAATCGTAATCACATAAATGTGGCTCAAGGAATGCCATTCCCATGCAACATATGCACCTATACAGCTGTTGACAAGGCAACTCTACTCAAGCATTTAAAGTCGCACAACGGGGCAAGACCCTACGAGTGTTCGCTTTGCAATTACGCCTTCACGACCAAGGCCAATTGTGAACGACATGTGCGCAATCGGCATGGTAAATTATCTCGTGACGAGATCAAAAGTGTACTGATCTATCATCCGAGTGAGGATAACGATGCTACCAATGAGGTTTGCTCACCAAGAGCTACAAATACTGGTCTGTTGGTAAGAGACGAGGTACGTAAGGCATTGGTTTATCCAAGTGACGAACCTGCACAGCCTTCACCTTCTCAGACTCAGTTGAAACCTCAATCGTCGCATCATTACTCTGGTGAAGGTATAAGAGTAAAGGACAGCTCGCAGCTTGGCTACCGATACGACAAGCTTGATGCTTTTCAACGAGCAGctacgacaacaacaacaacaagtggCCAACCACTTGAATTGACCTATCGTACCGAAGATCTACCAAAGTCACAGATGAAACAAGAGGAGGACGACGATGCTGATTCACGATCATCCGAAGACGAGCTAACACTAGTCAATGATACCAAAACCAACGACGCACACCAAAGAAGTAGCCAACCCATCGATTTGAAGAAATCCAACGGTGAAGAGAGAAATGGTGCTAATGATGCCCCCTTAGATCTAACTGTTGATGTGCTGGATCTTAGTAAGAaggcttctgctgctgctgaagctGCTGCTGTAGCAGCTGCAACaacttcatcatcatcagcagcaacagtcaAACCAGAGAAAGAAGAGACTGTAGATACGACTGCAGAGGATTTGAGTGCTAGACATCGTGCCGAAGAGTTATATAACACACGTAATCAACTCCTCCTCACCCAGGCGTACCTCAAAGCCAACCAACTGACTGCACAACCAGCCCTGCTTGAGAGTTTATACTCCAGTGCTCAAATGTCTTACCCAAACTTTGCTGGTTTCCCAGGTGCCGCAGGTCTACTCCAACCTTTTAGTCTCTTCAGCCAGCATCTATTCACCCATCCAGAAATGAACAATCCGCTTTACAAAGAATTAGTACGTGGACTTCGTACAAGTGGTGGTAGTCTAGTAGAAGGTCCAACTGGTCCAGCAAGTTACCctcagcaagcagcagcagctgcaacaACAAATCACATAGAAGAATACGCTCGTAGTGCCAGCACAAATTCAACGTCTCGACTACTTAACAAATCAAGTCAACCTCAACGCGAACGCGTACCTCAAACCGTAGGTGCTTCAAGTGGTGCTGCATCAGCTAAGCTGGTAATGAAAAATGGTATGCTAATGCCAAAGCAAAAGCAAAGACGTTACAGAACTGAACGACCCTTCAGCTGCGAGCATTGCGCTGCCAAGTTCACCCTGCGCAGCAACATGGAACGACACGTCAAACAACAGCATCCCCAGCATTGGTCTCAAAAGCCACGAGGTGCTCATTCAGCCCGAGGACGACCACCAGCGAATCCACCGACTCTATTGCAAAGTCTGAGGCAACCACATCAACCACATAGTCTTCGACAACGGCCTTACGATCCTTATCCTCAAGCGCAAGCTCAACCGAGAGTAGCGAGTGAAGCCCAGCAACAACAGTCTGGACGACATGCGATTTCCGATCAGGTGAAGTACGCGATTTTAGCGCAGCAACTCAAAGCTATCAAGCCTGACGAGGCAGATATGGGAGCGGAGTTGGTGATAGATGAGGAAGCTACTGCTCGAAGTAAGGAAAATGCAGCTGCGAGTCAAGCTCCGGTGATGAGTTTGCTTAGGGGTAAGCTGGAAGCGAGTGCAGAAGCTGATGAGACGATGGAACACGATAAAGGACGAGCAGATAATGTCAAACGTTTATTGAATTCCGAGCGAGAGATGGAAGCTGAACGCAGGaatgaagaagatgaagatgataaGATGAGCGTTGATGAAGATGAGGACGATGAGGATGAAGATGATGACGAGGAGGATATTAATGAGAAAAGGAGTTTAAATAAGCGAACGATCGATCCGATGATGCTGGTGAAAACCGAGCTGAACACCATGGAAGTAAAACGAGAAAGCGGAGAGAATGAAGATCTTGCAAGTGTTTCGGAAATTTTAGACAACGCATCGCAAAATTATCAGAATCAATTTCAATCACAGTACATGAGCGACGAGGAAGGATTAATTGGTTCGATGAGCGATTGTAATCAATCGGGTAGCGATGAAAAATCCGATTCTGTTAACTCGGCAACATCAAGTACACCAACATTTAAAAAGAAGcgaatgaagaaaaagaagaagaaatcagCATACTCATTAGCACCAAATCGAGTAATTTGTCCATACTGTCAACGACCATTCCCTTGGACGTCATCATTAAGACGTCACATATTAACGCACACCGGTCAAAAACCATACCGATGTCCTTACTGTACCCTCTATTTCACCACAAAATCAAACTGCGATCGTCACCTGCTGAGAAAACACAAGAGCCAAGTACTTAAACTCGAACGAGCAGCAAGTGTATCATCACCAGAACCACAAGAACAATCATCATCTGGAGGTACATCAACCACAGGACGGGCACATTTTTCAATGCGCAATGTACCAGAACGACCATTCAAATGTAATAAATGTCCTAGCTCGACTTTTTCAACCTTAGGTAATCTCAAGAAGCACAAATCAACAAAGCACGGTAGTCACTCGGGTCATTCAGGTCACTCAGGCAACTCTGGATCTGAATCAGCTTCAAGCGAACCTCAGCACAGTCCATCAGATTGCCCAGGACCCAACGGTCATCAAGATCAAGATCACGATAGTCCTCAagatcatcatgatcatcaatCTCAACTTAAACACAACGAGCAACATAACAGCGGTTACGAGAGTCAATCGTCAGGTGTCTCAGACGTATCTCCAGATCCACTACCCAGTCAGGAAGTAAATTCTCATCCCAACGCCTCACCATCATCATCCCCAACATCCGCAAACAATATCTCTGCAACCTCGTCGTTAAACGGCGAACAGCAGCTGGTCGCTcaagctgcagctgcagcagctagGAATAAATCATCACCTCAAACGTCACCCGGACCACAGATAATGGCTGGTGAAACACCTTTCAAGTGCCACATGTGCGACAGTGGATTCGCTGAGCGACAGGACTGTCTTGATCATCTTAGGATCTATCACGAGGAGGCTTATGATCGTCTTGTGGCACGAGGTGCTTTGGAGAAGGATTATGATGGTAATGATCCAAGCGATGTCGAGGATGTTTCCAAGAGGGTTCGCGTTACCGACTACAGTAATCGCAAGGTCATCTGTGTCTTCTGTATGCGTCGTTTCTGGTCAGCCGAAGATCTACGTCGTCACATGCGCACCCACACCGGTGAACGTCCCTACACCTGCGACATATGCGCTCAACGTTTCACCTTGAAACACAGTATGCTGCGACATCGCAAAAAACACGACTCTCCGGACTCTGCCATGTACGTGGGTACAAGCGGTGACGAGGACAGTATCGCTGGTACCACAAGTTTAAATCAACAGCAActctcaacaacaacaacaacgtcaCGAACAAATCAGCAGCAAGCGGTAGCGGTAAATTCGAGTTCCTCGTCCACGAGTGGTAATTCGCCAGCGGCGACGACAACTTCTTCGACGACGCGTAGATTATCGCTGCCACAAGTCGCGAGTGTAGCTACCGCGGATGCCGCACCAAGTGGTCTCATGCGACCTTATGAGAATGGCCTAGCTGCGCTTGGTGGAAGATTGGAAACGGGTCAGGAGGGTAACGAGCATCAAAGCAGCGATCTCATATCGAATTTACTTGGTATTGGTGATAATATCATCGATAGAGCACTGCAATCATCGGTTGACGATGCAGCTAAATTACTTGGTATCAAGGAAAATCAAGAGTga
Protein Sequence: MGLDKRVPVYKVTAETGPDHRDSCGESQTDVASPLLHKRFKYKSADPPIEGIISHPCPACPLTLPTTRELTQHLRSHHNTPRSINQTNQSITGGTSDGGSGPEDADYACGVCHKVLSSASSLDRHVLVHSGERPFKCKYCDMAFTTNGNMNRHLRTAHRSLSPGTLNASAGCSTSESDEAGSSDSEARPLSRAIQDEYNNNEIKKRVGSPNITQSDGQQAEKKRKRQRYEANDEDNEEDADDEGRESSQQRRRLQLGRGVELSYSCELCGRRDFVSAEMLEAHRFTAHGLAGARNSVVGFGDLTFTDFSSGKFPAIARMACEQSLHRPASGEAARFQCRKCTRAFPCQSALDAHELDCGQRRITNQQLLQRPLSPHHQQQMHQQIHHPQAPLHQHDSRLGRDDFFAGLDLQNKAALAEAREGKDLADIQSIISLTSRSSILQNISRAEASTPDNCPVRQAFGSSGSSSTPSSECHEEEAQDDFAAEFRKMKLKGEFPCRLCSMIFPNLRALKGHNRNHINVAQGMPFPCNICTYTAVDKATLLKHLKSHNGARPYECSLCNYAFTTKANCERHVRNRHGKLSRDEIKSVLIYHPSEDNDATNEVCSPRATNTGLLVRDEVRKALVYPSDEPAQPSPSQTQLKPQSSHHYSGEGIRVKDSSQLGYRYDKLDAFQRAATTTTTTSGQPLELTYRTEDLPKSQMKQEEDDDADSRSSEDELTLVNDTKTNDAHQRSSQPIDLKKSNGEERNGANDAPLDLTVDVLDLSKKASAAAEAAAVAAATTSSSSAATVKPEKEETVDTTAEDLSARHRAEELYNTRNQLLLTQAYLKANQLTAQPALLESLYSSAQMSYPNFAGFPGAAGLLQPFSLFSQHLFTHPEMNNPLYKELVRGLRTSGGSLVEGPTGPASYPQQAAAAATTNHIEEYARSASTNSTSRLLNKSSQPQRERVPQTVGASSGAASAKLVMKNGMLMPKQKQRRYRTERPFSCEHCAAKFTLRSNMERHVKQQHPQHWSQKPRGAHSARGRPPANPPTLLQSLRQPHQPHSLRQRPYDPYPQAQAQPRVASEAQQQQSGRHAISDQVKYAILAQQLKAIKPDEADMGAELVIDEEATARSKENAAASQAPVMSLLRGKLEASAEADETMEHDKGRADNVKRLLNSEREMEAERRNEEDEDDKMSVDEDEDDEDEDDDEEDINEKRSLNKRTIDPMMLVKTELNTMEVKRESGENEDLASVSEILDNASQNYQNQFQSQYMSDEEGLIGSMSDCNQSGSDEKSDSVNSATSSTPTFKKKRMKKKKKKSAYSLAPNRVICPYCQRPFPWTSSLRRHILTHTGQKPYRCPYCTLYFTTKSNCDRHLLRKHKSQVLKLERAASVSSPEPQEQSSSGGTSTTGRAHFSMRNVPERPFKCNKCPSSTFSTLGNLKKHKSTKHGSHSGHSGHSGNSGSESASSEPQHSPSDCPGPNGHQDQDHDSPQDHHDHQSQLKHNEQHNSGYESQSSGVSDVSPDPLPSQEVNSHPNASPSSSPTSANNISATSSLNGEQQLVAQAAAAAARNKSSPQTSPGPQIMAGETPFKCHMCDSGFAERQDCLDHLRIYHEEAYDRLVARGALEKDYDGNDPSDVEDVSKRVRVTDYSNRKVICVFCMRRFWSAEDLRRHMRTHTGERPYTCDICAQRFTLKHSMLRHRKKHDSPDSAMYVGTSGDEDSIAGTTSLNQQQLSTTTTTSRTNQQQAVAVNSSSSSTSGNSPAATTTSSTTRRLSLPQVASVATADAAPSGLMRPYENGLAALGGRLETGQEGNEHQSSDLISNLLGIGDNIIDRALQSSVDDAAKLLGIKENQE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -