Lcyl002298.1
Basic Information
- Insect
- Leptogaster cylindrica
- Gene Symbol
- pnr
- Assembly
- GCA_963082835.1
- Location
- OY720105.1:11767405-11774418[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6 7.7e+03 -2.7 0.1 22 28 130 136 127 137 0.68 2 2 7.5e-17 3.7e-13 49.5 3.8 1 35 570 603 570 604 0.98
Sequence Information
- Coding Sequence
- atgtgTAATGTACCACCAAAATTCTACCAAGTTTGCCGTCTGTGTCTGTCAGTGGTTAGTGATtgtgattttgaaaagttatCAATTTTCACACAAGCACCAAATTCTGATTTAGTatcagataaaaaaatactctCGAATAGATTACCTGGATTATATTCGTCGAACATAAACCCGGATGAAAATCGTTCAAGTGATAAAGAGGGAGCTCACATTGAAGCAACAGATTTTAAAGCTTTTAGCGCTCCCATCAAGCAGAAGACGTCAGACGATTTCATCGGTGATTGCGAAAGTGTTGGAAGCTATGATTCATCAAACACAATTCCTGAGCGAATATTTACTTGCCTCTCAATCAAGgTATCTTCAGAAGATGGTTTACCTTCCGTGGTTTGTGACAACTGCAGAATCCAGCTGGACTCCTGTTATAGATTTCGATCGATGGCGacaaaagcacaaaaaatgttacaaaacTTCTTACAATACGCTTCCAGGTTATCAGGAAATCCAGAGgaaattgcaataaaatccTGCAAGACCTTAGATGAACTTCTTGCGTTATCAAATGTTCGAGAAGCATCTGAAAGGATGGCAGCTACAGCTTTAACAGAATTAAGCAacacaacaaacaacaacaaactaGCATCAAATTGCtttacagaaaaattatgcaaacCATCAACAATATTATCAGTTACCTCCTCCTCAATAAATGAACATCCTTCAGGAGATTTAAAGCAAAATGTAATATCTGTGATCCCAATTAATAAAGGTGTAGTAGATTCCAGTGTTTCATGTTATGATTACAAAACAAGTAAATCAGAAATGCATTCAAgctcaaataatttaaatatacattcGCTAAAGAATTTCACCCAACTACAGCAACAATTAGAGACAGCTGCTGTGTTAATGGATATTagtaaaaaagttattatatcCCCACCAAGCTCGAATCCTCAATCACCAAGTCTTTCAACTGCGATCGATTCAAGTATTAGTAATTCTGTGATAAACATTAAACGCTCAATCAGCAACGAGGAAATTGATTTATCTGTAAAACGTAGACGAACTGAACAGGTTGGCAATAATGATGAACAATCAGGAACATCAAGGCTtaatataaaaactgaaaatagcACAGAAAGTTTGTCCAATGATAGTTCAGATTCTGGGCGTTTACAAGTGGACGTATCATCGCAAGGAGTAGACGACTTTTTATTTGAGAAACCAGGATTCTCATCGAATGCAGGAAGTGATCCAGGTAGAGAAACACCAGATAGTATAGCTTCTGAAGATCATCGAACAGATCCAACGACAACTCAACTATGGCAGGCATTGGCACACACTGCAGttAACGGAAGTGGAAATGAAGCATCACAATTGTTGAGACGAATGATCAATTGTCGAACATTTGGGTTACCCTTAACAACGACTCTGGAACTACAGTCGAGCAACCATTCAATAGATCAACCGATCGCTTTACTGAAGAATGATGTAGCTGGAGACTATGCATCTGGAAAGCAAGGACGACGAAAACAAGCATGCCCTAGTAAATCGAATCACACAGAAATAATGGACACAAATTGTCTTGAAGAGTCAAGTCCAATCAATGACACCTCGGCAGGAAACACGTCTCAAGTTTCAAATCCTGAAGACAAATTCAAAgtaaaaaattcatcgtCAAATAATCCACAAAAAGACATGTCTTGCACTAATTGTGGCACTCTTACAACAACGATTTGGAGACGAAATGTTCGAGGGGAAATGGTGTGCAATGCTTGCGGCTTATACTTTAAATTGCATGGAGTAAACCGTCCCCATTCGATGAGGAGGGACACAATTCACACAAGAAGAAGGCGACCAAAAGGCAGCGAAAAATCCAGTAGAAGGaAAAACAAGGAGTCAAAGCATATGGAGAGTGACCATGAACATGGcgagaaaataaaatcagaagtGCAATCCCTGCCAAATCATAACTTTTTAATGGCCTTAGGAAACGTGGCTGCTCATAATGCAGGAAATCCATTTCCAATGCCtcACTATTCACACTTTTTACGTGCCTCACAAAACTTTGCTGAAAATGATATACAAACTGAGCCCGTTCACGACGATCGAACAGGCAACCGAAATGACGACAGCAATCATACAAATGACACGGAAACTTGTAGCTTGCCTTTGAATCTCGCTTCTAATGAAGGAGTTACCAATGAATCATCCTTAAAGTAA
- Protein Sequence
- MCNVPPKFYQVCRLCLSVVSDCDFEKLSIFTQAPNSDLVSDKKILSNRLPGLYSSNINPDENRSSDKEGAHIEATDFKAFSAPIKQKTSDDFIGDCESVGSYDSSNTIPERIFTCLSIKVSSEDGLPSVVCDNCRIQLDSCYRFRSMATKAQKMLQNFLQYASRLSGNPEEIAIKSCKTLDELLALSNVREASERMAATALTELSNTTNNNKLASNCFTEKLCKPSTILSVTSSSINEHPSGDLKQNVISVIPINKGVVDSSVSCYDYKTSKSEMHSSSNNLNIHSLKNFTQLQQQLETAAVLMDISKKVIISPPSSNPQSPSLSTAIDSSISNSVINIKRSISNEEIDLSVKRRRTEQVGNNDEQSGTSRLNIKTENSTESLSNDSSDSGRLQVDVSSQGVDDFLFEKPGFSSNAGSDPGRETPDSIASEDHRTDPTTTQLWQALAHTAVNGSGNEASQLLRRMINCRTFGLPLTTTLELQSSNHSIDQPIALLKNDVAGDYASGKQGRRKQACPSKSNHTEIMDTNCLEESSPINDTSAGNTSQVSNPEDKFKVKNSSSNNPQKDMSCTNCGTLTTTIWRRNVRGEMVCNACGLYFKLHGVNRPHSMRRDTIHTRRRRPKGSEKSSRRKNKESKHMESDHEHGEKIKSEVQSLPNHNFLMALGNVAAHNAGNPFPMPHYSHFLRASQNFAENDIQTEPVHDDRTGNRNDDSNHTNDTETCSLPLNLASNEGVTNESSLK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -