Basic Information

Gene Symbol
ZFX
Assembly
GCA_030522805.1
Location
JAPYZE010003066.1:7260-12461[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 2.2 3.8e+02 3.1 0.1 3 23 36 56 35 56 0.94
2 15 1.3 2.4e+02 3.8 2.6 1 20 1081 1100 1081 1104 0.76
3 15 0.0021 0.36 12.6 3.0 2 23 1197 1219 1196 1219 0.97
4 15 0.00032 0.056 15.2 0.4 2 23 1232 1253 1231 1253 0.97
5 15 2.9e-05 0.0051 18.5 2.4 2 23 1256 1277 1255 1277 0.97
6 15 0.031 5.4 8.9 1.9 1 23 1283 1305 1283 1305 0.95
7 15 3.2e-05 0.0057 18.3 4.5 2 23 1312 1333 1311 1334 0.95
8 15 0.14 25 6.8 3.7 5 23 1347 1365 1346 1365 0.97
9 15 2.9e-05 0.0051 18.5 1.5 3 23 1372 1393 1371 1393 0.97
10 15 0.013 2.3 10.1 0.3 2 23 1409 1429 1408 1429 0.97
11 15 4.7e-05 0.0084 17.8 1.2 1 20 1435 1454 1435 1457 0.92
12 15 0.00011 0.019 16.7 2.7 1 23 1465 1487 1465 1487 0.99
13 15 0.0031 0.54 12.1 3.2 1 23 1493 1515 1493 1515 0.97
14 15 3e-06 0.00053 21.6 3.8 1 23 1521 1543 1521 1543 0.99
15 15 0.0004 0.07 14.9 7.2 1 23 1549 1571 1549 1572 0.96

Sequence Information

Coding Sequence
ATGGATCTCAGTACATCTGTAAGTTCGATGTCAGGCGGAGCCGCGGCTTCGGCTTCGCCTGCCAGTAGCGGCAGTCCTAGCGGCAGCAGTGGGGGCGCGGTGGCCTGCCCTGTCTGTACGCTCTATCTGCGCGAAGGCATTAGCCTGCAGAAACACTTGGACACTCATCCAAAGGAGCAGGTGATAGAGGCGTTAATCCGGGCCAGTGCGGCTGGTGGTCCGTCAGTCGTGCTCGCCAGTCAGTTCCCCACCTCGCCGAGCCCCCAGCCAGCAGCTCCCGTCCAGACGCCGACGTCGCAGCCGATGGCTCCGGTGACGGGGAGCACACAGCAGTCCCAACCGGCCCCGGCTTCGCCTAGCCCACATCACGTTCCTCACGCTCAGTCGCCCTATCCGATTGGGCCTATCTTCGAGTGTCCGACACAGATTAACGCCATGATACCGCCACCACAGTTTGCCTCATTCAGCTATCAGCAGTTTGTTAACAATGGTACGATGATGATACCGGCGCAGTATGCGATGGCACAAGCACAGGCGCCGCCCACGAGCCAGATGATGCAGATGCTGTACAGCCCGTACGGCATGTATCATCAGCAGCAGATTCCAACGGTGCAGATGATATCAGCACCAGCACCTCCGCCACCATTACCACCCCAGGCGATGATGCCTAGTACGACGGCACCGTTACCAGTGGCGAGTACTGTGGCTGCGGCGACGACGCGCATGAGGCCGGCTATCGTTGCAGCAACGCCGACAAGCGTTCCGAATCATGCAATAACAGCTAGCGTAAACGAGAATTCGACTGTAACGATGACGACAACTTCCTCGCCACCCAGACCGACCATGTGCGCACCCGAGCCACCTCTAACGCAAATGCAGCAAACGCCACCATCGTCGTCCCAGCATCAACAAGCGCaatcacaacaacaacatcaacaccAGCATCAGCAGGAATCTATGATTGTTGATCAGTCCAAAGAAGGAGAGACAGAACAAAGTATTGTTGAGAAAACGATACCTGGACCCGACCGCATACTGCCTGATCTTGTAATACCTGAGTCGCCTGAGCAGGTGCAAGACGAGCAGGAAGATGAACTGAATAGGTCACATTCTGACCAGAGTGAACAGTCACAAAATGATTGTGATCAGGATGAGCAAAGCCATGACGTTGGACAATATCACAGAGAGGATCAACCAACGTTAACTAGTAACTCTTGCGAAGAAGTTACTGACGATGATAAGACTGAAAGAATCCTACCGGATATTGAAGATAATGAAGAAATCGAATCGTTGATTGTACGGACGCCCATTAAGGTAGAAAGTCACAAAAGTAATGATAGAATGGAAGTGACTGAGTCTGTTCAACCTACGGAAATCCAGATTGCTGATAGAGCAACGGAAAAAGAATTTGTAGAAAATATTCACTGTAATGAAATTCACTCTGATAAAGAATTGGATGATAAATCCGAAGATGTACAAATCATTGAGGAAGCAGTGAAGTCTCAAAATACCAGTCCCATTAACTCTCGAACTTCCTCAGCTAACAAACCAGAAAATGAACAAATGAATAGATTATTAGATAATATGGAATCGGAATTAAGTAATATTGACTTGTCGAGTAAAGAACATGACAACGAGAATAATTGTCAATCTATGGAAACAGAACAAAATTCTATGAATACATCGGATCCCCTAGAAAAACAAGCTGACGAAGATGAGGCGACAAACACctcatatcataaaaatattcataagtCAATAGAATGTAAGATTATTGTCTCACATGAGGATACAGACGTATCATCTGTGGCTTCGTCAGACGACGGCCTCATCAATGACGATATGGAAACCCAGAAGATGATGTTgacaaaaacattttatcaatataagtaCTCGCAATCGGCACCTAATTCACCCGCCAACAAAAAGAAGTTTAGGCGCCCAATATCGCAGTCTTCGCTTCCCTTAGATTTAGACGAGAAGCTTATAAGAGACGGCTCAAACGAGAACGTCTGTCAGTACCCGGAGGGCTTCGAAGCTACGTCATTTAATGACATACTCAAGGATAACTATAACGATGAAGATATGGATCTAGAAGAGGAACAAAATCACTCTTATCTTAAGAAAAATGATGGCATTATACAAAGAACAATCTCTCGTGTAACGTTATCAAGTGATGTTTGTATGCTCAAGTCCCGGCGTTCTAATAGACGTGCCTCGCCCGTATCCGTACGCTCATCGTCGCCGTACTGTCAGATAGAggatgaggaagaggaagaggatgaAGACTCAGACGACGCCGATAGTATGGCTAGTGACCAGTCAAATGATAAGgacgaagacgacgaggaagaagaagaagaggaagaggaagacgaTGATGATCATTTGTTGATGAGTGTGGCGACGCAGCGGAGGCTCGAACACGAGGatcgtaaaaacaaaaaagaaacggTTCAAACCAAAATTTGCACGACCATGACAGCCACAACAATTGGgcatcaacaacagcagcagcaacaatctACAGACTTTCGATCTCAGAGCCTCATGACTGAACATTACTCGACTAGTAAATTTTCCACCCTTAGCCACCACAGTACATCTCATCAGCAGCAACATATACCTGTACATCATCACGAGACGTATCCACTCTCAAATAGCAATACTTCGCAGAACTTGCTTAATATGTCTGAATGCGTAGATCCGACTACGAGTATAGACTCAAAAAGTTACAACTCAAGCTCCCCCAAGTCGAATATCGTTCCAAAACCCTCGTCTACCGAGTTGCTAAACATCAATGAAGATGCTCATGCTGGACCTATAAACGTCTTTGAGTTCGACGGTCTACAGATACTCGTACCCAGCACTTTTATCAGCGAATCGTCACAAAAGGCCGTAAGTGGTACTAGCCAGCAGTCAATGTCTAGCAGTGAAAATGACGCAGGCAACGATGAAGAAGTCAAAAGTGTCAATATGAGAGCCGACGAGACGATGCCAGCTAGAGGAGAATTATCTGAACAAGAGAGCAATGGATGCACTGAACAGGGAGCTTGGCagttatatatgACTCAAGATTCATCTCGTATGTCATCCTACGATTTGATGGCTCGTGAGAGCTGGGAAGAGTCGGAGGGTTCGGAGCACGAAGACAATAATAGTGGACAACTTATTGACAGTCGATTTATCACATCAAGTCTGTTTCTCGATCGCGATCGAAAAACACCAACTCGTCGCATCTTCAAGTGTTCCCATTGTCCTGAGGTATTTGAGTGCCCGAAAGAGCGACGCGTGCACAGTACTATGGTACACAAAGAGGCTGGACCATCGAGCTGTAGTAACGATAATGCTGATCAACCCGAGCTCAAAGAAATCAAGCTGCTCGAAGGTCGTACCAATGGCTTTGACGACATTTTTGTGCCCAGTGCATTACATTTGGCCCAACAGGCATATCAACAGCAACActtacagcaacagcagcctctGCTTCACCAGATGCAACCACCTCAGCAGCATCCTGGCTCTGCTAAGACCGAAACTGACGTTAAGTTAGCTGATGGACTCCACCTCGCTGTCGCAACTCAGGTCACCTGCAGTCTGTGCAGCCAACGTTTCAGTAGCGAGAAAACGCTGCAGATTCATCACAGACGCATGCACATAACAGAGCCGATTAAACGTATACGTGAGAACACCAAATGCCAGATTTGCAATGAGGAGTTCACTTCGGTCGCTAATTTTAACCTTCATCTGAAGATTCATCCGCTCGAATGTGGTACATGCGGCAAGTATTTTTATCGCAAGCAGAACTTCAAACTCCATATGAAGCGGCACTTGGGTATTAAGCCGTTCCCCTGTAGCCATTGCAACAAAGCCTTCCTCacaaaacaaaaacttgacGAGCACACGAACGGCCACACTGGCAATGCGCCTGTCAAGTGCAACCTCTGCAACGAGACCTTCCGTCGCTACTCAAATCTCACTCAGCACAAAAATCGACATCACCTCAACattaagaaaaaactaaagGACTACATCTGCCACTGTGGCGAAGTCTTCCACACGAAGAAAAAGCTTGCCTGGCATAAGGAAACGCATGACGAGAAGCCCAAAGCATGTACCTATTGCAACGAGCGTTTCATCCACATGGCTAGCTTAACACGACATATGCGACGTGCTCATAATCGACGTTTTGTGCCTGATGCTCAGCGCGAAAGTGAAAACGTAGAGTGTCCAATTTGCAAGTGTATATACCTACGCTCCTCATTAGCCGTGCACATGCGCGTCCACAACGGTGAGCGCCCGTATGAGTGCCAGGTCTGCTCCAAGTCTTTCAGCACCAAGTGGAATCTTCAACTGCACAAGTGGACTCACGCGGCACGCAGCACTAAACCCTTCAAATGTAATCAGTGTAGCGCCGCCTTCTACCGTCATAGCGATTACACAGCTCATATGAACTCCCATCGTAATGTACGGCCATACACCTGCAATTACTGTGGTGCTCAGTTTATTCGCAAGTATAATTGTTTGCGTCACGTTAAAGAGCACGAGGAAAATAAGGCGTATACCTGCGAGATTTGTAATAAGACCTTCCATCGATCATATTATCTCAAGGAACATTTGCGCGTGCATTCGGGTGCTCGACCTTATACTTGCCACATTTGCGGCAAATCCAGCAGCACAAAGTCCAATCATAACAAACACGTCAGGATTCATCATGCACGCGAGCCTGTAAATACTGAGAATTAA
Protein Sequence
MDLSTSVSSMSGGAAASASPASSGSPSGSSGGAVACPVCTLYLREGISLQKHLDTHPKEQVIEALIRASAAGGPSVVLASQFPTSPSPQPAAPVQTPTSQPMAPVTGSTQQSQPAPASPSPHHVPHAQSPYPIGPIFECPTQINAMIPPPQFASFSYQQFVNNGTMMIPAQYAMAQAQAPPTSQMMQMLYSPYGMYHQQQIPTVQMISAPAPPPPLPPQAMMPSTTAPLPVASTVAAATTRMRPAIVAATPTSVPNHAITASVNENSTVTMTTTSSPPRPTMCAPEPPLTQMQQTPPSSSQHQQAQSQQQHQHQHQQESMIVDQSKEGETEQSIVEKTIPGPDRILPDLVIPESPEQVQDEQEDELNRSHSDQSEQSQNDCDQDEQSHDVGQYHREDQPTLTSNSCEEVTDDDKTERILPDIEDNEEIESLIVRTPIKVESHKSNDRMEVTESVQPTEIQIADRATEKEFVENIHCNEIHSDKELDDKSEDVQIIEEAVKSQNTSPINSRTSSANKPENEQMNRLLDNMESELSNIDLSSKEHDNENNCQSMETEQNSMNTSDPLEKQADEDEATNTSYHKNIHKSIECKIIVSHEDTDVSSVASSDDGLINDDMETQKMMLTKTFYQYKYSQSAPNSPANKKKFRRPISQSSLPLDLDEKLIRDGSNENVCQYPEGFEATSFNDILKDNYNDEDMDLEEEQNHSYLKKNDGIIQRTISRVTLSSDVCMLKSRRSNRRASPVSVRSSSPYCQIEDEEEEEDEDSDDADSMASDQSNDKDEDDEEEEEEEEEDDDDHLLMSVATQRRLEHEDRKNKKETVQTKICTTMTATTIGHQQQQQQQSTDFRSQSLMTEHYSTSKFSTLSHHSTSHQQQHIPVHHHETYPLSNSNTSQNLLNMSECVDPTTSIDSKSYNSSSPKSNIVPKPSSTELLNINEDAHAGPINVFEFDGLQILVPSTFISESSQKAVSGTSQQSMSSSENDAGNDEEVKSVNMRADETMPARGELSEQESNGCTEQGAWQLYMTQDSSRMSSYDLMARESWEESEGSEHEDNNSGQLIDSRFITSSLFLDRDRKTPTRRIFKCSHCPEVFECPKERRVHSTMVHKEAGPSSCSNDNADQPELKEIKLLEGRTNGFDDIFVPSALHLAQQAYQQQHLQQQQPLLHQMQPPQQHPGSAKTETDVKLADGLHLAVATQVTCSLCSQRFSSEKTLQIHHRRMHITEPIKRIRENTKCQICNEEFTSVANFNLHLKIHPLECGTCGKYFYRKQNFKLHMKRHLGIKPFPCSHCNKAFLTKQKLDEHTNGHTGNAPVKCNLCNETFRRYSNLTQHKNRHHLNIKKKLKDYICHCGEVFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNRRFVPDAQRESENVECPICKCIYLRSSLAVHMRVHNGERPYECQVCSKSFSTKWNLQLHKWTHAARSTKPFKCNQCSAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKAYTCEICNKTFHRSYYLKEHLRVHSGARPYTCHICGKSSSTKSNHNKHVRIHHAREPVNTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-