Lcyl013499.1
Basic Information
- Insect
- Leptogaster cylindrica
- Gene Symbol
- pnr
- Assembly
- GCA_963082835.1
- Location
- OY720107.1:5716826-5718755[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.4 1.2e+04 -3.3 0.5 1 7 319 325 319 331 0.80 2 3 1.3 6.6e+03 -2.5 0.4 1 7 336 342 336 343 0.87 3 3 3.3e-18 1.6e-14 53.8 7.4 1 35 371 404 371 405 0.97
Sequence Information
- Coding Sequence
- ATGGAGCATCAGGAGCAAACGACACAGATTCAGGATTCAGGGGAGACAAAAGTTGAGCAATCTTTAGCACCAGATGAATCTCCtcagcaacaacagcaacaattgCAAGGGAATCAACAGGCAAATCAGGATTTATTGGATCAGCCATCAATACCTCGAACTGTGATCACAGGACAGAGAAGGATTCTAACGACCGCGGGAACTGTGAGagaagTGAATGATCAACAGGATCTAGATTCTGAAGATTATCAAACATCAGACATTCTAACGATTGTTCCAAGAACCGATGAACAAGTTTATGATAGTTACGAGAATTCTTCTCCACATACAATCATTGTCTGTGACAATCAAGGCATCAAAAATGATGTTTCGGACAAGGACAGTGAACAAAGGACATCTTCATCGGCGTTTCACGATTTAACTAATTCGGTGACAGTTGGAATTCGAACTCAGGATGGCGGAGATCCTCATGTACGATATGAAAATCAACCTGACACAAGATATCATATCCCGAGTACAGACCAAGCGCCGGTTTATTTTACGGAGATTCGAACGAATGGCGGAGTTGCATCCTTAAATCCAGAGAGCCAAAGTGAACCGAGAACATTCACAAATCTTGGAAGCATACCATCAATGTCTAACTCAGAGTATGTAACGTCGGCAAGTTCTAGCAGTTATGCACACGGAGGAGGATTCTCTTTCGCTCCAGGACCAATTTACAACGGAGGCTCTTCGAATGCCATCCTCCTACGAAATGATCCGACTCTATCTTCTGTTGTGCGACAAAGCAATCATCCAAATGTCCATAGTTTTTCCACATACGAAAATCCAGGTGTTGGATTGGACTCTAATCAATGGAATACACCGTTTTTTGATATGCAAaatttcaataatacaaaTCCGGAAGAAGCCAATGTCCATTGGACACCATTGGAAAGTGCTCAGGATATCCGATGTGCGACATGCAATTCGAATTTTGTTCGAAGGGACAACGGTGAATTTCATTGTGTTTCTTGTTATACAAGTCGTGTTGCAGCAACACGAATTCAGTCACGTCCAACTAGGCCGCGAAATGCAACATCTTCGGGTACTCGACGAAATGGAGTGATATGTGCCAATTGtaaaacatcaacaacaacattgTGGCGTCGAAACAATGAAGGTCAACCGGTATGCAATGCATGTGGATTGTACTATAAGTTGCACAATACACCGAGGCCGGCAAGCATGAAGAAGGATGGAATTCAGAAGAGGAAACGTAAACCAAAGAACAATGGCGGTGTACAAATGAAGTCACCACTTCCAAGTATTTCAGCATATTCTGATCAGTTGCATACCCATGCCCAAGCATTATTTCCATCTCACGGTGATATTATAATGTCAACCGGTGTTAGTCATGttgaaatgttacaaaatcctcatatacacaatctcaatttggCTAGACATCAAAATGTAATTGTAACAAGTGAAGCACATTTAGCGAATCATTACAGTAATCGTGAACCATCGCAAAGTCATTCACCGCAATTACCAAATTCAACAACATTGAATCGACAAATAACCCAAACAGTGCCACCATTAGATGGAGATAGGAGCGCAAACGGTGAGATAGCTCTAAGTGTAATTACAAGTACAGCTGGTGATGATCATGCAGGAAATCATTGA
- Protein Sequence
- MEHQEQTTQIQDSGETKVEQSLAPDESPQQQQQQLQGNQQANQDLLDQPSIPRTVITGQRRILTTAGTVREVNDQQDLDSEDYQTSDILTIVPRTDEQVYDSYENSSPHTIIVCDNQGIKNDVSDKDSEQRTSSSAFHDLTNSVTVGIRTQDGGDPHVRYENQPDTRYHIPSTDQAPVYFTEIRTNGGVASLNPESQSEPRTFTNLGSIPSMSNSEYVTSASSSSYAHGGGFSFAPGPIYNGGSSNAILLRNDPTLSSVVRQSNHPNVHSFSTYENPGVGLDSNQWNTPFFDMQNFNNTNPEEANVHWTPLESAQDIRCATCNSNFVRRDNGEFHCVSCYTSRVAATRIQSRPTRPRNATSSGTRRNGVICANCKTSTTTLWRRNNEGQPVCNACGLYYKLHNTPRPASMKKDGIQKRKRKPKNNGGVQMKSPLPSISAYSDQLHTHAQALFPSHGDIIMSTGVSHVEMLQNPHIHNLNLARHQNVIVTSEAHLANHYSNREPSQSHSPQLPNSTTLNRQITQTVPPLDGDRSANGEIALSVITSTAGDDHAGNH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -