Basic Information

Insect: Leptomastidea abnormis
Gene Symbol: -
Assembly: GCA_030522805.1
Location: JAPYZE010002937.1:8494-14468[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.0079 1.4 10.8 0.1 3 23 238 259 237 259 0.96

2 27 0.016 2.9 9.8 0.3 2 23 335 357 335 357 0.95

3 27 1.2 2.2e+02 3.9 0.1 1 23 385 408 385 408 0.90

4 27 0.13 23 7.0 0.7 1 23 423 445 423 445 0.96

5 27 0.98 1.7e+02 4.2 0.3 1 23 456 479 456 479 0.94

6 27 0.04 7 8.6 1.8 1 23 526 549 526 549 0.97

7 27 0.00094 0.17 13.7 1.2 1 23 575 598 575 598 0.96

8 27 0.00015 0.026 16.2 2.1 1 23 604 627 604 627 0.95

9 27 0.00046 0.081 14.7 3.0 1 23 632 655 632 655 0.96

10 27 0.00018 0.031 16.0 0.4 1 23 660 683 660 683 0.97

11 27 1.1e-06 0.00019 22.9 0.8 2 23 690 711 689 711 0.97

12 27 4e-05 0.007 18.0 1.6 1 23 717 739 717 739 0.97

13 27 9.3e-06 0.0016 20.0 1.8 1 23 745 767 745 767 0.98

14 27 0.0081 1.4 10.8 0.5 1 23 846 869 846 869 0.96

15 27 0.012 2.2 10.2 2.9 2 23 1037 1059 1037 1059 0.97

16 27 0.06 11 8.0 2.0 2 23 1102 1124 1102 1124 0.96

17 27 1 1.9e+02 4.1 1.4 1 23 1148 1171 1148 1171 0.93

18 27 2.1 3.6e+02 3.2 1.4 1 23 1186 1208 1186 1208 0.95

19 27 0.011 2 10.3 0.3 1 23 1218 1241 1218 1241 0.96

20 27 0.0036 0.64 11.9 3.5 1 23 1292 1315 1292 1315 0.98

21 27 0.36 63 5.6 8.5 2 23 1335 1357 1334 1357 0.94

22 27 2.1e-05 0.0038 18.9 1.1 1 23 1363 1386 1363 1386 0.96

23 27 0.0038 0.67 11.8 0.7 3 23 1393 1414 1391 1414 0.94

24 27 0.00054 0.096 14.5 1.5 1 23 1419 1442 1419 1442 0.97

25 27 2.9e-06 0.00052 21.6 0.6 2 23 1449 1470 1448 1470 0.97

26 27 4.8e-05 0.0085 17.8 1.3 1 23 1476 1498 1476 1498 0.91

27 27 5.6e-05 0.0098 17.6 0.4 3 23 1506 1526 1504 1526 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.0079	1.4	10.8	0.1	3	23	238	259	237	259	0.96
2	27	0.016	2.9	9.8	0.3	2	23	335	357	335	357	0.95
3	27	1.2	2.2e+02	3.9	0.1	1	23	385	408	385	408	0.90
4	27	0.13	23	7.0	0.7	1	23	423	445	423	445	0.96
5	27	0.98	1.7e+02	4.2	0.3	1	23	456	479	456	479	0.94
6	27	0.04	7	8.6	1.8	1	23	526	549	526	549	0.97
7	27	0.00094	0.17	13.7	1.2	1	23	575	598	575	598	0.96
8	27	0.00015	0.026	16.2	2.1	1	23	604	627	604	627	0.95
9	27	0.00046	0.081	14.7	3.0	1	23	632	655	632	655	0.96
10	27	0.00018	0.031	16.0	0.4	1	23	660	683	660	683	0.97
11	27	1.1e-06	0.00019	22.9	0.8	2	23	690	711	689	711	0.97
12	27	4e-05	0.007	18.0	1.6	1	23	717	739	717	739	0.97
13	27	9.3e-06	0.0016	20.0	1.8	1	23	745	767	745	767	0.98
14	27	0.0081	1.4	10.8	0.5	1	23	846	869	846	869	0.96
15	27	0.012	2.2	10.2	2.9	2	23	1037	1059	1037	1059	0.97
16	27	0.06	11	8.0	2.0	2	23	1102	1124	1102	1124	0.96
17	27	1	1.9e+02	4.1	1.4	1	23	1148	1171	1148	1171	0.93
18	27	2.1	3.6e+02	3.2	1.4	1	23	1186	1208	1186	1208	0.95
19	27	0.011	2	10.3	0.3	1	23	1218	1241	1218	1241	0.96
20	27	0.0036	0.64	11.9	3.5	1	23	1292	1315	1292	1315	0.98
21	27	0.36	63	5.6	8.5	2	23	1335	1357	1334	1357	0.94
22	27	2.1e-05	0.0038	18.9	1.1	1	23	1363	1386	1363	1386	0.96
23	27	0.0038	0.67	11.8	0.7	3	23	1393	1414	1391	1414	0.94
24	27	0.00054	0.096	14.5	1.5	1	23	1419	1442	1419	1442	0.97
25	27	2.9e-06	0.00052	21.6	0.6	2	23	1449	1470	1448	1470	0.97
26	27	4.8e-05	0.0085	17.8	1.3	1	23	1476	1498	1476	1498	0.91
27	27	5.6e-05	0.0098	17.6	0.4	3	23	1506	1526	1504	1526	0.95

Sequence Information

Coding Sequence: ATGTTATTCTTGAACAACAGTAGCAACATTAAAGTTTTGGTCAGCCCATCAAACAGTGCCAGTCCTCGGAAGCCCGTCCCTGACAAGAAGCTCCTTCTGAAGATCGGCAAGGTGAAACGACTGAACGAGAAAAAGCCAGCTAAAGCCAAGTCTAAGTCTAAGTCTAAGCCAATTAAAGCCAGCAGTATTACTCGCTCTCTCCTCGACATCTGCAAGCCCTGCAAAGTTGTCATCACACTTGGAGTGTTTGATCTTCAAAAGCGTGATGTGGAGAGTCAATCGATCACGACAATAAATGATGAAGAGACTACTAGCCCATTGAAGACTGATACATCCACGCCAGcaaatgaaatttcaatttttgaacaGATCGAGTCTATAGGATATCACGTGGGTAATGACGGCCAGTTAGCATGCGATAGTTGTAGTTTTCAAACGACTCTTCACTCAAAAATTCTAACTCACGTAGCTGAGTTTCACGAGAAACCGATCACGAGCGAATTTGTTGATGAATACGTTGATGTAGAAACTATTGAAGAGTTTTCAATAGGAAAAGAAATtgtggaaaagaaaaaggaagaagaacaCAAATGTGATCACTGTTCGTTCAAGGCATCAAAACTTGCGATTTTAAACATCCATGTAAAGATTAAGCATAAAGATAAGTGCAAGGATACGTCAACGAAAAAGTCGAAAGGAGAACTACGCGATTGTCCCTACTGTCCGTATCAAACTGCGGTACCCTCGACTTTACGTTCGCACGTGCAACGTAAGCATCCTGGAGAGAAGCTCGAGAGGATTGCAAATAAAGTCGCGCCTAAAagtagcaaagaaaaaaataagcccAAGACCGAATCGTCAGAACAACAGGGTGATGATGAATTAGCTGATACGACGCAGCAGAATCAAATGGTTATTGAAgatatcaaaaatgaaaaagaagaagataaagaagaagaagaagaagggataaTGGCTGAAGAAAGCGATAAACCAAAAAGAAAGTGTAAATTATGTGATTACGAGACAACGCTTGCGTCAACTTTGAAAGCTCACGTGTCGAGCGAGCACAAAGTGGATAAACCACAACGTAAAAAGCAACGACTCGATTCATCCTTGACAGCTTcgataagaaaaaaactaaaaataggCTACCCTTGTCAGTATTGCAACTTCGTAGCAGCATCGATATCAAGTATAAATGCCCACAACTCACGGGAGCACTCGAACGCTAAGCCAACTTTAATCGAAATACCAGTAAGCGAATTCGATTGTCATCAATGCGAATACAAATCGAGCGATCGTCCAGGTATGTGGGTTCATTTGAAGGAGCATAAAAAGCTACGTCCCAACGAGGATGGCATGTACGCGTGCCAGGAATGCAATTACGAAAGCAGCTGGAAAAAGGGATTGGTTAAGCACGTATCGATGAAGCATAACGCGCTACGTCACAGTGCTTTTAAATTAGATATGGAAGCTTGTCAAAGATGCGACGAGTGTGATTTTCAAACTTTCAATGCCAATATTATGAATTGGCACAAGCATCAACATAATAATGCAATCGAGGGTAAGAACTACCAGTGCGACGAATGTGactttttaacttataataaaaacaagattCGTCGTCATCTCAAACGTATACATAATAATGAGGAGGCTCAGTCTCAGTCGACCGAAGGTGGAATTGAAAATAACGTTGAACCTGTTCTTATAAATAGATATCCGTGCGAGCATTGCGATTTCATAAGTAAAAACAAGGATTCGCTCAAAGTCCACGTGATACGCAAGCACACCGAAGGTTTCAATTTCTCATGCGAATTGTGCGGGAAGAACTTCAAGTTACGCACTGATCTCACTAATCACACGCGCTTCCAGCATCGCGAGAAGCCTTACATTTGCGATGTCTGCGGTAAATCCTGCATTAACAGCAATTCGCTTTACGTCCATCAAAAGCACAATCATTTCAAATCGCAATTCAAGTGCCAGTTGTGCTCGAAAAACTACGCGAGTCAGGAGAATCTTGATGCGCACATAATCAAGCAGCACGAGCAGCGTAAGGATATAGTGTGCGACGAGTgtggtaaaaaatttacacgtCAGAATAGACTTAAGATCCATATGCGATTGCACAGAGGCGAGAAGCCATTCTCCTGTAAGATTTGCAATAAATTCTTTGCTTCTAAGAATGGACTTAGGCAACATCTTTTTGTACACTCAAAAGAGCGACCTTACATATGTGAAATATGTGGCAAATCCTTTAAGCATAAGTCTATACTCATCAGTCATAGGAATACTCATCCAGGACCACATGAACCTTTACCCAAGATGCCCGTTAAACATGTACTTTTAAATAGCGTAACGTGCACATTACTGCCACCAATGACAACCAGCTCATCAAGCAGTTCCAAGCATCAAAAATTCGTCTTCGACAAGAAGCTCGTGAAGATTAGCGAAACGCAACAGCTGAAATTGAAAAGACTCGTTAAGAATAAACCTAAGATAAAATCTGAAACTTTAGACAATCTTGTTCTCTACGTCTGCAAGCTCTGCAAGGTCTTCTTCCCGGACGAACAAGCGCTTGTACATCACAAACGTGCAGTGCACAGCCAGTCTGTTACgataataaaggaaaaaaaagctagTCCACCTAAGACTGCTAAGACTACCACTCCTACTACTGCTTCAACTGCTACTACGTCTACTAGATCATTAAAAATGATTCCAGCTACTATTATAAAACAAGTCAAGCCTAGAGGCTATCACGTGGATAATGACGGCCAGTTAGTATGTGATACTTGCAGCTTTCGTTCGAATTTACTTTCTGGTATTCTCGCTCATCCTCACGTAACTGAGTACTATCAATCCTGCATCATGAACAAGAAGCCACCCAATGAGAACAATAAAGCTATTAAGGAATCTagtgaaaaagataaaattgaaaagatcAAGGTAACGATACAAAAGATGTCGGCAGGACAAGTACTGAAATGTGCTTACTGTTCTTTCAAGGCCGTAAAACATTCGGTTTTAAATATGCACGTTAAGGACAATCACAAAGATAAGTACGAGGAGATGTTAGCGAAAAAATGGAAAGGACAATTGAGAAAGTGTCCACATTGTCCGTTTCAAGTTGAGAATCCCTCGACTTTACATTCGCACGTTAGACGCAAGCATCTTGCAAATAAGTTTCAAACGGTTGGAGACATATTAGAGACTGCTGAACAACAAGAAaatgatgttgaaaaaaatattactaaaagaAGTGCGGTGATAGCTAGTAAAATCGACAAGCCTAAAAGGAAATGTAAATATTGTGATTTCGAGACAAAGCTTGTCAAACATTTGAGAGCACACATATCAAGCGAGCACAGTAAAAAACAACGAAGCAAATCCAGCGATGATCGTCTCTCACCTTCGTCGAAAGATAGACAAACGGGATATGCTTGTCAGTATTGCACCTTTGTCGGATGTACGGTGGCCAGTTTAAGAACACACAACTCTCGAGAACACTCCAATGTAAGACCAGTAATGATGGAAGTCCCGGTTAATGAATTCGATTGCGATCAATGCGACTTCAAGTCGAACAATCGGCTAACCATGTCGATTCATCGTAAGGAGCATAAATTACGTCCCAACGAGGATGGTATGTATACCTGCGAGGAATGTAATTATGAAACGAATTTTAAAGTCGGACTGTTGCGTCACGTGTTAGTCAAGCACGACAAGCCACGCCACGATGCTGACAAGCTTGACATCAATGATGGTTTAAGATGCGACAAGTGTGAGTTTAAGTGTCTCAATGCCAAGACTATGGATTGGCATAAGCTTCAGCATAATTACGTATCGGATAATGCGGAGATGGGTAGGAATTACCAGTGCAACGATTGCGACTTTTCAACCTGGAATAAACACAAACTTCGTGTTCACATTAGACGTAAGCATAAAGAGGAGCCTGGACCTACCGAAGATGCAAGGTCAGATGCTGAATTGAATCCTTGTGAATGCCAGCAGTGTGGTTTCATCTGTAGAAGCAAGCATACGCTCAAAACCCACACAATACGCAAGCACACCGAAGATTTCAAATACGAATGCGACATATGTGGCAagaagtacaaaattaaaaatgatctgTCGAATCACATGCGTTTCCAGCATCGCGAGCCACATGTTATCTGCGACGTATGCGGTAAACTTTGTCGGAACAGTAATCTACTCTACGTTCATCAAAGGTTTGCTCATTACAGGCCAGATTTTGAGTGTCACATATGTCATAGACGTTTGGCAACTCAAGCTAATCTCGATGATCATATAATTAAGCAGCACGAACAGCGTAAAGAATTAAAATGTAAGGAATGTGGAAAAGTATTGTCAAGTACCTCTACGTTGAATATGCATATGCGAATACATACAGGCGAGAGGCCCTACTCTTGTGATGTTTGTAACAAGACTTTTAATAGAAGATCAAAACTTACCGAGCATAGTGTTTTACATACTGGACAGCGACCACACTTGTGCGAAATATGTGGCAAAGCTTTTGCCCAAAGGGCTGGGCTTGTCAATCATAGGAAAAATCATCCACAACCTGATCATCCACTTTCGCCTAGTAGGACTCTCGAACTAGCAATTGCAGGTCTGCTTAACgagagataa
Protein Sequence: MLFLNNSSNIKVLVSPSNSASPRKPVPDKKLLLKIGKVKRLNEKKPAKAKSKSKSKPIKASSITRSLLDICKPCKVVITLGVFDLQKRDVESQSITTINDEETTSPLKTDTSTPANEISIFEQIESIGYHVGNDGQLACDSCSFQTTLHSKILTHVAEFHEKPITSEFVDEYVDVETIEEFSIGKEIVEKKKEEEHKCDHCSFKASKLAILNIHVKIKHKDKCKDTSTKKSKGELRDCPYCPYQTAVPSTLRSHVQRKHPGEKLERIANKVAPKSSKEKNKPKTESSEQQGDDELADTTQQNQMVIEDIKNEKEEDKEEEEEGIMAEESDKPKRKCKLCDYETTLASTLKAHVSSEHKVDKPQRKKQRLDSSLTASIRKKLKIGYPCQYCNFVAASISSINAHNSREHSNAKPTLIEIPVSEFDCHQCEYKSSDRPGMWVHLKEHKKLRPNEDGMYACQECNYESSWKKGLVKHVSMKHNALRHSAFKLDMEACQRCDECDFQTFNANIMNWHKHQHNNAIEGKNYQCDECDFLTYNKNKIRRHLKRIHNNEEAQSQSTEGGIENNVEPVLINRYPCEHCDFISKNKDSLKVHVIRKHTEGFNFSCELCGKNFKLRTDLTNHTRFQHREKPYICDVCGKSCINSNSLYVHQKHNHFKSQFKCQLCSKNYASQENLDAHIIKQHEQRKDIVCDECGKKFTRQNRLKIHMRLHRGEKPFSCKICNKFFASKNGLRQHLFVHSKERPYICEICGKSFKHKSILISHRNTHPGPHEPLPKMPVKHVLLNSVTCTLLPPMTTSSSSSSKHQKFVFDKKLVKISETQQLKLKRLVKNKPKIKSETLDNLVLYVCKLCKVFFPDEQALVHHKRAVHSQSVTIIKEKKASPPKTAKTTTPTTASTATTSTRSLKMIPATIIKQVKPRGYHVDNDGQLVCDTCSFRSNLLSGILAHPHVTEYYQSCIMNKKPPNENNKAIKESSEKDKIEKIKVTIQKMSAGQVLKCAYCSFKAVKHSVLNMHVKDNHKDKYEEMLAKKWKGQLRKCPHCPFQVENPSTLHSHVRRKHLANKFQTVGDILETAEQQENDVEKNITKRSAVIASKIDKPKRKCKYCDFETKLVKHLRAHISSEHSKKQRSKSSDDRLSPSSKDRQTGYACQYCTFVGCTVASLRTHNSREHSNVRPVMMEVPVNEFDCDQCDFKSNNRLTMSIHRKEHKLRPNEDGMYTCEECNYETNFKVGLLRHVLVKHDKPRHDADKLDINDGLRCDKCEFKCLNAKTMDWHKLQHNYVSDNAEMGRNYQCNDCDFSTWNKHKLRVHIRRKHKEEPGPTEDARSDAELNPCECQQCGFICRSKHTLKTHTIRKHTEDFKYECDICGKKYKIKNDLSNHMRFQHREPHVICDVCGKLCRNSNLLYVHQRFAHYRPDFECHICHRRLATQANLDDHIIKQHEQRKELKCKECGKVLSSTSTLNMHMRIHTGERPYSCDVCNKTFNRRSKLTEHSVLHTGQRPHLCEICGKAFAQRAGLVNHRKNHPQPDHPLSPSRTLELAIAGLLNER

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -