Lcyl012331.1
Basic Information
- Insect
- Leptogaster cylindrica
- Gene Symbol
- Mblk-1
- Assembly
- GCA_963082835.1
- Location
- OY720106.1:35146045-35158496[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.8e-15 1.4e-12 47.8 0.1 1 45 306 351 306 351 0.95 2 2 5.1e-18 2.6e-15 56.5 0.0 1 43 737 780 737 782 0.95
Sequence Information
- Coding Sequence
- ATGGGACGCAGGAAATGGAAGCTCTACCAAGAAGTTCTTGCACGATCCCAATTGAATGCGAACAGTACGAACTCAGCTCAAATCGAAAATACAAGCCACAGCAGCAAAATTCTTCCACTGCAACAGCCAGAGAAGGAAAATTTGGCTTTGCAACAGCAAGCCTCCGTGGAAAACCACTCAAAGGGGAGAGAAACTCCTGCAATAAAAAGCGAGATAAGAGAAAACCTGGAAGACAAAGGCTGTGTAATTTTACCGAAAGaagaaaaattggaaaccGACTCAAGAGGTAATTCTTCAAGCATCACGTCAGAGAGCAGCGAGCGGCCAGTAACTCCCATTGACTGGAAGCCAGACGAAAAGTGTTATTTCTGCGTTGACGGGAAGCTCCTCACGGTGAACGAGAAAGGCGATTTAGTGGCGGAGTCTGGCCCGGCATCGTCCGAGGCAGAACTCGCCAACAGAACGTCTATAGATTCGGATACGGATTCCAGGGACAGCTCTCCTGATCTAGAGCTCCATAGTCAGAGAAACATACATGTGAACAAAAGTGTGACATCACGTTCAAGAGATTCACAACCACCGAATATGACATCCTTTGAGTCAATGGCTGCACATTTGGCGGCTGTTGCCTCAATTTCCGGATTTCAGTCTGGTCTAGGTCCATTTTGTCCAAGTTTATGGTATCACCAGTTAACTCAACAAGTAACATCAGCTTCAGCACCTACCTCAGAGACACCAGCTGCCCAAATTAGTCCTCCAATCAAAGACTCACCTAGTCCCAGTGATGTAACAGGTGAACAACCGCTAGATTTAAGTGCAAAACCATCGCCGAACTCGTCGTCAGCATGTGGCGATCCGAAACAGGTATTCAGAGCAAAGCCTCGTATGTCAGCGGTGACAGGACGACGTACCTACACCGAAGAAGAGCTTCATAGTGCTTTGCAGGATATAATAAGCGGAAAGTTGGGGACACGGAGGGCAGCTGTTCTATACGGAATTCCTAGATCAACGTTACGAAACAAAGTGTACAAGATCGCAATGGAACAAAAACGTGAGGCTCATTCGTTACATCCGCCTAATCTTGAAGAACTCGTTGATGCTGATGACGAAGACAAAGAGCTTTCTGGTGATGAAGACAAAGATGAAAAACTATTAGCCACAGCATTGCAACAAGAGGATCTTGCCAGATTTACAACATCACAATTAGCAGCCGCCGCCCttcaaaaaatcaccaaaGGTTGTGAAAGTAATCAAACAGACATCAAACCTTCAACATCACTGGATGCACAATCGAAAATGCCTCCAACAACGCCCACACCACAAACACCACCAATCACACCGAATCCCTGGCTAGATCCCAACGTGTTGCTCCAGAGTCTACTCCTAACAGGTGGTCTGGGTGCTCTACCGGGGCTGATGCAACCCAAAGTGGATGATCCAGCTGCATTCCGTGAATTGTTCAGCAATCTGATGATCCAGCAGGAAGAAATATTGAAGGAGCAAATGAAAAACTCTGCATCGTCTAGTGATGTGCTGAACAATGGCAAGCCAATGCTTGATCCTAGAATACTTATGCAGAATTTACCCTTGCtgcagcaacagcagcaacagcaacagcaTCAACACTCTCCGTATATGTATCAAAATCGTTTACCAAAGTCTGAAACGCCAGAGACTAGCTCGTCTGTTGACATTGTCGAGGGCAGTGATGATCCttcagttattttaaaaattccgtCCTACAAGCCGGTAGCTGGGTCCTCGTCTTCAGGCAAAAACGGGGAGCATTTAAGTTCTCCCGTGCCACCGACCACCGCTCCCATACTATCTCGTAGTCCGCAACAACCAAATAATTTACCTGGGATATCGCCTCCATTAATAAGACAAAGCAGCGAATCGCAATCACCACCTATTTTCTCTCTAAGGGATGTTATTGCGAACAGCATCAGTCGAACGTTCAATCAGCAGGCTGCAAAGGAGTCGGGTGCTGTGAAGACAGCGTCATCTGTGGAGAGCATGGAGCAGCAGAAACGCGCGAGCATATCAGTGATAAAAAATCTCGGTGGGACAGATATATCCAGATTTGCTGCAACACCCAATCTACTTAGCAGTAACAGCAACAATTCAGCATCCCAGAATGCAGCAAACACTAGCGGGGGTGTTGGCGGTAAAGGTACAAGACCAAAGCGAGGCAAGTATAGGAATTATGATCGCGATAGTTTAGTGGAGGCTGTTAAGGCTGTCCAGCGTGGCGAAATGTCAGTTCACAGAGCTGGAAGCTATTATGGAGTACCTCATTCAACTTTAGAGTATAAGGTGAAGGAGCGACACTTGATGAGGCCAAGGAAGCGAGAACCAAAACCACAACCTCTTGACGATCGGGCAGGGAGTAGTAGTTCTAGTTCAGTAACTTCGAAAAACACAAGCATTCCAGGTATTGCGGCTGTTAGTAGTttagataaaataaaaccatcgCTAGCTGCACAAAAGCCAGCTTTGAAAAACAACCCACCATTCCCGAGCACATCACCAAACGGCATGAAGGTGCCAATATTTGACCCCACAATGGCTGCCCAATTGCAGTACACACAACATCTGTTTTGGCCCCATTCAACGGGTTTCAGTGCACTGCCGATGGAGTTTCCAAGGACTCCGGGTGGTTCGACAGGACCTCCTGCATTTCCTCCGAACACGGAAGGCTTCCTTGCCTCTCAAATGATCCAGAGATTTCACGAGGAGTCGAACCGGCTGAGTGGTAGTAATATCAGTACAACCAATACCACCACTTCGACGCCCATTGCTAGCAACAAATTTAGTGCAAACAATGCTAATGCACCAGCGAAAAGCACCCGTGAAATCGCCGAAAGTCTGTACGACAATGGCGGAGCAAATGGATCATTTTTGGACGGGATAATTAGGAAAACACTGGATCGTAAGCCGGTGGACATACCGCACGGTGCCCTAATAGATCAACTTGTGAAAAATACACGAACGCCAATTCTAAGTAGTAATAGTGACCAATTAACAAACGCAAAGACCAAAAGGCCTGCCAGCCCCGTTACATTCCCTGTGATCGACATCAAGCGCGAGCGAGCAAGTCCAACAACATCCATCTCATTCGACACGGATCGCACTTCAGTAGAACCAGACATATCAAAGGAATCGGCTGAGAGTCTAGTGAAGATGCGAGATGGCCGCAGCATAAAAATGGAGGATCCACAATCTTTGCATCAAGTCCACCATTCTTCCATGCACCGTCAGCAATCTCAACATCACCATTCCGTTACCGGGAATGTTCGGCCGCTGTCGATCGAGGATCTCAATGGCAGCAGCGCCGGCCTACACGAGAAGATAGGGCAAATCAAGTCTGAAAAGGAAGACATTTTATAG
- Protein Sequence
- MGRRKWKLYQEVLARSQLNANSTNSAQIENTSHSSKILPLQQPEKENLALQQQASVENHSKGRETPAIKSEIRENLEDKGCVILPKEEKLETDSRGNSSSITSESSERPVTPIDWKPDEKCYFCVDGKLLTVNEKGDLVAESGPASSEAELANRTSIDSDTDSRDSSPDLELHSQRNIHVNKSVTSRSRDSQPPNMTSFESMAAHLAAVASISGFQSGLGPFCPSLWYHQLTQQVTSASAPTSETPAAQISPPIKDSPSPSDVTGEQPLDLSAKPSPNSSSACGDPKQVFRAKPRMSAVTGRRTYTEEELHSALQDIISGKLGTRRAAVLYGIPRSTLRNKVYKIAMEQKREAHSLHPPNLEELVDADDEDKELSGDEDKDEKLLATALQQEDLARFTTSQLAAAALQKITKGCESNQTDIKPSTSLDAQSKMPPTTPTPQTPPITPNPWLDPNVLLQSLLLTGGLGALPGLMQPKVDDPAAFRELFSNLMIQQEEILKEQMKNSASSSDVLNNGKPMLDPRILMQNLPLLQQQQQQQQHQHSPYMYQNRLPKSETPETSSSVDIVEGSDDPSVILKIPSYKPVAGSSSSGKNGEHLSSPVPPTTAPILSRSPQQPNNLPGISPPLIRQSSESQSPPIFSLRDVIANSISRTFNQQAAKESGAVKTASSVESMEQQKRASISVIKNLGGTDISRFAATPNLLSSNSNNSASQNAANTSGGVGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPLDDRAGSSSSSSVTSKNTSIPGIAAVSSLDKIKPSLAAQKPALKNNPPFPSTSPNGMKVPIFDPTMAAQLQYTQHLFWPHSTGFSALPMEFPRTPGGSTGPPAFPPNTEGFLASQMIQRFHEESNRLSGSNISTTNTTTSTPIASNKFSANNANAPAKSTREIAESLYDNGGANGSFLDGIIRKTLDRKPVDIPHGALIDQLVKNTRTPILSSNSDQLTNAKTKRPASPVTFPVIDIKRERASPTTSISFDTDRTSVEPDISKESAESLVKMRDGRSIKMEDPQSLHQVHHSSMHRQQSQHHHSVTGNVRPLSIEDLNGSSAGLHEKIGQIKSEKEDIL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01256331;
- 90% Identity
- -
- 80% Identity
- -