Basic Information

Insect: Leptomastidea abnormis
Gene Symbol: -
Assembly: GCA_030522805.1
Location: JAPYZE010001350.1:26076-30402[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.055 9.8 8.1 2.2 2 23 301 322 300 322 0.96

2 15 4.7e-05 0.0083 17.8 5.0 1 23 457 479 457 479 0.98

3 15 0.0013 0.23 13.3 0.3 2 21 493 512 492 516 0.91

4 15 0.0027 0.48 12.3 1.7 2 23 602 623 601 623 0.94

5 15 5.8e-05 0.01 17.5 3.5 1 23 658 680 658 680 0.97

6 15 0.00034 0.06 15.1 1.1 1 20 685 704 685 706 0.95

7 15 0.011 1.9 10.4 0.4 2 23 717 738 717 738 0.96

8 15 2.1e-05 0.0037 18.9 0.8 2 23 774 795 773 795 0.97

9 15 6.2e-05 0.011 17.4 2.0 1 23 800 822 800 822 0.95

10 15 6.4e-05 0.011 17.4 2.2 1 23 828 850 828 850 0.98

11 15 7.7e-06 0.0014 20.3 0.4 1 23 868 890 868 890 0.95

12 15 6.5e-07 0.00012 23.6 0.6 1 23 896 918 896 918 0.98

13 15 1.9e-05 0.0034 19.0 0.8 1 23 924 946 924 946 0.97

14 15 0.00015 0.026 16.3 4.1 1 23 952 974 952 974 0.96

15 15 0.01 1.8 10.4 0.4 1 20 980 999 980 1001 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.055	9.8	8.1	2.2	2	23	301	322	300	322	0.96
2	15	4.7e-05	0.0083	17.8	5.0	1	23	457	479	457	479	0.98
3	15	0.0013	0.23	13.3	0.3	2	21	493	512	492	516	0.91
4	15	0.0027	0.48	12.3	1.7	2	23	602	623	601	623	0.94
5	15	5.8e-05	0.01	17.5	3.5	1	23	658	680	658	680	0.97
6	15	0.00034	0.06	15.1	1.1	1	20	685	704	685	706	0.95
7	15	0.011	1.9	10.4	0.4	2	23	717	738	717	738	0.96
8	15	2.1e-05	0.0037	18.9	0.8	2	23	774	795	773	795	0.97
9	15	6.2e-05	0.011	17.4	2.0	1	23	800	822	800	822	0.95
10	15	6.4e-05	0.011	17.4	2.2	1	23	828	850	828	850	0.98
11	15	7.7e-06	0.0014	20.3	0.4	1	23	868	890	868	890	0.95
12	15	6.5e-07	0.00012	23.6	0.6	1	23	896	918	896	918	0.98
13	15	1.9e-05	0.0034	19.0	0.8	1	23	924	946	924	946	0.97
14	15	0.00015	0.026	16.3	4.1	1	23	952	974	952	974	0.96
15	15	0.01	1.8	10.4	0.4	1	20	980	999	980	1001	0.89

Sequence Information

Coding Sequence: ATGGATATCTGTCGCGTTTGTCTACTTTGCACCGACTCTATGCGTGGCATATTCCACCAGGATGACATACCCTCGCTTGCTAACAAACTTATGTTACTCGCCAGTGTTAAGaTAACTCTAGGAGATAGGCTACCCTCACAAATTTGTTGTGATTGTGGAGATAAACTAGAATTggcttataaatttaaaatacaagtaGAAGAAGCTGACACAATATTAAGGCAAAGGTTGGATTCAGTGGATGTAAAGGAAGAACTATTTTTTGGTGATGTAGGTGTTAATTTATCAACTCATAAAAATGATGCGGAAGCAATAACTGAAAACAGTGTATTACTAAAGGATCACATAGAAATGCTGAGTGTTGGAAAAATAAGTCAGAATGAATCCATGGAAACTGAACATAAACAAGGAGAAACAAGTGAAACAAATGATGATAAGCTCAAAGTTCAGAAAGATGAAACTGTAGACAAAAAAGATAATGATCACGAAATGGGAAATGCTAATGATGAAGAGCAGTTACAGGTGAATAAAGATAAACAAACACAAGAGAtaatgttaaatgaaaaaaatgatccGACAAAAATGCAAGTGGAATTGAATCAGTTCCATCATTTAGCAATAAACGAGCATGATTATGTTATAGAATCACGATTATGTAAttctttaaatgaaataaatgttataaacaCAGAGgaaattAAACAACATAATAAAGATGATATAGATGAGAATTTAATTAATAGAGAAACAGGTCTAGtatataatgtaaaagaaaacaCAACATCAAATGAATCAGTTCcttcagAAAAAGAGCAACTTTTAAAAACAcctgaaaaaatttcaagtgaCAATACAAGTCCAATTCCATCAAAGACAGTATCAAGTGGAAAACGATCCAACAAATGCCCTCATTGTGGTAAAGAGTacctttatattatttcatttaagaaACACTTGAAGCAgcatgaagaagaaaaaagtgcaTCAAAAGATAATACTATGCCACTGGAAGTTTCTTTCCAGGAAGATGATGATATCTTAGATTTTCATAGTTATGAAGACAATCATGCTTCAGATTCTGATAGTGAATTCAATGAAACAAAAGATAGtataaaaacagaagaaaaaatgaaaatagaagaTTTTACAgagaaaaatttacaagaaagtAGTATTGAAGCAGTAGAAAAGCTACAAGGCCAATGTGCTACAATAGTTAACgataaaatatttgatgaacaaaattcaaagaaaacaaATCTGGAATTGtctgATGTTGctgatgttttaaaaaatgaacaagTTTTAGAAGTAGATAAAACTCAAGTGTCTAACGAGACGCTAAAGAAgaatgaagaaattaaaaaacacaaatgTCCACATTGTTCTCTTGTatttcgagataaaaataattttaacaaacatttaGAAAGTCAcaagaatgtaaaaaatattagcaaGCCCAGCAGTCGTCTGCAATGTAACCAGTGCAATAAGAGTTTTGGAAATGAATTAACACTCAAAAACCATTTAATTGCAACTGGCCATAAAACAACTGTACATGGAGAAGAGTacaatacaaataaaagaataaagaggGTAGCAGCAAAAGCCGCACAAAAGATTATTGACAAAATCAAATCAGAAATGAGTTTGGATGAATCAGATGAAGAGCAGgaaaaagagcaagagaaagattttgactatattgaaattaaagaaGAACAAGTGGCTGACATAGATGATGAGGCGGAGTATGAACATTCCAgtccaaaaaaaagtaaaaaaaattcaaaaggtcTAATCTGCGAGACTTGTGGACTAAAGTGTACAACGAAACAGTCGCTTGCAAGGCATACAGAACAGCACACCAAGGAAGAAAATAAGCAAgacactgaaaaaaaaattgaagatcatCCAGAGGATGATGACCATTATGAAGGAGGTATCGACGACTGGCAAATGGAAAGTCACGAGTGTCCGACATGTAAAAAGAATTACAGTACAAAGAAATCGTTACTACGTCATCAGCTGTTACATGAAGATCCAAATTACGAATGTGATATATGCAACGTTAAATTTTATCGCAAAGACAAGCTCAAAACTCACTACGATAAGTGTTCTGAGAAAAATCCTGATCAGGTACGCAAGTGCAATATTTGTGGCGATACTTTTGAGAACAACGAAGTCCTACGCGAGCACAGGGTTAAACATGTAGAAGATGGTATTTTGACCGAAGAGGATTTGCTGGAAGCCGAATCTGAggacaaaaataatgaaaaactacCACGAAAACGACGAACGGATATTGTTGGTCTCGAATGCACCGAATGTAACAAGCGTTATTCTTCGAGAAAAGGATTATTGAGACACTTACAGGTGCACGAGGGTAAAAAATACTTGTGCGACATGTGTCCAAAGAAATTCTACAGACGAGAACATTTGAAAATTCACGTAGCCAAGCACAACATGGTAAAACCATTTAAATGTACACGATGCTCGAAACGCTTTATCAAAGAAGAACAGTTAAACAATCACATATTGAAACACGATCGTACGATAAAGAAGCCGAAAGAAAGTACAAGCGACGGCACTAAGCGCTTCCTATGTGAGATCTGTTCGAAGAGTTTCACACAGTCGACAACTCTAGTGGCCCACCTTCGAGCTCACAACGGCATTAAGCCTTACATTTGCGAAGTTTGCTCACGACCATTCACTACTAATGCCTATCTTAAGATGCACATGCGTACGCACACCCAGGAGCGACCGTACATCTGCCATTACTGCTCGCGAGCATTTGCCCGAGCTGACACCCTGGCCAATCATTTGACTTCCCACACTGGCGAGGCTAAATATCACTGCAAGTACTGTCCGAAGAACTTCCGTAGACTGAAGTCGCTCAAAGAGCACGTCTTCATTCACACGGGTCAGCGACCCTATGCTTGTCCAACTTGCGATCGCAGGTTCAACAATAACGGCAGCCGCTATGCTCACAGTAAGCGGTGTAAGCAGAACCAACAACAGTCTCGATCGTCTCAAGTTTTCGTACATAGCGAAGAAAATGTTGAAGAGCAACAGGAAGAACAGATCGAACCACAGACCGTGCAACTGCAGCTTATAGAACAGTCAGAATTAGAGGAGGTAGACCAGTCGCAAGCACAAATTGTTCAGAGGATAGGTCAAGTGGCAACGATCAAGCCTCAAAGCATTAAAACCATCACTATCGCTAGGCCTGTTGATGGTACACTCGGACAACAGCATGTCATGGCCCATCAAGAGATCCTTATGCCTTTAATCTTGCCGTTTGCAGTAGCACTTGGAGATTGTAATGACGAGGTAATTTTACCTGAAGGTACTAAGATCTTTACGACGTAA
Protein Sequence: MDICRVCLLCTDSMRGIFHQDDIPSLANKLMLLASVKITLGDRLPSQICCDCGDKLELAYKFKIQVEEADTILRQRLDSVDVKEELFFGDVGVNLSTHKNDAEAITENSVLLKDHIEMLSVGKISQNESMETEHKQGETSETNDDKLKVQKDETVDKKDNDHEMGNANDEEQLQVNKDKQTQEIMLNEKNDPTKMQVELNQFHHLAINEHDYVIESRLCNSLNEINVINTEEIKQHNKDDIDENLINRETGLVYNVKENTTSNESVPSEKEQLLKTPEKISSDNTSPIPSKTVSSGKRSNKCPHCGKEYLYIISFKKHLKQHEEEKSASKDNTMPLEVSFQEDDDILDFHSYEDNHASDSDSEFNETKDSIKTEEKMKIEDFTEKNLQESSIEAVEKLQGQCATIVNDKIFDEQNSKKTNLELSDVADVLKNEQVLEVDKTQVSNETLKKNEEIKKHKCPHCSLVFRDKNNFNKHLESHKNVKNISKPSSRLQCNQCNKSFGNELTLKNHLIATGHKTTVHGEEYNTNKRIKRVAAKAAQKIIDKIKSEMSLDESDEEQEKEQEKDFDYIEIKEEQVADIDDEAEYEHSSPKKSKKNSKGLICETCGLKCTTKQSLARHTEQHTKEENKQDTEKKIEDHPEDDDHYEGGIDDWQMESHECPTCKKNYSTKKSLLRHQLLHEDPNYECDICNVKFYRKDKLKTHYDKCSEKNPDQVRKCNICGDTFENNEVLREHRVKHVEDGILTEEDLLEAESEDKNNEKLPRKRRTDIVGLECTECNKRYSSRKGLLRHLQVHEGKKYLCDMCPKKFYRREHLKIHVAKHNMVKPFKCTRCSKRFIKEEQLNNHILKHDRTIKKPKESTSDGTKRFLCEICSKSFTQSTTLVAHLRAHNGIKPYICEVCSRPFTTNAYLKMHMRTHTQERPYICHYCSRAFARADTLANHLTSHTGEAKYHCKYCPKNFRRLKSLKEHVFIHTGQRPYACPTCDRRFNNNGSRYAHSKRCKQNQQQSRSSQVFVHSEENVEEQQEEQIEPQTVQLQLIEQSELEEVDQSQAQIVQRIGQVATIKPQSIKTITIARPVDGTLGQQHVMAHQEILMPLILPFAVALGDCNDEVILPEGTKIFTT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -