Lcyl012101.1
Basic Information
- Insect
- Leptogaster cylindrica
- Gene Symbol
- grn
- Assembly
- GCA_963082835.1
- Location
- OY720106.1:33231730-33233340[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-20 1.2e-16 60.7 3.5 1 35 80 113 80 114 0.97 2 2 0.055 2.7e+02 2.0 0.2 6 26 115 135 114 142 0.73
Sequence Information
- Coding Sequence
- ATGATCGCGCCACAGACTGGTGAACATTCGGGGGCCGCCGATATGCCAGGGTATCGTAATCTGCACTCCCAGCCTCCGGGTCCCAGGGACTGGAGCAGTGGTGCTCCCTTCATCGTTGTCGTTTTGACGACTTTCAGATATTTCTGCATCTATACGTCTTTTTACCATACTAATAAtccatttccttttttgaCTTTGCAGTCACTCCAAAGCGCTGCCAAAAGAGCGGGGACATCGTGTGCGAACTGCAAGACAACAACGACAACCCTTTGGCGGCGGAACGCCAGCGGTGAACCAGTGTGTAATGCCTGCGGTCTCTACTATAAATTACACAATGTAAGTACAATTGAATCCTTTTGCCTTCGCAATCATGGAAATCATATTGAGTTTCTGTGCACATTCTGTTCAGAGGCCACAACAAAAGTTTCCACAATTCCATGTGTTTTGCCATCGTTCCCCACCCTCTCATCCTTGGCGCTGAGAGGGCAACAAAGATTTATCGCAGGAGCAAATGGTCGTCAGGAAGTGCTTCTCACccatttcatttttgtgcTTGTCTTACTTGTCCACTTTATGCACCCCGAACTGGGCGGAAATCCGAAACAAGGGCGCTCTGTATCACACCAACCGACCCCCGAACTAAGTTGTTGGGGTGGCTAG
- Protein Sequence
- MIAPQTGEHSGAADMPGYRNLHSQPPGPRDWSSGAPFIVVVLTTFRYFCIYTSFYHTNNPFPFLTLQSLQSAAKRAGTSCANCKTTTTTLWRRNASGEPVCNACGLYYKLHNVSTIESFCLRNHGNHIEFLCTFCSEATTKVSTIPCVLPSFPTLSSLALRGQQRFIAGANGRQEVLLTHFIFVLVLLVHFMHPELGGNPKQGRSVSHQPTPELSCWGG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -