Basic Information

Insect: Leptidea sinapis
Gene Symbol: zfy1
Assembly: GCA_905404315.1
Location: FR990159.1:9053126-9078210[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.052 7 8.5 0.9 1 23 318 341 318 341 0.97

2 8 5.5e-06 0.00074 21.0 0.8 2 23 430 452 429 452 0.95

3 8 6.9e-05 0.0094 17.5 1.4 1 23 458 480 458 480 0.97

4 8 0.001 0.13 13.8 0.3 3 21 490 508 489 513 0.92

5 8 0.00017 0.023 16.3 2.2 1 23 521 544 521 544 0.93

6 8 0.00057 0.077 14.6 1.0 1 23 550 573 550 573 0.97

7 8 1.8e-07 2.5e-05 25.6 0.8 3 23 582 602 581 602 0.98

8 8 1.5e-06 0.0002 22.8 2.9 1 23 608 631 608 631 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.052	7	8.5	0.9	1	23	318	341	318	341	0.97
2	8	5.5e-06	0.00074	21.0	0.8	2	23	430	452	429	452	0.95
3	8	6.9e-05	0.0094	17.5	1.4	1	23	458	480	458	480	0.97
4	8	0.001	0.13	13.8	0.3	3	21	490	508	489	513	0.92
5	8	0.00017	0.023	16.3	2.2	1	23	521	544	521	544	0.93
6	8	0.00057	0.077	14.6	1.0	1	23	550	573	550	573	0.97
7	8	1.8e-07	2.5e-05	25.6	0.8	3	23	582	602	581	602	0.98
8	8	1.5e-06	0.0002	22.8	2.9	1	23	608	631	608	631	0.96

Sequence Information

Coding Sequence: ATGGAAGAACGAGAAAGTTTATTGTGTATTAGTTGTTTGTGTGTAGGCCGTACCTTAAAAGTGCTTCATGATGGGGAGTTaaagaaattttttattgaCGTTTTGAGAGAGGTTCCTctAGCAAATTTGAATTGTTTGGCTCCAGAAATTTGTTGGGAATGTGAAGCTATTATTAAGAAGTCATTAAGATTTCGTGAACAAGTGAAAGATTCATATAGAATATTACAGACCTACACCATAGAGAGTCTCCGAGACTATCTCCTGAGTGATGTATCTCGTCCACCAAGATTAAAAGTTTGTCATAATAAGCCAGTTCTGATATTACCCGATACTCATGATGAACACGATGAAATTAAGATTGAATACAAAGATgtGACAAACTTGGATGACAAAGAGTCTCAACAATCGGAATCTGATAATGACATAAATAAAGAAGAAGTTCCAACTGTTGTTTATGATGTCAAGTCGGAGTATAATATTAAAGACACAAATGAGGACGAACATACAACTTGTTTTATCAGTAGATATATTGGTGACAAACAAAATGTTGATGGCACATATTCAGAAGATAAAGCATCTCAACTGTACGGATCTGATGAAAATTTGTTTAGAGGAGAGATACAAACAGTAACATGTGATGTCAAACCGGAGTATAATTTAAGAAATGAATACAGTGATAGAGGTGGTATTGGAAATGGCGGTGAAAATATTACGAAACTGTGCCATGAAGATATTAAAGATGATATATTTACAGAAACTGATATTTTGATGACCAACGAAACAGAATCTACTGAAACTGGATACATTAAGTCACAAAATTATTGTCATGACAGCCGGCATGATATTCCAAAGTCAGTTCATAAACAAATTGTATCGAAAGTAATGTCACAAGGAGCAGTGTTGGAAAAGAGAAAGAAACAGACTCAAGATGAAATCTATATAAACTCTGATTACAAGTGTGACAGTTGTACTATCGGGTTTTTATCATTTTCGTCGTATAAGGCACACATGATTAGCAAACATTCATCGGACATAGACAAATATAAACTCGACAAGATTTGCAATACAGTAACTCCACCATTGGAAATGTCAACGTCGCACTACAAAGGACATATTATGACAAGATACGACTGCGGTGTTTGTCAGGAGCGGTCACTGGATGTTGACACTATCTGTGAACATCACGACACCACTCACACACATTTGCCAGATCCACGCGAAACTGAAAGTGAAACAGGGAAATGCGCCGACGTGTCTGTatCGTTGGAGACGCACAAGACCAGAATGCAGTGTAGCGATTGTGATAAAACATTCAGTCATCGAGCTGGACTTATGAACCATAGAATAGTTGTACAcgaatacaaaaatgaatttCCTTGTAATGTATGCAAGAAGGTGTTCAGGTGGAAGAACAGTCTTAAGCGACATCTGGAGAAGCACACAACTAATGAAGGTTCGGGTGGGTACTGCTCTGCGTGTGGCATCGGATTTTCGTCTGTGTCCTCGCTACAAAGGCATCTCAGGAACAGCTTGAAACACGTCACGCCAGACCAATTGAGATTTATATGCGACCACTGCAAACGCCGGTTCGCGGATAAGACAAAACTAAGAGACCATATCGAGGATAAACATCTGAACAGGACTACATACCAGTGCTACATTtgtcacaaaCCATCGAAGAGCCGGGTGGGGTTGGATCAACACATACGAAATGTACACAAGGGCAGaccgaataataaaatatgccaTTACTGTGGCAAGGGTTTTCCGACGAAGGTGCAGTTAGAATCTCACATACGCACCCACACTGGTGAACGGCCTTTCATATGTGAATACTGTCCCACAACATTCTCTCAACAGTCGAACCTCTACAAACATCACAGACAGGTCCATCAGAATATTAAAAAGAAGAAGGCTGTTGTAAAGAGAACCAAAGAGGAATGTCATGGAACTACAAGTCATGAAGATCCATCAATACCAATTGCCTTAATACAATACATGGCTTTACCAGATAGTGTCTTttcaatatga
Protein Sequence: MEERESLLCISCLCVGRTLKVLHDGELKKFFIDVLREVPLANLNCLAPEICWECEAIIKKSLRFREQVKDSYRILQTYTIESLRDYLLSDVSRPPRLKVCHNKPVLILPDTHDEHDEIKIEYKDVTNLDDKESQQSESDNDINKEEVPTVVYDVKSEYNIKDTNEDEHTTCFISRYIGDKQNVDGTYSEDKASQLYGSDENLFRGEIQTVTCDVKPEYNLRNEYSDRGGIGNGGENITKLCHEDIKDDIFTETDILMTNETESTETGYIKSQNYCHDSRHDIPKSVHKQIVSKVMSQGAVLEKRKKQTQDEIYINSDYKCDSCTIGFLSFSSYKAHMISKHSSDIDKYKLDKICNTVTPPLEMSTSHYKGHIMTRYDCGVCQERSLDVDTICEHHDTTHTHLPDPRETESETGKCADVSVSLETHKTRMQCSDCDKTFSHRAGLMNHRIVVHEYKNEFPCNVCKKVFRWKNSLKRHLEKHTTNEGSGGYCSACGIGFSSVSSLQRHLRNSLKHVTPDQLRFICDHCKRRFADKTKLRDHIEDKHLNRTTYQCYICHKPSKSRVGLDQHIRNVHKGRPNNKICHYCGKGFPTKVQLESHIRTHTGERPFICEYCPTTFSQQSNLYKHHRQVHQNIKKKKAVVKRTKEECHGTTSHEDPSIPIALIQYMALPDSVFSI*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00875598;
90% Identity: iTF_00875598;
80% Identity: -