Basic Information

Transcription Factor Domain

TF Family: zf-GATA
Domain: zf-GATA domain
PFAM: PF00320
TF Group: Zinc-Coordinating Group
Description: This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 8.5e-18 3.2e-14 53.4 3.7 1 35 20 53 20 54 0.98

2 3 7.4e-06 0.027 15.2 0.1 24 35 99 110 99 111 0.93

3 3 7.4e-06 0.027 15.2 0.1 24 35 175 186 175 187 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	8.5e-18	3.2e-14	53.4	3.7	1	35	20	53	20	54	0.98
2	3	7.4e-06	0.027	15.2	0.1	24	35	99	110	99	111	0.93
3	3	7.4e-06	0.027	15.2	0.1	24	35	175	186	175	187	0.93

Coding Sequence: ATGTCCGGCGTGGCGAGCGCCCGCGGCGGGCCGGGCGCGCCCCGCGTGGAGCTGGCCTGCACCAACTGCGGCACACACACCACCACCATCTGGCGGCGGGACGCGCGCGGAGAGATGGTGTGCAACGCGTGCGGCCTGTACTACAAGCTGCACGGCGTGCCGCGCCCCACGGCCATGCGGCGCGACACCATCCACACGCGGCGCCGGCGCCCGCGCCACGAGCTCAAGACCTCGCGCTCCCGTGAGTACACTCTTATAGAGAGCCCGCTCTACACTTATCCGCGAGATGGTGTCAACGCGTGCGGCCTGTACTACAAGCTGCACGGCGTGCCGCGCCCCACGGCCATGCGGCGCGACACCATCCACACGCGGCGCCGGCGCCCGCGCCACGAGCTCAAGACCTCGCGCTCCCCTGCACGGCGTGCCGCGCCCCACGGCCATGCGGCGCGACACCATCCACACGCGGCGCCGGCGCCCGCGCCACGAGCTCAAGACCTCGCGCTCCCTCCGCGAGATGGTGTCAACGCGTGCGGCCTGTACTACAAGCTGCACGGCGTGCCGCGCCCCACGGCCATGCGGCGCGACACCATCCACACGCGGCGCCGGCGCCCGCGCCACGAGCTCAAGACCTCGCGCTCCCGTGAGTACACTCTTATAGAGAGCCCGCTCTACACTTAG
Protein Sequence: MSGVASARGGPGAPRVELACTNCGTHTTTIWRRDARGEMVCNACGLYYKLHGVPRPTAMRRDTIHTRRRRPRHELKTSRSREYTLIESPLYTYPRDGVNACGLYYKLHGVPRPTAMRRDTIHTRRRRPRHELKTSRSPARRAAPHGHAARHHPHAAPAPAPRAQDLALPPRDGVNACGLYYKLHGVPRPTAMRRDTIHTRRRRPRHELKTSRSREYTLIESPLYT*

Sequence clustering based on sequence similarity using MMseqs2