Lsin005325.1
Basic Information
- Insect
- Leptidea sinapis
- Gene Symbol
- GATA-B
- Assembly
- GCA_905404315.1
- Location
- FR990156.1:1388004-1393284[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.6e-18 9.6e-15 55.0 3.5 1 34 11 43 11 45 0.97 2 2 6.5e-19 2.4e-15 57.0 7.2 1 34 81 113 81 115 0.97
Sequence Information
- Coding Sequence
- ATGGCGGAGCTGCTGACGGAGGGCCGCGAGTGCGTCAACTGCGGCGCGATCAGCACGCCGCTGTGGCGCCGCGACGGCACGGGCCACTACCTGTGCAACGCGTGCGGCCTCTACAACAAGATGAACGGCATGAACCGGCCGCTGAAGCAGTCGCGGCGGCTGGTACGTCAGCGGCACGCGCCGGCCccgcccgcgcccgcgccctCGCTCGACATGGGCACGAAGCGGCCTGGCATGGAGTGCAGCAACTGCAAGACAACCACCACATCGCTGTGGCGGCGAAATGCGCACGGCGAGACCGTGTGCAACGCGTGTGGTCTGTACTACAAGTTGCACAACATCAACCGACCGCTTGCCATGAAGAAGGACTCCATTCAGAGTCGGAAACGTAAACCGAAAAACAGTTTAAAGGCGGAGCGTGCTCTCAGCAAGAGTATCACGCACACCACGCACGCGACGCATTCGACGCATGGGACGCGCGTCGCGCACGCTCTCGGGTCAGCGGTTAAGATCGAGAACTTGTTGGACAACGGCGGCGCGCGCTCGCCGCTGCCGCTGGGGTACTACGTGCCGCACGCTCCGCACGCGGCGCACGCGCAGCACGCGGCCGCCGTCAAGCTGGAGGAGCCGCCGCCGGCGCACGCGCACGGGCACGCGCACGGGCACTCGCTCGCGCACGGGCAGTACTACGAGGACGCGGAGTACCGGCGCGCGACCGACGCGCAGGAGCGGCCCTCCGTCGTGTCGCTGGGGAGCTGA
- Protein Sequence
- MAELLTEGRECVNCGAISTPLWRRDGTGHYLCNACGLYNKMNGMNRPLKQSRRLVRQRHAPAPPAPAPSLDMGTKRPGMECSNCKTTTTSLWRRNAHGETVCNACGLYYKLHNINRPLAMKKDSIQSRKRKPKNSLKAERALSKSITHTTHATHSTHGTRVAHALGSAVKIENLLDNGGARSPLPLGYYVPHAPHAAHAQHAAAVKLEEPPPAHAHGHAHGHSLAHGQYYEDAEYRRATDAQERPSVVSLGS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -