Labn004738.1
Basic Information
- Insect
- Leptomastidea abnormis
- Gene Symbol
- lov
- Assembly
- GCA_030522805.1
- Location
- JAPYZE010000959.1:9712-13082[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.7e-16 2.2e-12 47.8 0.0 2 44 653 695 652 696 0.94
Sequence Information
- Coding Sequence
- ATGTCAAGCCCTTTGGCTTGCAGTCCCGATGATGAGGCTGGCATGTCCTCGAGTCAGCCGTCAAATTATTCGCTCAGATGGAATAATCATCAGGCACACATATTACGCGCCTTCGAGGATTTATTGCACAATGAATTACTCGTTGACGTGACCCTTGTTTGCGCCGAGACTGCAATCAAGGCTCATAAGGTTGTTCTTAGTGCCTGCAGTCCATTTTTTGAGCGCATATTCGCCGAGCATCCATGCAAGCATCCAACGATCGTGTTAAAAGACTTCTCGACGCGGGAGATGAACCATCTGATCGACTTCATGTATCGCGGTGAAGTACGAGTCGAGAGCGAGGACCTAGCAGCGTTGATGGACGCGGCGGCGAGCTTGCAAGTACGAGGTCTGATCCAGTCTGAGCCAAGGCCTGCAACGCCACCCGCGACACCAGCCACCGACAACCAGCTTCTCGACGATCTCCATCCGACCGACTGCTCGACGCCTGAGCCCAGTCGCGAGCCCGGACTCGATTCCTCGGCTAGCCTCGCCGACAACATGACCatcgacgaggacgaggagccTGGCCTTCCAGACAGTCCACCGATCATACCGCTTCCGCTGACCACGGCGCGCGAGGCAATGCAGAGCAACTGCCTTCAGCAACACAGCAGAGAACCTCCGCGAATCTTTCAAAATTCCATGCACCACCTAAATTACGGTCAACGGGAGCTCCTGGACAGCTGCTCTTCGTCGCTGTTACCTAGGCGGAAGCAGGCCAGGCCCAGGCGGAGATCCGGCGAACTCGTGCCCCAGGATCTCAGTAGAAGTCATCCGACGCCTAGTTCCAGCCCACCCAATACCGGGTTGAATCTCAGTAATCACAGTCATGGTCACAGTCATcaacatcatcaccatcatcaccaaCATCAACAGCACAGCCCAGAAGATAGTCAGTCGTCGagacaacaacagcagcagcaccgaaACGAAGAAACGCAACGTCACGACCAGGAGCACCGTTCGCCCCTGAGACATCATCCGTCgccacagcagcagccacaACAATCaccaccacaacaacaacagcagcagcaacaaaattcacagcaacaacagcagcagcaacaaaattCACAGCAACAACagactcagcagcagcagcaacagcagcagcagcagtcacagCAGTCCgaggagcaggaggaggaggcggagaATCTGTCGATGAAAAAGGAACCAAGGCAGTCTCGTTCGCCGTCGAGGTCGGCTGAGCCACCGGTCAAATCCGAGAGCGAGGAGGCAAACAGCACCCGAAGTTCACCGCCCCTCATCACCCACAGCAATCTCCATCCGGACGCCCCGTATGCGGATCTTCCCGTGCCGGGCCTGACCGCGATGTCCGGCCTCTCGAGGACCCCACCTCACCATCACGCCAACGAGTACCTGACGAACCTAGGCCAGCTCGCGGCACAGTGGCTGCCTGGAGCTGCGAGTCAACCGAATCATCTGTCCGCGTCCGGTGCGGGTGGCAATCCAGGCGGTGCCAGCATAAGCGGCGGAGGGGCTGGACCTCAGACGAGACATCCGCGTGAAGGTAGTCCCCATGGCAGCAAGCCTGGTGCGGCGTATCCCTACCAGCAGAGCGAGTCACCCCTCACGCCACGCAGCGCCTTCGCAATGGATGGCCTGCAGCCTCTAGCTGCAACTGCCGGTCTTTTTCACCACGGCGCTCCTTTCGATCTCCACGACAGCTTCAAGCCGGAAAGCTTGCAGAGCTTTTACGTGGGCGCGAATCTCGGACATCATCATCcacaccatcatcatcaccaccactcCGGCAAGAAGTCGAAAAAGCACAGGGGCGACAGCTCGGCTAGGCGCTGGAGCGATCACGTGCGCGGCTTGGGTCCGATGTGTCGACCGAAGGGCCAGCACAGCGCACCGCGAGGTGGACCACCCCGCTCCTGGACCAACTCCGACCTCACCGAAGCCCTGACGATGGTCTGGAACAAGCGGATGACCACGTCCCAGGCGAGCCGAGTATTCGGCATACCCTACAACAGTTTGCTCATGTACGTGCGCGGCAAGTACGGCAAGAGCTTGAAACTCGAGCAGCTGCGCAGGGATTGCGTCGCGGGCGAGGTCATGAACTCGATCAACAACAACGTCAAGCCAGCGGGCAGCGTCGACTCCCCCAGCCCCAGGCTGCCTCACGGCCTCACCGCTCCACCCCCCAGTGCCCATGCCCCCGGTCAACCCGGCTCGGGTCACCCCGACCCCGAGGCCATGGGCTATGGTCCACCCGGGCACTCGCTCCTGGGTCCAGGCTTCTTTCCCGAGCTTGCGGGCTTCCCCTTGCCGGTGAACATGGTGCATCTACTGCCACACAGCGAACAGAGCGCGTACGAACCGGGTGCTCCTCCAACGCCACCGGGTAACGGAGGTGGGGGCAGTAGCAACGGTCTCCTGAGCAGTAGTGCCGCAGGCTCGACGGGTCGGGACGAGCAGCGCAGTCGAAGCTCCTCGCCGCTCGAGCTTTCCGTGGACGGATTATCGGTAGAGCCGGTTGTCGGATGTCCACCCGCCCAGTTACTCCAGCAAAACGGCTCAGCGGCGGTCGAATGA
- Protein Sequence
- MSSPLACSPDDEAGMSSSQPSNYSLRWNNHQAHILRAFEDLLHNELLVDVTLVCAETAIKAHKVVLSACSPFFERIFAEHPCKHPTIVLKDFSTREMNHLIDFMYRGEVRVESEDLAALMDAAASLQVRGLIQSEPRPATPPATPATDNQLLDDLHPTDCSTPEPSREPGLDSSASLADNMTIDEDEEPGLPDSPPIIPLPLTTAREAMQSNCLQQHSREPPRIFQNSMHHLNYGQRELLDSCSSSLLPRRKQARPRRRSGELVPQDLSRSHPTPSSSPPNTGLNLSNHSHGHSHQHHHHHHQHQQHSPEDSQSSRQQQQQHRNEETQRHDQEHRSPLRHHPSPQQQPQQSPPQQQQQQQQNSQQQQQQQQNSQQQQTQQQQQQQQQQSQQSEEQEEEAENLSMKKEPRQSRSPSRSAEPPVKSESEEANSTRSSPPLITHSNLHPDAPYADLPVPGLTAMSGLSRTPPHHHANEYLTNLGQLAAQWLPGAASQPNHLSASGAGGNPGGASISGGGAGPQTRHPREGSPHGSKPGAAYPYQQSESPLTPRSAFAMDGLQPLAATAGLFHHGAPFDLHDSFKPESLQSFYVGANLGHHHPHHHHHHHSGKKSKKHRGDSSARRWSDHVRGLGPMCRPKGQHSAPRGGPPRSWTNSDLTEALTMVWNKRMTTSQASRVFGIPYNSLLMYVRGKYGKSLKLEQLRRDCVAGEVMNSINNNVKPAGSVDSPSPRLPHGLTAPPPSAHAPGQPGSGHPDPEAMGYGPPGHSLLGPGFFPELAGFPLPVNMVHLLPHSEQSAYEPGAPPTPPGNGGGGSSNGLLSSSAAGSTGRDEQRSRSSSPLELSVDGLSVEPVVGCPPAQLLQQNGSAAVE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00878128;
- 90% Identity
- iTF_00878128;
- 80% Identity
- iTF_00878128;