Lsin011572.4
Basic Information
- Insect
- Leptidea sinapis
- Gene Symbol
- myt1
- Assembly
- GCA_905404315.1
- Location
- FR990163.1:3367820-3384573[+]
Transcription Factor Domain
- TF Family
- zf-C2HC
- Domain
- zf-C2HC domain
- PFAM
- PF01530
- TF Group
- Zinc-Coordinating Group
- Description
- This is a DNA binding zinc finger domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 1.8e-16 1.5e-12 48.5 8.8 1 28 346 373 346 374 0.97 2 6 1e-16 8.4e-13 49.3 7.8 1 29 390 418 390 418 0.97 3 6 3.5e-18 2.9e-14 53.9 2.7 1 29 837 865 837 865 0.97 4 6 1.3e-18 1e-14 55.4 8.3 1 29 878 906 878 906 0.98 5 6 7e-17 5.7e-13 49.8 5.2 1 29 923 951 923 951 0.97 6 6 4.1e-18 3.3e-14 53.8 5.4 1 29 985 1013 985 1013 0.97
Sequence Information
- Coding Sequence
- ATGAATACGTTTTCGGCGTTACctcaaataaacaaaagaagATTTGAATTTGGAGTTGATGTTGAAGCATTTAGAATAATTGATAGGCAACATAATCTGGGAACTTCTGAAGAGTCGATGGAAGACGAAGCCGTCGTCAAGCGGCGTAGGCGACTACTAGATGATGAACAGCAAGACAATACTGAGGAACGATGTAGAGTATACAGCACTTCATCGCATCATGACTTTTCTCgtttaaatgtaaatgaaaactATGCACATAGCCACACAATAATGAAATCTACGTCTAGTACATGGCCAGAACATCCATCGCCAGAAAGTGGAGATGAGAATGACGACAACGAGTTTGAAAATTACTTTAGTGATAAGAGGTCTGATAAAATGTTACCGTCTTCCCCTTCGCAATCATCAGAGAGTACTGATGATTCACAAAAAAGCTTTTCATTAAACAATCAATTAAATGAACAGGAAAGAAATGATAATgaagaagaaaatgaaaaagaaaacaatgGGGCTCAACAAAAACCAGATACCGATGGTTACGATGGCGGACATAGAGATAGTAAAAATTGTAATCATTATGACGCAACGCACTTTGATGATCTTGTCGATTCATCATCAAATGAGCTTGAAATTGATATGTCTGACAGAAATGACGATAGGTACGAAGATGAAAAGGATATAATAACAAAACAGAAAGAAATCATGTCTGTTAATAAGCAGACTTTGTACAATGCTTATAAAGCTGCCACCGCGTCGCTGCCTTATTCTACTCAATCAGCATTCAAACCACCGGCTGAAGTGAAGCACAAAATACACACAAATTCATTCCCGAGTGAACCTTTCGGGGGTTATTCGAATGACCACGAGAAGAGCTCCAAAGTGTCAAAGCAGTACACGATACTGCAGCCGGCGGGGCTCGGTTCCCGGGCAGCTTCCGCCCTGCACGAGGCGCGCGCGGTTCCTTCCACACAACCCACACGCGACTCGCGGTCTCTCAACCCACTGTCTCCGACGGCCGCCAGAGAAGGCAACAAGTGTCCAACTCCAGGTTGCAATGGGCAGGGTCATGTCACCGGTCTTTATTCGCACCACCGAAGTCTATCTGGATGCCCAAGAAAGGATAAAGTTACACCAGAAATACTGGCCCTGCACGAGACAATCCTAAAGTGCCCGACTCCAGGCTGCAACGGTCGAGGCCACGTCAGTTCCAATAGAAGCACTCACCGATCTCTCTCCGGTTGTCCGACCGCTGCAGCGCGGAAGGCAGCAGCCAGAACACAGAGAGCCAGACCTATAGTGCTGACAGCTCCAATAGCTGCAGTAGCTACACCTGCGGCCAGTACGCACACGGAGGTCCCGGCTACGCCCCAGAGGAGAGAGCCGGAAGCAGCGGTGTCGCCGCGGAGTCCAGCCGTGAAACACGAGACCCCCGAGCTGCTGGTGCCGAAGCGAGAGGCCGCCGAGCCCGAGCGAGACTCTCCCGCGATGGAGACTCGCCACGCCGGCTACGGTGCGCCGCCGGATCAGAGGTCTCCCTACGAGCGCCCTCCCGACGACCACGTGCGCTCCTACAGCCAAATGAATGAGACTCGATATGGTTATGAGGCCCGATGCTACGAAGGTGCAACAGCCTTCGAACGCTACGACCCCGCCCAGTGCCCGCAGAGACCATACAGCTGGGAGGAGGAACGCTATCACGACCCACATCTCCCCACGCCAATGAAAACAGACCAGTCGGAACTAGAAAGCAACTCCGCACCTATTTATCCTAGAGCCATGTATCACTACGAGGCCGGTGGTGCGGTAGGTGGGGTGGTAGCCTTGCCCCCGGGAGTCCCTCCTGGGTTCTCCGCCATCAATCTCTCCGTGAAGATAGCTGCAGCCCAGGCTCAGCGCCCTCGCACTCCGACCTCCAGGGATCCTCGAGATCCTCGTCCAGCAATAGACCTTTCTTCTTCTGGTGGCAGTCCACAGGGTCCGTATACGTCACCGGTGTACACGAGCGCCGGTGGTGGCAGCGGGGGCGGAGCCCGAGGCAGTCCGCAGCCCGGCGCTTCGCCTCAGCTAGCAGCCAGTCCCCAGGTGCCCAGCCCGCAGGGGCAAACCCTCGACCTTAGTGTCACCCGTTTACCACATAGTCGAGGTTTCCCCGGAGGAGTATCATATAGTCGAGAATCTACACCTGACAGTGGAGGCAGTCACCCTTACCTTGAAGCATATCATCGAGATACAGCTGGTTACGGTGGCGTCAGTCCCCACCCGGTGGCGGGCTACGGCCTGCCGCAGGACTACGCGGCGGCTACGGCCGGCTACGGCGGCTACCAGTACCAGTGCGGGCCCTACCCCCCGCCGCCCGCTTACCCCGCACACGCCCCGCCCTACTCGCCCCCCTGCTACATGCCGCCGCCGCACGCGCCGCATGACAAGCCCAAAGATAGcagctATCAGCGTGACCAGTATTACGGGAAACTGGGTTACCGCGCAAGGGACTCAAGAGATCTAATCCAGTGTCCGGTAGAGAGATGCGACGGCTCCGGCCACATTAGTGGTAACTTCGCCACGCACAGAAGTCTGTCGGGATGTCCTCGCGCCGACCGCTCACAACTGCAGCCACACTCCCAGGAGCTCAAGTGTCCGACACCAGGCTGTGATGGCTCCGGACACGTCACCGGAAACTACTCCTCGCACCGGTCGCTCTCCGGCTGCCCGAGAGCCAACAAACCGAAGAGCAAGCCCAGGGACGGACAAGATTCGGAACCACTCAGATGTCCAATACCGGGATGTGATGGATCAGGACACGCTACAGGGAAATTTTTATCACATAGAAGTGCCTCTGGATGTCCCATAGCAAATCGCAACAAAATGCGAGTGCTAGAAAGCGGTGGTACGGTAGAACAACACAAGGCGGCGGTCGCAGCCGCGGCTTCGGCGATCAAGTTTGACGGTGTCAACTGTCCGACACCCGGCTGTGATGGATCCGGACATATCAACGGATCCTTTCTAACGCACAGATCACTGTCGGGATGTCCAGTTGCTGGCGCGGCAACGCCCACGCCGCAGCCCAAGAAGGCCAAATACCCGGATGATATTACTCCCCTCTACCCAAAGCCGTATTCAAGTATGGACATAAACATGCAGACAGGCAACGGCGAGGACCTGATGACATTGGAGCAAGAGATTACTGAGCTACAACGAGAAAACGCACGCGTCGAGTCTCAAATGATGCGTCTCAAATCTGACATCAATGCGATGGAGTCGCACCTGAGCCACGGAGAAAGGGAGAATCAACTAATGTCACAGAGAAATAACAACCTCAATGAGTACTACGAAAGTTTGCGAAATAACGTTATAACGTTGCTGGAGCATGTAAGAATTCCTGGAGGGGGGACTGTGCCAGTTACTTCAGCTCCCGGTACACCCGGTGCTCCCCAACCCCCTCCAGGTGAAAAACCGGCCCATGACAATTTTGATTCATATCTGACGAAATTGCAAACTCTGTGCTCACCAGACGGATACTGCCCTGACGAAAACCGGCCGATCTACGAAACGGTAAAGAATGCTCTCCAGGATTTCACAGTTCTCCCAACTCCGATTTAA
- Protein Sequence
- MNTFSALPQINKRRFEFGVDVEAFRIIDRQHNLGTSEESMEDEAVVKRRRRLLDDEQQDNTEERCRVYSTSSHHDFSRLNVNENYAHSHTIMKSTSSTWPEHPSPESGDENDDNEFENYFSDKRSDKMLPSSPSQSSESTDDSQKSFSLNNQLNEQERNDNEEENEKENNGAQQKPDTDGYDGGHRDSKNCNHYDATHFDDLVDSSSNELEIDMSDRNDDRYEDEKDIITKQKEIMSVNKQTLYNAYKAATASLPYSTQSAFKPPAEVKHKIHTNSFPSEPFGGYSNDHEKSSKVSKQYTILQPAGLGSRAASALHEARAVPSTQPTRDSRSLNPLSPTAAREGNKCPTPGCNGQGHVTGLYSHHRSLSGCPRKDKVTPEILALHETILKCPTPGCNGRGHVSSNRSTHRSLSGCPTAAARKAAARTQRARPIVLTAPIAAVATPAASTHTEVPATPQRREPEAAVSPRSPAVKHETPELLVPKREAAEPERDSPAMETRHAGYGAPPDQRSPYERPPDDHVRSYSQMNETRYGYEARCYEGATAFERYDPAQCPQRPYSWEEERYHDPHLPTPMKTDQSELESNSAPIYPRAMYHYEAGGAVGGVVALPPGVPPGFSAINLSVKIAAAQAQRPRTPTSRDPRDPRPAIDLSSSGGSPQGPYTSPVYTSAGGGSGGGARGSPQPGASPQLAASPQVPSPQGQTLDLSVTRLPHSRGFPGGVSYSRESTPDSGGSHPYLEAYHRDTAGYGGVSPHPVAGYGLPQDYAAATAGYGGYQYQCGPYPPPPAYPAHAPPYSPPCYMPPPHAPHDKPKDSSYQRDQYYGKLGYRARDSRDLIQCPVERCDGSGHISGNFATHRSLSGCPRADRSQLQPHSQELKCPTPGCDGSGHVTGNYSSHRSLSGCPRANKPKSKPRDGQDSEPLRCPIPGCDGSGHATGKFLSHRSASGCPIANRNKMRVLESGGTVEQHKAAVAAAASAIKFDGVNCPTPGCDGSGHINGSFLTHRSLSGCPVAGAATPTPQPKKAKYPDDITPLYPKPYSSMDINMQTGNGEDLMTLEQEITELQRENARVESQMMRLKSDINAMESHLSHGERENQLMSQRNNNLNEYYESLRNNVITLLEHVRIPGGGTVPVTSAPGTPGAPQPPPGEKPAHDNFDSYLTKLQTLCSPDGYCPDENRPIYETVKNALQDFTVLPTPI*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00875820; iTF_00874967; iTF_00420199; iTF_00421008; iTF_00771527; iTF_00115360; iTF_00358174; iTF_00710691; iTF_01194025; iTF_00431118; iTF_01074094;
- 90% Identity
- iTF_00875820; iTF_00874967;
- 80% Identity
- -