Lcyl024280.1
Basic Information
- Insect
- Leptogaster cylindrica
- Gene Symbol
- nfxl1
- Assembly
- GCA_963082835.1
- Location
- OY720109.1:9251611-9254865[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 1.1 1.7e+04 -3.3 0.5 15 18 120 123 119 124 0.79 2 20 2 3e+04 -7.8 5.6 15 19 172 176 171 176 0.81 3 20 0.13 1.9e+03 -0.3 0.4 4 10 207 213 206 213 0.95 4 20 3.2e-07 0.0047 17.6 17.6 1 19 221 238 221 238 0.99 5 20 1.1 1.6e+04 -3.3 1.1 5 10 263 268 263 268 0.93 6 20 6e-08 0.00089 19.9 14.0 1 18 274 292 274 293 0.99 7 20 1.4 2e+04 -3.6 1.8 6 10 318 322 317 322 0.89 8 20 6.4e-08 0.00095 19.8 12.1 1 19 328 346 328 346 0.99 9 20 1.7 2.4e+04 -3.8 0.8 5 10 370 375 369 376 0.55 10 20 5.1e-07 0.0076 16.9 13.1 1 18 381 398 381 399 0.97 11 20 0.22 3.2e+03 -1.0 0.8 1 10 408 417 408 417 0.89 12 20 2 3e+04 -5.0 2.3 5 10 422 427 422 427 0.91 13 20 5.2e-07 0.0077 16.9 16.2 1 18 433 450 433 451 0.98 14 20 2.9e-08 0.00043 20.9 12.6 3 18 462 477 460 478 0.91 15 20 0.51 7.5e+03 -2.2 1.1 5 10 506 511 506 511 0.89 16 20 2 3e+04 -4.9 10.9 9 19 524 534 516 534 0.87 17 20 0.11 1.6e+03 -0.0 6.5 3 11 547 555 546 556 0.88 18 20 3.1e-06 0.046 14.4 4.9 1 12 617 628 617 628 0.97 19 20 0.016 2.4e+02 2.6 17.3 3 19 657 673 656 673 0.92 20 20 2.3e-06 0.034 14.9 13.5 1 16 724 738 724 744 0.87
Sequence Information
- Coding Sequence
- atGAATCCATGGAAAATACCTCAGCAATCTGAACCAAAACAAcagcagaaaaataaaaaacaaaagaagcaTCTTTCGGAGAAAGAAAATGGACAAAAAGCCCTAAAGAAATTCGAGGAGGCACATtcgaaaaatgtggaaaagGCCAAAGCATACACCGAACAAATTGATTCGAGCTCTGAAGAAGAGGAAGATTTGAACTCAAATGATATTTTAGACAATTTAGTAAGGAGTTATTCGGGCGGAACTGATTGCCTTTTAAAAACCCAAAGTTTTCTTGAGAATTTTCTTCAAGCTGCCTCCGTGGTGTGCTTGATTTGCATAGGCACTATAAGACGTATAGAAgcgATTTGGTCCTGTCAAAATTGCTATTGCTTCTTTCACTTGCAATGCATTAGAAGGTGGGGAAACGACAGTATTTCTCAGCAGAAACTTCGATCTACTGATGAGCAGGGTTACTACAACAACTTGGGAGAATACATCCcgaaaaaactgaaatcaattcAATGGTGTTGTCCGAAGTGCAGAAAAGAATACTCACCAGAAAATATTCCTAGGATATACACTTGCTTCTGTGAAAAGGCAGTGAATCCTCCGTTCCATCCGTGGATATTGCCACATTCGTGTGGCGAAATTTGCGAGAAGTATCTTGTTCCAGATTGTGGACACCAATGTGTTCTCCTTTGCCATCCAGGTCCTTGTCCACCATGTCCGCAGACTATTTCAATTTCGTGCAAATGTAGACAATCTTCTCCGAAGTCCATTCGATGTTTCACGAAATCATGGACTTGTGACCGCAAATGTCAGAAATTGCTCTCCTGTGGGATTCACAAATGTAATCAAGAATGCCACGAGGAAGGGAAGTGTCCTCCTTGCATTAAGAAAAGTAAACAGAAATGTAAATGCGGGGCTGAAACATCTGAAAGAAATTGTTCCGAGCGGTCATGGCAATGTAAAAAGGTCTGCAATAAAACCCTCAGCTGTGGACTTCACAAGTGTAGAAAAGTATGTCACGACGGTGTTTGCGGCGATTGTCCTATGGGACTGCCGAGAGCGTGTCCTTGTGGAAAAAATaaaactGTTGCGCCATGCACTGAAAATGTAGGTACTTGTGGAGATACCTGCCAAAAACAACTCGCTTGTGGGCTCCATCACTGCGCCCTAAGATGCCACAAAGGTGAATGTAGTCCGTGTCTAACAATAATTGAGAAGAAATGCCGTTGTGGCTTGCATTCGAAGGAGCAGCCTTGTTCGAGAATCTACACTTGTGAAACGAAATGCAAGCAAATGAGGGATTGCGGAAGACATTTATGTAACAAAAAGtgcTGCGATGGCCAGTGCCCACCATGCGACAAAATATGCTCCAAGCTGCTATCTTGTAAAAAGCACAAGTGCAAATCCGTTTGTCATGACGGACCATGTTACCCGTGCGAATTGAAGGCGCAGGTGAAGTGCAGATGTGGACTTGCTGTTATTATTGTCCCTTGTGGACGGGAGAAAAAGACACGTCCTCCTAGATGCAGTCAGCCATGCAGAATTCCATCAAGATGTCATCATCAAAATCCGCATCGATGCCACTGGAACGCATGTCCGCCTTGCACGCAGAtatgcaatttgaaaaatgatgtTACCAATTGCGAGCATCCCTGCCAAGCCAGATGTCACGTCGCTATAACGCCTTTCACACTTACAAATCAAAAGaTCGAGATGAAGGGGGGCCTTCCTCATCCCTGGAAATGTGAGGTACAAGTACAAGTAACTTGCATTGGAGGGCACGAGACTGTCATGTTACCGTGTTGGATGTCGAAGCCCCAATCTTGTCAGCGCGATTGTGGGCGTTCACTAAAATGTGGAAACCACAGTTGTCCGGCTGTATGCCATTCTGTTCCTGACGTGAACAACAAGAACgAACAGGAGGGATGTAAATCGTGTGAAAAGGGCTGTGAAATTCCACGACCATCTGGATGCACCCATCCATGTAAAAAGCCCTGCCATTTGCCACCGTGTGAACCTTGTTCTACAACTACAAGAACTAAATGCCACTGCGGTCTCAATCAGGTCTACTACAAATGTGAGGACTACTTTAGAGAAGATATGGATGAGACGCATCTTCATTTGCATcaggaaaatttgaaaagctgTGGAAATCGTTGCATCAAAAATTATCCGTGCGGTCATAGATGCACTTCGATTTGCCACCCCGGAAAGTGTCCAGACCCGGAGAAATGCAAGAAAAAAGTGAAAGTATATTGCGAATGTAGAAATCTTAAAGCAGAAATCAGTTGTGAAAAATTCCGAAATGGTTACGAAGTTCTTCCTTGTGATAGCAATTGCGAGGGGAAGAAGGAGATGGAGGAGCGTATTAAACGAGAAGAGGAGGAAAAGCAGCAAAAGGATGAAGAGGAAAGAAATCGACTGGAATTggagaaatttgaaaagaaatttggaAAGAAAAAGCCTCGTGAAAGGCGATTGCGggaaaatgttgaagaaaAGGGAAATCATTTGTGGACCTGGCTGGCATGCGCAGTTGCCGTTCTTTTGAtagcaattgttttttacgTCTTCTACTACtag
- Protein Sequence
- MNPWKIPQQSEPKQQQKNKKQKKHLSEKENGQKALKKFEEAHSKNVEKAKAYTEQIDSSSEEEEDLNSNDILDNLVRSYSGGTDCLLKTQSFLENFLQAASVVCLICIGTIRRIEAIWSCQNCYCFFHLQCIRRWGNDSISQQKLRSTDEQGYYNNLGEYIPKKLKSIQWCCPKCRKEYSPENIPRIYTCFCEKAVNPPFHPWILPHSCGEICEKYLVPDCGHQCVLLCHPGPCPPCPQTISISCKCRQSSPKSIRCFTKSWTCDRKCQKLLSCGIHKCNQECHEEGKCPPCIKKSKQKCKCGAETSERNCSERSWQCKKVCNKTLSCGLHKCRKVCHDGVCGDCPMGLPRACPCGKNKTVAPCTENVGTCGDTCQKQLACGLHHCALRCHKGECSPCLTIIEKKCRCGLHSKEQPCSRIYTCETKCKQMRDCGRHLCNKKCCDGQCPPCDKICSKLLSCKKHKCKSVCHDGPCYPCELKAQVKCRCGLAVIIVPCGREKKTRPPRCSQPCRIPSRCHHQNPHRCHWNACPPCTQICNLKNDVTNCEHPCQARCHVAITPFTLTNQKIEMKGGLPHPWKCEVQVQVTCIGGHETVMLPCWMSKPQSCQRDCGRSLKCGNHSCPAVCHSVPDVNNKNEQEGCKSCEKGCEIPRPSGCTHPCKKPCHLPPCEPCSTTTRTKCHCGLNQVYYKCEDYFREDMDETHLHLHQENLKSCGNRCIKNYPCGHRCTSICHPGKCPDPEKCKKKVKVYCECRNLKAEISCEKFRNGYEVLPCDSNCEGKKEMEERIKREEEEKQQKDEEERNRLELEKFEKKFGKKKPRERRLRENVEEKGNHLWTWLACAVAVLLIAIVFYVFYY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -