Labn001908.1
Basic Information
- Insect
- Leptomastidea abnormis
- Gene Symbol
- ZFY
- Assembly
- GCA_030522805.1
- Location
- JAPYZE010000259.1:4682-18487[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 27 6.8e-05 0.012 17.3 3.2 1 23 183 205 183 205 0.97 2 27 3.2e-05 0.0057 18.3 0.5 1 23 211 233 211 233 0.98 3 27 1.7e-05 0.003 19.2 0.2 2 23 239 260 239 260 0.98 4 27 0.00024 0.042 15.6 0.2 2 23 267 288 266 288 0.96 5 27 0.0031 0.54 12.1 2.1 2 23 299 320 299 320 0.97 6 27 2.9e-05 0.0051 18.5 0.7 1 23 341 363 341 363 0.99 7 27 6.6e-06 0.0012 20.5 2.8 1 23 369 391 369 391 0.99 8 27 0.0013 0.23 13.3 5.7 1 23 397 420 397 420 0.96 9 27 0.1 18 7.3 6.2 1 23 432 455 432 455 0.95 10 27 0.00024 0.042 15.6 4.9 1 21 555 575 555 577 0.95 11 27 6.5e-05 0.012 17.4 1.6 1 23 583 605 583 605 0.99 12 27 2.4 4.2e+02 3.0 0.0 2 23 626 648 625 648 0.94 13 27 0.0096 1.7 10.5 1.1 1 23 648 670 648 670 0.95 14 27 0.002 0.35 12.7 3.1 1 23 734 756 734 756 0.98 15 27 2.6e-05 0.0046 18.6 3.6 1 23 762 784 762 784 0.98 16 27 1.7e-05 0.0031 19.2 0.6 1 23 790 812 790 812 0.96 17 27 0.00049 0.087 14.6 5.3 1 23 818 840 818 840 0.97 18 27 0.94 1.7e+02 4.3 2.5 2 23 1121 1142 1120 1142 0.92 19 27 0.058 10 8.1 5.8 1 23 1148 1170 1148 1170 0.98 20 27 0.00094 0.17 13.7 1.6 1 23 1176 1198 1176 1198 0.97 21 27 1.4e-06 0.00026 22.6 1.0 2 23 1235 1256 1235 1256 0.97 22 27 0.0026 0.46 12.3 5.5 1 23 1262 1284 1262 1284 0.99 23 27 0.00016 0.029 16.1 6.2 1 23 1290 1312 1290 1312 0.97 24 27 0.0085 1.5 10.7 4.4 1 23 1318 1340 1318 1340 0.97 25 27 4.1e-07 7.2e-05 24.3 1.7 1 23 1532 1554 1532 1554 0.98 26 27 1.3e-06 0.00022 22.7 5.1 1 23 1560 1582 1560 1582 0.98 27 27 2.8e-07 4.9e-05 24.8 2.4 1 23 1588 1611 1588 1611 0.98
Sequence Information
- Coding Sequence
- ATGGATTCGTCAACTTTggattcatctttttttatgcttactGATGATGGCAGTACTTTATTATCTGTGCGACAGACAGCAGATGGAAGCTTAGAGCTTCTCTCGACTCCAGTAACAATTTTGCCAAATGCAGAACCACCTTTACAAACACCTTCATCATCAAGCACTGATGCCACAAATCAAaTTTATTCAGACACTGAACTCAATAACATTGATCAACTACATTTGCCTTCCAATGCATCTCTTGATTTGGAACCACAAGATTTATCtgtattgaataaaaaacaaaatgtatctgTTGATATTGAAAACAGCTCATTGCAGAATGAACATCAAACTAATTCAGATAgtgtaataattcaaaatttagaaaCAACTACTACAAATATTGAACCAAATAACTTAATAGAACAGTCGCTGAAAAACTATCATTTAAAAGAAGCAAGAGTTCGAATTGAAAAACTGTCTATACCTCCAAAAAAACATGCTCGTAAGAAACTTGGAAGACCAAAAAACAGTACTAAAACTGTAAAAgagCCACCATGTTTTAAGTGTGATTTGTGTGGTCAAGAGTTTAAAAAACAATACCTCTTACAAAAACACTTGCATGAACATGCCCAAGACAAGCCACATCAATGTCCAAAATGTCCTGCAACATTTAATGTGCCTACAAACTTCACTTTACACATGGCGACCCATAAAATCGGCGAGCCAAAGTGTCCCGAGTGCGGACGAAAATTTGCAAGAATTGCCAGTCTCAAGACACATTTACTTGTACACGAGATGGATGAAAGTCTCTACTGCACCGAATGTGATGACTCATTTGCAACTCAGaCTCAACTGGAAGCGCATATGAGTCTACATAATGAAAAATGGTCTAGCGACGAACACAGACGTTGCAAGCTCTGTCGCAAACAATTTACCAAACCGGTACTTTATCGCCAACACTTACGTGATCATTACAAACTGCAGTTGAAAAGTACAAGACAAACAAGAAGCGGAATTCAACATTTGACCTCTTATAAATGTAAGGTCTGTCTGAAATTATTTCAGAAACCAAGCCAGCTTGCTCGACATATTAGGGTACATACTGGAGAAAAACCGTATAAGTGCAATATTTGCAGTCGCAGTTTTACACAAAAGAACTCGGTGCGGATGCATATGAGGCAGCACAGCAATGTCCTACCATTCAGCTGTACACTCTGTCATGCAAAATTCAGACATAAATataaTTTGAAAGATCATGAAAATCGAGTTCATCGACAGTCAGAAGAGGATAAAGGTCGACCGATGTACAGATGTTCACAGTGTCCttgtacttataaaaatataaagagccTCACCTACCACATACATTACACTCATAATAAGTCAAATGAACAGAAGACCCTAAATCATGACGACGAGAacgaagcagaagaagaagaagaaaatgcagaggaggaagaagaagagcgtCTAAGTTCCAATGTCAACCAAGAGCAAGCCGGTCCAGACACTGAAGAAGAAGAGCTGGATCTTGAAAATAACTCTCCCGAACAAGTAGATGATGGTTACGTCGTTATGGATGCAAAGAAGAAGACCGCAATTGTTACAGTACTTGATAAGAGCAAAGGaaaatacattaaattaaaacagcGTCTAGTCAAAAACTCAGTATTTTACGACTGTACGTTTTGTcacaaagcttttaaaaaacctTCTGATCTTATTCGACACTTGAGATGTCATACCAAAGAAAAGCCTTTCAAgtGTAAAATCTGTGAGAGATCGTTCGCGCTAAAGTTAACACTGGAGACTCATCAAAAAACtcatgcaaaagaaaaagaaaaaagaaaaggaaaagagaaagaaaaagaaactttagGACACATACCATGCCTTATGTGTAAAGCAGTTGTGAGTTCAGAGAAAGTCCTGGCAACCCACATAGAAAAATTCCATCGGTGTACTATTTGCAACAAACGATACGAGAACTTGGAAGAGCAAACAAATCACGTATCGCTCCATCTGCAATACTTAccagagaaagataaagattcAGCTGCAAAAACTAAAAGCAAGGTACCACCGGAAGTAGAAAGTCTCGCAAGCAAAATCGTCCTACAAGAGCCGCTTGTCATTAAGGAATCTGATAACGGTCAAGTGCACGCACAACCTAGCTATCGAAATAATTTAGCTCGTGGCAAAGGTCGGCCGCACAAGTGTCCTAGCTGTCCAGCTGCTTTCATGAAAGTTAGCCATCTTACACAGCATTATCGCAGGCATACCGGCGAAAGACCTTTTAGTTGTAGACAGTGTAATCGcaAATTTTCGAGCAAGAGTACACTTAAGGCTCACTTTAGGATACATGAGCAATCGAAACCCTATCTTTGTCCTATCTGCGATCAGAAATTTGCTTCTCTTAGCAGTATGAAACGGCATCAATTAAGGCATTCTAACAAAAGAGGCTTCATGTGCCCTTAttgtaataaaacatttaagtCCACAAATAACTGTAAAAAACACATGCAAGGACACAAGCAAGAAATTGCTAAAcagCAACTTGAACTTCAGGAAAAACATCAACAGCCTAATAAACCTATAATAATTAGTGATCAGAGAATAACTTATCAGCCTATAACTGCTAATTTAACGCTTAATTTGAATGATCAGGTTCAAGATCTAAATCATATTCAAAAGACAAACAACTCTTGTTTTTCTACAGTTCCGGTAACGCAAAACACTCAAACTCTAACACaaaatattCCTGTAATGAATAATTCTAACAAAAGTTCAGTCAAAACTCTGCATGCAGATGAAACTGGTACTATTACCCTGCCTAATTACAGTGATAGTCAAACACTCACTTCTGAAAATATTAAGGAGCTGGAAGAGACTTTGAATCAACAATTACTTAACCTAGGAGTCAATTTTACTATGAGTAATAATGTTCAACAAATTAACGAACAAAGTATTTTGTCTGCGGAAACTCAAGAGCAGCCtgttttaagtattatttatgataatggTACAACTTTACAATCTCAAGTTCCTCTCAGTGCTGTAACAGGGACTGATAATTTGAATGTCTTAACAACTCATTTAAGTAGTTTTGATATCAATCAATTAatggGTAATGGAATGAATATGGGAATTATGCAAAACAGTGCAAATAACATTATTGGAGTTTTGACAAATACTATTCCACAAAATCAGTCTAATCCATTACCATTAGTTACCAATGATTTTGAATTCCATTCCTTAACTCAACAAAACAAACTAAATGAAGTTTTTGAACAAAGCAACTATGCAATAACAAATGAcgaaaataaatctattaaacaaaagaaagtaaaaaataaaaaagaagttaatttaCAGTGCCATGTATGCAACAAACAAAAACTGAGCGAGAATGATTTAAAAGAACATATGAAAACgcatcaagaaagaaaaaaatacgagTGTACGCATTGTTCATCAAAGTTTTGTTCTACAAGAGGTCTCAGTAAACATGTTAAAATTCACGAACTTCAAGAaaaacacAAGTGTTATGAATGCAATCAAGAGTTTCCTACTAGTCTACAATTAAGGGAGCATATTAAAGATCacgttaaaaaagaattaaaacttaaaaatccgGAAAACGCTGACGATGTTATTAAGGAACTAGAATCAGATAATaaaaataaaaataaaaagaaaaatagtacaACAAACTCGTGCCAATATTGTACAAAAGTATTCCGTAAACCTAGTGATCTCGTAAGACATGTAAGAACACATACTGGTGAACGTCCATATCAGTgtcatttttgtcaaaaaagttTTGCTGTTAAGTGTACATTGGATTCTCATCTAAAAATTCACAGCAATGAAAAATCATTCCACTGCCACGTTTGCAAGAATATGTTTTCAACAAAAAGCAGCTTAAAGACTCATATGAGTATACATACAGGTATACTGCCCTTTAAATGTTCTATGTGTGATATGAAGTTTCGTACGTCTCGTCTGcgcaaaaaacattttctctcCCATACAAAAGAACCAAAATCTGATTtggaaaatcaaattgaaaatacgCCACCTTCACTGCAAATTTCAGAAATGCAAATTATGTCTGGacaaacattttctcgaatatGCAATGAGCCTCAGCCTGTAGTTGTGCAGCAGATTATCGACCAGAATCATGAGCAAAATCTTGATCAGCTAACGATTTCTGGTGAGATTAGCTTTAATACAGACGGTACAGACGGTGAATTATTGAGCCTTGGTGAAAAGAATCAACTAGTCGCCAATCTGCAATTCCTTCTCGCTAATGGTTTAGTCACTATCCAAACGGAAGATCCATCGACCAATCAAGTGTCACTTGCAACGACAGGTATTATGCAAAGCAACTATGAGCTACCTCAAGAAAAATCTACTGAAGATACACCCCATGTCTTCTTTAACGGAGATTCATTGCCCGATTCGACAGTGCAAACTACGAAAACTGAAGAGAGGGACAACTATATGGTCTTGCAATTGGACAGCGTGGACTCGACAGTGCAAATCAGGTCAAATGGAGAGACTGAAGAGAAAGCAGAACAATCGCCCAgCGGTACAAGACACGAGTGCGAAGAGTGTGGCAAAACGTTCACCAGATCAAGCGTACTGGAACGACACAAGCGAGTACACACGGGCGAACGACCATATAAATGCAACCAGTGCGACAAGTCCTTCAGTCAAAAATCTTCGCTAACGATGCATCAGCATAGTCACACTGGTAGTCGACCCTATCCTTGCGCTCACTGCGAACGCTCTTTTACTCAAAACTACAATCTACAAACCCATATGCGACGTGTACATAAATTCGAGCCTGCTGAGGCTAGGCGGCTAGTCAAAGCCATGCAATTCTTTAATTATGATCCTAAAATGCCTCAGACGATTGTTGAGGAAGACAAGTCACTTGTCGGCAATAGTATGCCGTTTGTTGATTTGCTTAAATGA
- Protein Sequence
- MDSSTLDSSFFMLTDDGSTLLSVRQTADGSLELLSTPVTILPNAEPPLQTPSSSSTDATNQIYSDTELNNIDQLHLPSNASLDLEPQDLSVLNKKQNVSVDIENSSLQNEHQTNSDSVIIQNLETTTTNIEPNNLIEQSLKNYHLKEARVRIEKLSIPPKKHARKKLGRPKNSTKTVKEPPCFKCDLCGQEFKKQYLLQKHLHEHAQDKPHQCPKCPATFNVPTNFTLHMATHKIGEPKCPECGRKFARIASLKTHLLVHEMDESLYCTECDDSFATQTQLEAHMSLHNEKWSSDEHRRCKLCRKQFTKPVLYRQHLRDHYKLQLKSTRQTRSGIQHLTSYKCKVCLKLFQKPSQLARHIRVHTGEKPYKCNICSRSFTQKNSVRMHMRQHSNVLPFSCTLCHAKFRHKYNLKDHENRVHRQSEEDKGRPMYRCSQCPCTYKNIKSLTYHIHYTHNKSNEQKTLNHDDENEAEEEEENAEEEEEERLSSNVNQEQAGPDTEEEELDLENNSPEQVDDGYVVMDAKKKTAIVTVLDKSKGKYIKLKQRLVKNSVFYDCTFCHKAFKKPSDLIRHLRCHTKEKPFKCKICERSFALKLTLETHQKTHAKEKEKRKGKEKEKETLGHIPCLMCKAVVSSEKVLATHIEKFHRCTICNKRYENLEEQTNHVSLHLQYLPEKDKDSAAKTKSKVPPEVESLASKIVLQEPLVIKESDNGQVHAQPSYRNNLARGKGRPHKCPSCPAAFMKVSHLTQHYRRHTGERPFSCRQCNRKFSSKSTLKAHFRIHEQSKPYLCPICDQKFASLSSMKRHQLRHSNKRGFMCPYCNKTFKSTNNCKKHMQGHKQEIAKQQLELQEKHQQPNKPIIISDQRITYQPITANLTLNLNDQVQDLNHIQKTNNSCFSTVPVTQNTQTLTQNIPVMNNSNKSSVKTLHADETGTITLPNYSDSQTLTSENIKELEETLNQQLLNLGVNFTMSNNVQQINEQSILSAETQEQPVLSIIYDNGTTLQSQVPLSAVTGTDNLNVLTTHLSSFDINQLMGNGMNMGIMQNSANNIIGVLTNTIPQNQSNPLPLVTNDFEFHSLTQQNKLNEVFEQSNYAITNDENKSIKQKKVKNKKEVNLQCHVCNKQKLSENDLKEHMKTHQERKKYECTHCSSKFCSTRGLSKHVKIHELQEKHKCYECNQEFPTSLQLREHIKDHVKKELKLKNPENADDVIKELESDNKNKNKKKNSTTNSCQYCTKVFRKPSDLVRHVRTHTGERPYQCHFCQKSFAVKCTLDSHLKIHSNEKSFHCHVCKNMFSTKSSLKTHMSIHTGILPFKCSMCDMKFRTSRLRKKHFLSHTKEPKSDLENQIENTPPSLQISEMQIMSGQTFSRICNEPQPVVVQQIIDQNHEQNLDQLTISGEISFNTDGTDGELLSLGEKNQLVANLQFLLANGLVTIQTEDPSTNQVSLATTGIMQSNYELPQEKSTEDTPHVFFNGDSLPDSTVQTTKTEERDNYMVLQLDSVDSTVQIRSNGETEEKAEQSPSGTRHECEECGKTFTRSSVLERHKRVHTGERPYKCNQCDKSFSQKSSLTMHQHSHTGSRPYPCAHCERSFTQNYNLQTHMRRVHKFEPAEARRLVKAMQFFNYDPKMPQTIVEEDKSLVGNSMPFVDLLK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -